Gene Details:

• Gene ID: AT5G13650
• Gene Symbol: SVR3
• Gene Name: SUPPRESSOR OF VARIEGATION 3
• Description: elongation factor family protein;(source:Araport11)
• TAIR Accession: locus:2173169
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G13650.1     AT5G13650.2

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0009409  — involved in — response to cold
• GO:0009570  — located in — chloroplast stroma
• GO:0000302  — acts upstream of or within — response to reactive oxygen species
• GO:0005525  — enables — GTP binding
• GO:0006364  — involved in — rRNA processing
• GO:0005829  — is active in — cytosol
• GO:0009507  — located in — chloroplast
• GO:0031425  — acts upstream of or within — chloroplast RNA processing
• GO:0003924  — enables — GTPase activity
• GO:0009536  — located in — plastid
• GO:1990904  — part of — ribonucleoprotein complex
• GO:0050821  — involved in — protein stabilization
• GO:0003729  — enables — mRNA binding
• GO:0010468  — acts upstream of or within — regulation of gene expression

Function-related keywords:

• root

Literature:

• Transcriptional profiling by cDNA-AFLP and microarray analysis reveals novel insights into the early response to ethylene in Arabidopsis.   DOI:  10.1111/j.1365-313X.2004.02156.x ;  PMID:  15272873
• Analysis of transposon insertion mutants highlights the diversity of mechanisms underlying male progamic development in Arabidopsis.   DOI:  10.1534/genetics.104.030270 ;  PMID:  15342534
• The metabolic response of heterotrophic Arabidopsis cells to oxidative stress.   DOI:  10.1104/pp.106.090431 ;  PMID:  17122072
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• A var2 leaf variegation suppressor locus, SUPPRESSOR OF VARIEGATION3, encodes a putative chloroplast translation elongation factor that is important for chloroplast development in the cold.   DOI:  10.1186/1471-2229-10-287 ;  PMID:  21187014
• Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm.   DOI:  10.1007/s12192-012-0398-3 ;  PMID:  23334891
• Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.   DOI:  10.3390/biom10040661 ;  PMID:  32344669
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481
• Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis.   DOI:  10.1104/pp.108.124545 ;  PMID:  18633119
• The oligomeric stromal proteome of Arabidopsis thaliana chloroplasts.   DOI:  10.1074/mcp.M500180-MCP200 ;  PMID:  16207701
• Sorting signals, N-terminal modifications and abundance of the chloroplast proteome.   DOI:  10.1371/journal.pone.0001994 ;  PMID:  18431481

Sequences: