Gene Details:
- Gene ID: AT5G13610
- Gene Symbol: RRL
- Gene Name: RETARDED ROOT GROWTH-LIKE
- Description: sporulation RMD1-like protein, putative (DUF155);(source:Araport11)
- TAIR Accession: locus:2173214
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0009738 — acts upstream of or within — abscisic acid-activated signaling pathway
- GO:0005739 — located in — mitochondrion
- GO:0031930 — acts upstream of or within — mitochondria-nucleus signaling pathway
- GO:0007005 — acts upstream of or within — mitochondrion organization
- GO:0005737 — located in — cytoplasm
- GO:0003674 — enables — molecular_function
Germplasm Phenotype:
- SALK_022878C — Seedlings screened in bulk via high throughput methods for responses to various stressors. Results are in comparison to Col-0.heat:no change,cold:no change,oxidative stress:no change,osmotic stress:no change,salt stress:no change,ABA:no change,hypoxia:no change.
- rrl — Decreased ABA responsiveness in seed germination and primary root growth.
Function-related keywords:
Literature:
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- An Arabidopsis mitochondria-localized RRL protein mediates abscisic acid signal transduction through mitochondrial retrograde regulation involving ABI4. DOI: 10.1093/jxb/erv356 ; PMID: 26163700
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
Sequences:
cDNA Sequence
- >AT5G13610.1
AAACAAGTATTAATAATTCTGCTATTAGGCAGAGAGAGGGCGGCTCTGTTGTTGATCTTCTTCTCCGGTGACTCTTACTCTCTGTGTAAAAAAGCAAAATGATGCGTTCCGTTGACGTCTACGTGAAAACTCTAGGCCCTCCCGTCCGTTCAATTCTCTACTCGATCTTTACCTCTCAGCAAAAACCTTCGTCGCTGCCTTCGCTTCCATTTCACTTTTCGTTGCGTTCGTCGTCGAATATTCCCACTCGTTGTTTCTCCAATGTCGTTGCGAAATCCAATTCTCCGATTTACGATTTTCAAGGATTCCGAAATCTCTTCACTGAGAGGGCTATCTCTTCGTCTACGACGACCCCCGTCGCTTCTGCTCAGCCGCAGCAGCTTCAGAATCAGAATCAGCATCCAGCTGAGGTTGATGAAGAGATTTCTATGGGCTTAGAGGACGAAGCCAAGCTTTCTATTCCTGTGCGAGCTTATTTCTTCTCCACTAGCGTTGATTTGAGAAGCTTAATAGAGCAGAACAAGCAGAACTTCATCCCACCTACTTCGCGTATGACTAACTATGTTGTTCTTAAGTTTGGCAATCATTCTGATCCCACTGATACTACTCGAGGACGCATAAGTGGGAGTGAGTCTATTTACATGGTAGTATTTCATTATGGATCGATTGTCTTGTTTAATGTAAGGGAACATGAGGTTGATGAATATCTTAAAGTAGTGGAGAGGCATGCCTCTGGGTTGCTTCCAGAAATGAGAAAAGATGAATATGAAGTAAGAGAGAATCCAAATCTGGACACATGGATGGAGGTAGGACGGGATTTTATCAGGTTGCAGTTCTTGAATACTGATGGGATCAGAACCATAGGATGTGTTCTGGGCCAGAGTATTGCTCTGGATTACTATGGCCGGCAGGTTGATGGTATGGTAGCAGAATTTACTGAGATAAACCGTCAGTTGGAGATAACAGGAACGTTTACAATGAAAAGGAAAAAGCTGTTCCAGTTGGTTGGAAAGGCTAATGTGATTCTGGCTGATGTGATTCTGAAGCTTGGTCTTTTTGAGAGGTCAGATATAGCTTGGAAGGATGCGAAATATGGTCAGATATGGGAGTTTCTGAGAGATGAATTTGAACTGACACAGAGTTTTGCAAACCTTGATTATAAGCTCAAGTTTGTAGAGCACAACGTTCGTTTCCTTCAAGAAATACTTCAGAACAGGAAATCAGCTACTCTGGAGTGGCTAATCATTATCCTGATTAGTATGGAGATCGCGATTTCTTTCTATAATATGTCTCGGGCATCCTTGTGATCGAGATCATCCTCTGCCATTTCTAAAGCATATTCATATTCTTTATTATGGTTACCACTTTTCTTCACAATGCAAAGTGATAACTTTATAACAAAGCTCATAAATAAGAATGAGTTTAGGAGTTAGGACTACGTTTGTTACAGATTCTCTTTGCATTTAAGAGCCTGCTTCTTTTCAGTCCAACAAGACTTGGTTATGCATATAAAATCATTTATTTCACAGGTGCAAGCCTTCTTTTAATTTCAATTTCAATGTAGTGTTGTTATATTAATAAAAGTGAAATTACGAAGC
CDS Sequence
Protein Sequence