Information report for AT5G13500
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0000138 — located in — Golgi trans cisterna
- GO:0033993 — acts upstream of or within — response to lipid
- GO:0036211 — acts upstream of or within — protein modification process
- GO:0010015 — acts upstream of or within — root morphogenesis
- GO:0005768 — located in — endosome
- GO:0005794 — located in — Golgi apparatus
- GO:0005802 — located in — trans-Golgi network
- GO:0016757 — enables — glycosyltransferase activity
- GO:0009888 — acts upstream of or within — tissue development
- GO:1990585 — enables — hydroxyproline O-arabinosyltransferase activity
- GO:0098542 — acts upstream of or within — defense response to other organism
- GO:0048589 — acts upstream of or within — developmental growth
- GO:0016051 — acts upstream of or within — carbohydrate biosynthetic process
- GO:0044281 — acts upstream of or within — small molecule metabolic process
- frh1 hpat1 hpat3 — Fertility increased relative to hpt1/hpt3 double mutant alone.Suppression of hpt1/hpt3 phenotype. Increased silique length and seed set due to increased pollen germination and pollen tube growth.
- hpat 123 — Short siliques, reduced fertility. Defects in transmission through pollen due to defects in pollen tube growth.
- hpat1 hpat3 — Short siliques, reduced fertility. Defects in transmission through pollen due to defects in pollen tube growth.
- sec15a hpat1 hpat3 — Fertility increased relative to hpt1/hpt3 double mutant alone.Suppression of hpt1/hpt3 phenotype. Increased silique length and seed set due to increased pollen germination and pollen tube growth.
Functional Keywords
Literature and News
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Identification of three hydroxyproline O-arabinosyltransferases in Arabidopsis thaliana. DOI: 10.1038/nchembio.1351 ; PMID: 24036508
- Hydroxyproline O-arabinosyltransferase mutants oppositely alter tip growth in Arabidopsis thaliana and Physcomitrella patens. DOI: 10.1111/tpj.13079 ; PMID: 26577059
- Exocyst mutants suppress pollen tube growth and cell wall structural defects of hydroxyproline O-arabinosyltransferase mutants. DOI: 10.1111/tpj.14808 ; PMID: 32391581
- Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. DOI: 10.1105/tpc.19.00081 ; PMID: 31266899
Gene Resources
- UniProt: A0A384L0E0
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A384L0E0
- EnsemblPlants: AT5G13500.1, AT5G13500.2, AT5G13500.3
- Gramene: AT5G13500.1, AT5G13500.2, AT5G13500.3
- KEGG: ath:AT5G13500
- Orthologous matrix: AQPPWDK
- ExpressionAtlas: AT5G13500
- InterPro: IPR044845, IPR056508
- PANTHER: PTHR31485, PTHR31485:SF36
- OrthoDB: A0A384L0E0
Sequences
cDNA Sequence
- >AT5G13500.1
CAAATCTCAAGTTGTATTATTACCCAACTTACCAAAAAAAAAAGCAGTATTATTGCCCATACTAATTTCTAAAGCATGTTAATTATGTGTGCTAACTTCGATTCACGTATTAGGTTTTTCTTCTTTAATATTCCATGTTTTTTTCTTAAACGTGGTATGCCACAACACTTGCACTTCCTATATTTTTTTCCTGAAATTATATTCAAAGCCATCAGGAGAATTCTTTGGTTTTGATTGGCACGATCCAAAGACACACATTTTGTCAAATCATTTTCGACGACTGTTATTAATAATTAATTCGTTAATGACGCACCGTTAGTCAACTCCGCTTCGTATTAATTACTCCTCCGATCTCTTTCTTATTCTTCTCCGGCGACACTTCCCTTGCTTCTCCCTCTTAGGACTCTCTCTACGAATCTGTAAGCTTCAAATTCTTACGCCACACTCCGAGATTCGCTTCTGATTATTGTATGAATTTTTGAGCTCCAAGGATCCACTGCCATGTATTTATGCTGCTAAAGCTTGAAGGCAGTAGTGGAATCACCATTAAGTTCTTTGCTTTGTAATTTAGCTTGATTTGAGAATAAACAAATGGGAAAAGCATCAGGCTTGCTTCTGTTTCTCTTGGGTTTTGGGTTCTTTGTTGTCACATATAATCTTCTGACACTTATAGTTCACAATAGATCTGGTGTGAGTAATTCAGATGGAAGTCCACTTCTGGATCCTGTTGTTCAGATGCCTCTAAATATTAGGAAAGCCAAGAGTTCTCCAGCACCTTTTCATGTTGCCTTAACAGCTACAGATGCACCTTATAATAAGTGGCAGTGTCGTATTATGTATTATTGGTATAAGCAGAAGAAAGCTCTTCCTGGTTCTGATATGGGTGGCTTCACCCGTATTTTGCATTCCGGTAATTCTGATAACTTGATGGATGAAATACCCACATTTGTGGTTGATCCTCTTCCTCCAGGTCTTGATCGGGGGTATGTTGTCTTGAATAGACCATGGGCATTCGTGCAATGGCTTGAAAGAGCTACCATCAAGGAAGACTATGTGCTCATGGCAGAGCCTGATCATGTATTTGTTAATCCCCTTCCCAATTTGGCTGTTGGAGGATTCCCAGCCGCTTTTCCGTTTTTCTATATTACTCCTGAAAAGTATGAAAACATAGTCAGAAAGTATTATCCAGCGGAGATGGGGCCAGTAACAAATATCGACCCCATTGGCAACTCTCCTGTTATCATAAGCAAGGAATCACTTGAAAAGATTGCTCCTACATGGATGAATGTCTCGCTGACAATGAAAAACGATCCAGAAACTGATAAGGCATTTGGATGGGTGCTGGAAATGTACGGTTACGCAATTGCATCTGCTATACATGGGGTGCGTCACATACTTCGGAAGGATTTCATGCTTCAGCCTCCGTGGGATTTGTCTACCAAGGGGAAGTTTATCATTCATTACACTTATGGATGCGACTACAACATGAAGGGGGAGCTGACATATGGCAAAATAGGAGAGTGGCGATTCGATAAGAGATCACATTTGCGGGGTCCTCCTCCAAGGAACATGTCCTTGCCGCCTCCCGGTGTTCCCGAAAGTGTGGTGACACTTGTGAAGATGGTGAATGAAGCTACTGCGACTATCCCTAATTGGGACACTCTCTAACTCACATCCACACACAAAACACAAACCATAGGGACAAATCCATACAGCAACAATATTTTGCCTAATTTTTTTTTCCTTCTCCCTTTACTTCCCTTCTTGTCTGTTTTTTCTTGTAATGGTTAAATTATGAACTTGAGTAGTAAATTACAAAATTATTTGTTTGACACGAGACGAGACATCTTCCATAATTCCGAGAAAGAAAATAGAATTATTTTGGGTCTAGTTATTTGATTAGTTTACCAATGGATTGCGTTCAGAATT - >AT5G13500.3
CAAATCTCAAGTTGTATTATTACCCAACTTACCAAAAAAAAAAGCAGTATTATTGCCCATACTAATTTCTAAAGCATGTTAATTATGTGTGCTAACTTCGATTCACGTATTAGGTTTTTCTTCTTTAATATTCCATGTTTTTTTCTTAAACGTGGTATGCCACAACACTTGCACTTCCTATATTTTTTTCCTGAAATTATATTCAAAGCCATCAGGAGAATTCTTTGGTTTTGATTGGCACGATCCAAAGACACACATTTTGTCAAATCATTTTCGACGACTGTTATTAATAATTAATTCGTTAATGACGCACCGTTAGTCAACTCCGCTTCGTATTAATTACTCCTCCGATCTCTTTCTTATTCTTCTCCGGCGACACTTCCCTTGCTTCTCCCTCTTAGGACTCTCTCTACGAATCTGTAAGCTTCAAATTCTTACGCCACACTCCGAGATTCGCTTCTGATTATTGTATGAATTTTTGAGCTCCAAGGATCCACTGCCATGTATTTATGCTGCTAAAGCTTGAAGGCAGTAGTGGAATCACCATTAAGTTCTTTGCTTTGTAATTTAGCTTGATTTGAGAATAAACAAATGGGAAAAGCATCAGGCTTGCTTCTGTTTCTCTTGGGTTTTGGGTTCTTTGTTGTCACATATAATCTTCTGACACTTATAGTTCACAATAGATCTGGTGTGAGTAATTCAGATGGAAGTCCACTTCTGGATCCTGTTGTTCAGATGCCTCTAAATATTAGGAAAGCCAAGAGTTCTCCAGCACCTTTTCATGTTGCCTTAACAGCTACAGATGCACCTTATAATAAGTGGCAGTGTCGTATTATGTATTATTGGTATAAGCAGAAGAAAGCTCTTCCTGGTTCTGATATGGGTGGCTTCACCCGTATTTTGCATTCCGGTAATTCTGATAACTTGATGGATGAAATACCCACATTTGTGGTTGATCCTCTTCCTCCAGGTCTTGATCGGGGGTATGTTGTCTTGAATAGACCATGGGCATTCGTGCAATGGCTTGAAAGAGCTACCATCAAGGAAGACTATGTGCTCATGGCAGAGCCTGATCATGTATTTGTTAATCCCCTTCCCAATTTGGCTGTTGGAGGATTCCCAGCCGCTTTTCCGTTTTTCTATATTACTCCTGAAAAGTATGAAAACATAGTCAGAAAGTATTATCCAGCGGAGATGGGGCCAGTAACAAATATCGACCCCATTGGCAACTCTCCTGTTATCATAAGCAAGGAATCACTTGAAAAGATTGCTCCTACATGGATGAATGTCTCGCTGACAATGAAAAACGATCCAGAAACTGATAAGGCATTTGGATGGGTGCTGGAAATGTACGGTTACGCAATTGCATCTGCTATACATGGGGTGCGTCACATACTTCGGAAGGATTTCATGCTTCAGCCTCCGTGGGATTTGTCTACCAAGGGGAAGTTTATCATTCATTACACTTATGGATGCGACTACAACATGAAGGGGGAGCTGACATATGGCAAAATAGGAGAGTGGCGATTCGATAAGAGATCACATTTGCGGGGTCCTCCTCCAAGGAACATGTCCTTGCCGCCTCCCGGTGTTCCCGAAAGTGTGGTGACACTTGTGAAGATGGTGAATGAAGCTACTGCGACTATCCCTAATTGGGACACTCTCTAACTCACATCCACACACAAAACACAAACCATAGGGACAAATCCATACAGCAACAATATTTTGCCTAATTTTTTTTTCCTTCTCCCTTTACTTCCCTTCTTGTCTGTTTTTTCTTGTAATGGTTAAATTATGAACTTGAGTAGTAAATTACAAAATTATTTGTTTGACACGAGACGAGACATCTTCCATAATTCCGAGAAAGAAAATAGAATTATTTTGGGTCTAGTTATTTGATTAGTTTACCAATGGATTGCGTTCAGAATT - >AT5G13500.2
CAAATCTCAAGTTGTATTATTACCCAACTTACCAAAAAAAAAAGCAGTATTATTGCCCATACTAATTTCTAAAGCATGTTAATTATGTGTGCTAACTTCGATTCACGTATTAGGTTTTTCTTCTTTAATATTCCATGTTTTTTTCTTAAACGTGGTATGCCACAACACTTGCACTTCCTATATTTTTTTCCTGAAATTATATTCAAAGCCATCAGGAGAATTCTTTGGTTTTGATTGGCACGATCCAAAGACACACATTTTGTCAAATCATTTTCGACGACTGTTATTAATAATTAATTCGTTAATGACGCACCGTTAGTCAACTCCGCTTCGTATTAATTACTCCTCCGATCTCTTTCTTATTCTTCTCCGGCGACACTTCCCTTGCTTCTCCCTCTTAGGACTCTCTCTACGAATCTGTAAGCTTCAAATTCTTACGCCACACTCCGAGATTCGCTTCTGATTATTGTATGAATTTTTGAGCTCCAAGGATCCACTGCCATGTATTTATGCTGCTAAAGCTTGAAGGCAGTAGTGGAATCACCATTAAGTTCTTTGCTTTGTAATTTAGCTTGATTTGAGAATAAACAAATGGGAAAAGCATCAGGCTTGCTTCTGTTTCTCTTGGGTTTTGGGTTCTTTGTTGTCACATATAATCTTCTGACACTTATAGTTCACAATAGATCTGGTGTGAGTAATTCAGATGGAAGTCCACTTCTGGATCCTGTTGTTCAGATGCCTCTAAATATTAGGAAAGCCAAGAGTTCTCCAGCACCTTTTCATGTTGCCTTAACAGCTACAGATGCACCTTATAATAAGTGGCAGTGTCGTATTATGTATTATTGGTATAAGCAGAAGAAAGCTCTTCCTGGTTCTGATATGGGTGGCTTCACCCGTATTTTGCATTCCGGTAATTCTGATAACTTGATGGATGAAATACCCACATTTGTGGTTGATCCTCTTCCTCCAGGTCTTGATCGGGGGTATGTTGTCTTGAATAGACCATGGGCATTCGTGCAATGGCTTGAAAGAGCTACCATCAAGGAAGACTATGTGCTCATGGCAGAGCCTGATCATGTATTTGTTAATCCCCTTCCCAATTTGGCTGTTGGAGGATTCCCAGCCGCTTTTCCGTTTTTCTATATTACTCCTGAAAAGTATGAAAACATAGTCAGAAAGTATTATCCAGCGGAGATGGGGCCAGTAACAAATATCGACCCCATTGGCAACTCTCCTGTTATCATAAGCAAGGAATCACTTGAAAAGATTGCTCCTACATGGATGAATGTCTCGCTGACAATGAAAAACGATCCAGAAACTGATAAGGCATTTGGATGGGTGCTGGAAATGTACGGTTACGCAATTGCATCTGCTATACATGGGGTGCGTCACATACTTCGGAAGGATTTCATGCTTCAGCCTCCGTGGGATTTGTCTACCAAGGGGAAGTTTATCATTCATTACACTTATGGATGCGACTACAACATGAAGGGGGAGCTGACATATGGCAAAATAGGAGAGTGGCGATTCGATAAGAGATCACATTTGCGGGGTCCTCCTCCAAGGAACATGTCCTTGCCGCCTCCCGGTGTTCCCGAAAGTGTGGTGACACTTGTGAAGATGGTGAATGAAGCTACTGCGACTATCCCTAATTGGGACACTCTCTAACTCACATCCACACACAAAACACAAACCATAGGGACAAATCCATACAGCAACAATATTTTGCCTAATTTTTTTTTCCTTCTCCCTTTACTTCCCTTCTTGTCTGTTTTTTCTTGTAATGGTTAAATTATGAACTTGAGTAGTAAATTACAAAATTATTTGTTTGACACGAGACGAGACATCTTCCATAATTCCGAGAAAGAAAATAGAATTATTTTGGGTCTAGTTATTTGATTAGTTTACCAATGGATTGCGTTCAGAATT
CDS Sequence
Protein Sequence