Gene Details:

• Gene ID: AT5G13580
• Gene Symbol: ABCG6, JAT3
• Gene Name: ATP-binding cassette G6, JASMONIC ACID TRANSPORTER 3
• Description: ABC-2 type transporter family protein;(source:Araport11)
• TAIR Accession: locus:2173184
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G13580.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0055085  — involved in — transmembrane transport
• GO:0140359  — enables — ABC-type transporter activity
• GO:0042626  — enables — ATPase-coupled transmembrane transporter activity
• GO:0005886  — located in — plasma membrane
• GO:0016020  — is active in — membrane
• GO:0010345  — acts upstream of or within — suberin biosynthetic process
• GO:1903825  — acts upstream of or within — organic acid transmembrane transport
• GO:0009624  — acts upstream of or within — response to nematode
• GO:0016887  — enables — ATP hydrolysis activity

Germplasm Phenotype:

• atjat3-1  — lower amount of 3H-JA
• atjat3-1;4-1  — Strong decrease of 3H-JA retention; wound-induced JA burst in the distal leaves was significantly decreased.

Function-related keywords:

• root ,  root

Literature:

• The Arabidopsis thaliana ABC protein superfamily, a complete inventory.   DOI:  10.1074/jbc.M103104200 ;  PMID:  11346655
• Nematode-induced changes of transporter gene expression in Arabidopsis roots.   DOI:  10.1094/MPMI-18-1247 ;  PMID:  16478044
• cGMP modulates gene transcription and cation transport in Arabidopsis roots.   DOI:  10.1111/j.1365-313X.2005.02616.x ;  PMID:  16460505
• Genome-wide analysis of ATP-binding cassette (ABC) proteins in a model legume plant, Lotus japonicus: comparison with Arabidopsis ABC protein family.   DOI:  10.1093/dnares/dsl013 ;  PMID:  17164256
• Plant ABC proteins–a unified nomenclature and updated inventory.   DOI:  10.1016/j.tplants.2008.02.001 ;  PMID:  18299247
• Acyl-lipid metabolism.   DOI:  10.1199/tab.0161 ;  PMID:  23505340
• ABCG transporters are required for suberin and pollen wall extracellular barriers in Arabidopsis.   DOI:  10.1105/tpc.114.129049 ;  PMID:  25217507
• Root Suberin Plays Important Roles in Reducing Water Loss and Sodium Uptake in Arabidopsis thaliana.   DOI:  10.3390/metabo11110735 ;  PMID:  34822393
• Disruption of the ABA1 encoding zeaxanthin epoxidase caused defective suberin layers in Arabidopsis seed coats.   DOI:  10.3389/fpls.2023.1156356 ;  PMID:  37008500

Sequences: