Information report for AT5G13740
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009006 — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
- GO:0009624 — acts upstream of or within — response to nematode
- GO:0005739 — located in — mitochondrion
- GO:0055085 — involved in — transmembrane transport
- GO:0009705 — located in — plant-type vacuole membrane
- GO:0090333 — involved in — regulation of stomatal closure
- GO:0009705 — is active in — plant-type vacuole membrane
- GO:0005886 — is active in — plasma membrane
- GO:0022857 — enables — transmembrane transporter activity
- GO:0005737 — located in — cytoplasm
- GO:0006882 — involved in — intracellular zinc ion homeostasis
- GO:0022821 — enables — solute:potassium antiporter activity
- GO:0010043 — acts upstream of or within — response to zinc ion
Functional Keywords
- root , root , root , shoot system
Literature and News
- Monitoring genome-wide changes in gene expression in response to endogenous cytokinin reveals targets in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(03)01194-3 ; PMID: 14623097
- Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis. DOI: 10.1105/tpc.104.022830 ; PMID: 15258262
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- Isolation and characterization of flower-specific transcripts in Acacia mangium. DOI: 10.1093/treephys/25.2.167 ; PMID: 15574398
- Nematode-induced changes of transporter gene expression in Arabidopsis roots. DOI: 10.1094/MPMI-18-1247 ; PMID: 16478044
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Quantitative trait locus mapping for seed mineral concentrations in two Arabidopsis thaliana recombinant inbred populations. DOI: 10.1111/j.1469-8137.2008.02544.x ; PMID: 18631293
- The bHLH transcription factor POPEYE regulates response to iron deficiency in Arabidopsis roots. DOI: 10.1105/tpc.110.074096 ; PMID: 20675571
- Vacuolar nicotianamine has critical and distinct roles under iron deficiency and for zinc sequestration in Arabidopsis. DOI: 10.1105/tpc.111.095042 ; PMID: 22374397
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Alteration of iron responsive gene expression in Arabidopsis glutaredoxin S17 loss of function plants with or without iron stress. DOI: 10.1080/15592324.2020.1758455 ; PMID: 32351167
- Altered metal distribution in the sr45-1 Arabidopsis mutant causes developmental defects. DOI: 10.1111/tpj.15740 ; PMID: 35305053
- A novel major facilitator superfamily protein at the tonoplast influences zinc tolerance and accumulation in Arabidopsis. DOI: 10.1104/pp.106.092015 ; PMID: 17277087
Gene Resources
- UniProt: A0A654G0R7
- EMBL: CACRSJ010000110, LR881470
- AlphaFoldDB: A0A654G0R7
- EnsemblPlants: AT5G13740.1
- Gramene: AT5G13740.1
- KEGG: ath:AT5G13740
- Orthologous matrix: AWWACGI
- ExpressionAtlas: AT5G13740
- InterPro: IPR001958, IPR011701, IPR020846
- PANTHER: PTHR23504, PTHR23504:SF102
- SUPFAM: SSF103473
- PROSITE: PS50850
- Gene3D: 1.20.1250.20
- Conserved Domain Database: cd17330
Sequences
cDNA Sequence
- >AT5G13740.1
AACCACATTTGGATGGATTGGTGAAAAACAAAATTGCGGGTGGAGGAGGTCCGTGAACATGTGACGAGATTAAAATGACACTTGGGTGACCACCTTTTTGGCCCTCTTTAGCTCCAAGGCTATATATATATATATGCATACATCCATCCATTTGTACATATATACGTGACTCATCGTCTTTTTCACTCCCACACGTTCTGCTCCAGCGATACTGTGAGAGAATCTCTGTGTGGTTCTGAATTCTTAGGCTGGAATTGAATTCTGAAATGGCGGAGGAGTACAAGGAAGCGTTGTTGGAGAAGCAGAACTATCACGACGGATGTCCCGGCTGTAAGGTGGAGCAGATGAAGCAGCTCCGGCGAGGATATCCTTACCTCGAGCTTTCCTTCGTTTGGATTATCGTCCTCTCCACTTCTCTACCAATTTCCTCACTCTATCCCTTCCTCTACTATATGATTGAGGATTTTGGTGTCGCAAAGACGGAGAAAGATATTGGGTTTTATGCTGGTTTTGTTGGTTGCTCTTTTATGCTTGGAAGAGCACTGACTTCTGTGTTCTGGGGAATTGTGGCTGATCGTTATGGAAGAAAACCCATTATACTCTTGGGAACTATCTCAATTGCAATTTTCAACGCTCTTTTTGGCTTGAGCTCAAATTTTTGGATGGCAATTGGCACAAGGTTTCTTCTTGGGAGTTTCAACTGTTTGCTTGGAACAATGAAGGCCTATGCATCAGAAATATTTCGTGATGAATATCAAGCTACCGCAATGTCAGCTGTTAGTACTGCTTGGGGCATTGGACTGATCATTGGCCCTGCTCTTGGTGGTTTTTTAGCTCAGCCGGCAGACAAATATCCAAATGTGTTCTCCCAAGAATCTCTTTTTGGCAGATTCCGGTATGCATTGCCTTGCTTTACGATTTCAGCTTTTGCCTTGCTTGTGACAGTACTATGCTGCTTCATCCCGGAGACACTGCACAATCATAAGCTGGACAGCTTATCACATGATGATTCATACGATATACTTGAAGCTGCATCTCATGAATCATCTCCTTCTACCGGGAAGGCAGGAAAAAACGAAAGAAAGGCTTCTCAGTCTCTCTTGAAGAATTGGCCGCTGATGTCATCTATCATTGTGTATTGTGTTCTGTGTCTTCATGATACTGCATACTCGGAGATATTTGCACTATGGGCTAACAGTCCAAGGAAGTATGGAGGTCTGAGCTACTCAACGAATGAAGTCGGTACAGTTCTTGCTATCTCAGGTCTCGGCCTATTCTCTTTTCAGGTATTTGTTTATCCTTTGGCTGAGAAACTGCTAGGACCTGTTCTGGTCACCCGATATGCTGGGGCACTGATGATACCTATACAAATGAGTTATCCATTTATAGCAGGCTTGTCAGGTCTCAGTCTAAGCTTGATGTTAAATTGTGCATCAATCCTCATAAATGTCTTAAGTGTGTCTGCCATAACCGGCCTGTTGATCCTTCAAAATAGAGCAGTGGATCAGAGCCAAAGAGGGGCGGCTAATGGAATAGCTATGACTGCGATGTCTCTATTTAAGACAGTTGGACCAGCTGGTGCTGGCATCTTATTTTCTTGGAGTGAGAGGCGACTAAACGCTGCATTTCTACCAGGATCGCATATGGTATTCTTCGTCTTGAATGTGATAGTAGTGGTCGGAGTAGCTCTGACATTCAAGCCATTTCTAACGACGAGTCGAAGATGAAATTCATTTGAATTGGTAAGATAGGGAATGTATGGACAAGTTGATTCTTTTCATTTCAGATACGAAAGAAACCGGTAATAAAATTTCACTAACCTTAGGATTTCAGCTCCTTCTATTACTTGTCCTTTTGTTTTGCTTTGTCTGATTATTATACACCAAAACCGCTTTCATAATCGTGGATCCCATCCAAAAGTGATGTATTAATCGGTTAACAAATCGTATGGTCAGTCAATACGGCAGTAAGGAAATTAGAAGATGAGACTGAGAGGAACTTACTTGAACCGTTAATTTATTATTTAATACAAACCGTGGCCTATTTTTCAAGCTCTTCAAAAGGCATTACTCAACCTTTACTTGATGAATAACATTTACTCAAATAAATAATTTTACAAATTTTCTGCCGACCTCTCCTTGGCCTTATTCACAGCAAGCGGAGCCTTATGTCCAAACAATTTAGTACGATTTGACTGATTTAAAATAACCTTCTCTATTCAGCTTTGGCTATGATTGTATATTGTTAGCAGCCATGAAACCTAGTCAAACTAACTGGTTTGGGATAGGCAGATAGTCAAAATGGTTAAAGCCGGCATGATTGGCTTCCATTTTTCCTAAACTGAAATTGTTTTAATTAAAATTTGAAAAATAATAGGTAGATTTTGAAGATG - >AT5G13740.2
AACCACATTTGGATGGATTGGTGAAAAACAAAATTGCGGGTGGAGGAGGTCCGTGAACATGTGACGAGATTAAAATGACACTTGGGTGACCACCTTTTTGGCCCTCTTTAGCTCCAAGGCTATATATATATATATGCATACATCCATCCATTTGTACATATATACGTGACTCATCGTCTTTTTCACTCCCACACGTTCTGCTCCAGCGATACTGTGAGAGAATCTCTGTGTGGTTCTGAATTCTTAGGCTGGAATTGAATTCTGAAATGGCGGAGGAGTACAAGGAAGCGTTGTTGGAGAAGCAGAACTATCACGACGGATGTCCCGGCTGTAAGGTGGAGCAGATGAAGCAGCTCCGGCGAGGATATCCTTACCTCGAGCTTTCCTTCGTTTGGATTATCGTCCTCTCCACTTCTCTACCAATTTCCTCACTCTATCCCTTCCTCTACTATATGATTGAGGATTTTGGTGTCGCAAAGACGGAGAAAGATATTGGGTTTTATGCTGGTTTTGTTGGTTGCTCTTTTATGCTTGGAAGAGCACTGACTTCTGTGTTCTGGGGAATTGTGGCTGATCGTTATGGAAGAAAACCCATTATACTCTTGGGAACTATCTCAATTGCAATTTTCAACGCTCTTTTTGGCTTGAGCTCAAATTTTTGGATGGCAATTGGCACAAGGTTTCTTCTTGGGAGTTTCAACTGTTTGCTTGGAACAATGAAGGCCTATGCATCAGAAATATTTCGTGATGAATATCAAGCTACCGCAATGTCAGCTGTTAGTACTGCTTGGGGCATTGGACTGATCATTGGCCCTGCTCTTGGTGGTTTTTTAGCTCAGCCGGCAGACAAATATCCAAATGTGTTCTCCCAAGAATCTCTTTTTGGCAGATTCCGGTATGCATTGCCTTGCTTTACGATTTCAGCTTTTGCCTTGCTTGTGACAGTACTATGCTGCTTCATCCCGGAGACACTGCACAATCATAAGCTGGACAGCTTATCACATGATGATTCATACGATATACTTGAAGCTGCATCTCATGAATCATCTCCTTCTACCGGGAAGGCAGGAAAAAACGAAAGAAAGGCTTCTCAGTCTCTCTTGAAGAATTGGCCGCTGATGTCATCTATCATTGTGTATTGTGTTCTGTGTCTTCATGATACTGCATACTCGGAGATATTTGCACTATGGGCTAACAGTCCAAGGAAGTATGGAGGTCTGAGCTACTCAACGAATGAAGTCGGTACAGTTCTTGCTATCTCAGGTCTCGGCCTATTCTCTTTTCAGGTATTTGTTTATCCTTTGGCTGAGAAACTGCTAGGACCTGTTCTGGTCACCCGATATGCTGGGGCACTGATGATACCTATACAAATGAGTTATCCATTTATAGCAGGCTTGTCAGGTCTCAGTCTAAGCTTGATGTTAAATTGTGCATCAATCCTCATAAATGTCTTAAGTGTGTCTGCCATAACCGGCCTGTTGATCCTTCAAAATAGAGCAGTGGATCAGAGCCAAAGAGGGGCGGCTAATGGAATAGCTATGACTGCGATGTCTCTATTTAAGACAGTTGGACCAGCTGGTGCTGGCATCTTATTTTCTTGGAGTGAGAGGCGACTAAACGCTGCATTTCTACCAGGATCGCATATGGTATTCTTCGTCTTGAATGTGATAGTAGTGGTCGGAGTAGCTCTGACATTCAAGCCATTTCTAACGACGAGTCGAAGATGAAATTCATTTGAATTGGTAAGATAGGGAATGTATGGACAAGTTGATTCTTTTCATTTCAGATACGAAAGAAACCGGTAATAAAATTTCACTAACCTTAGGATTTCAGCTCCTTCTATTACTTGTCCTTTTGTTTTGCTTTGTCTGATTATTATACACCAAAACCGCTTTCATAATCGTGGATCCCATCCAAAAGTGATGTATTAATCGGTTAACAAATCGTATGGTCAGTCAATACGGCAGTAAGGAAATTAGAAGATGAGACTGAGAGGAACTTACTTGAACCGTTAATTTATTATTTAATACAAACCGTGGCCTATTTTTCAAGCTCTTCAAAAGGCATTACTCAACCTTTACTTGATGAATAACATTTACTCAAATAAATAATTTTACAAATTTTCTGCCGACCTCTCCTTGGCCTTATTCACAGCAAGCGGAGCCTTATGTCCAAACAATTTAGTACGATTTGACTGATTTAAAATAACCTTCTCTATTCAGCTTTGGCTATGATTGTATATTGTTAGCAGCCATGAAACCTAGTCAAACTAACTGGTTTGGGATAGGCAGATAGTCAAAATGGTTAAAGCCGGCATGATTGGCTTCCATTTTTCCTAAACTGAAATTGTTTTAATTAAAATTTGAAAAATAATAGGTAGATTTTGAAGATG
CDS Sequence
Protein Sequence