Information report for AT5G13280
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005829 — is active in — cytosol
- GO:0009090 — involved in — homoserine biosynthetic process
- GO:0009089 — involved in — lysine biosynthetic process via diaminopimelate
- GO:0008652 — acts upstream of or within — amino acid biosynthetic process
- GO:0009088 — involved in — threonine biosynthetic process
- GO:0004072 — enables — aspartate kinase activity
- GO:0009570 — located in — chloroplast stroma
- GO:0009507 — located in — chloroplast
Functional Keywords
Literature and News
- Lysine and threonine metabolism are subject to complex patterns of regulation in Arabidopsis. DOI: 10.1007/BF00020213 ; PMID: 8980524
- Molecular analysis of the aspartate kinase-homoserine dehydrogenase gene from Arabidopsis thaliana. DOI: 10.1007/BF00014439 ; PMID: 8204822
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Transcriptional control of aspartate kinase expression during darkness and sugar depletion in Arabidopsis: involvement of bZIP transcription factors. DOI: 10.1007/s00425-011-1360-9 ; PMID: 21279647
- Species specific amino acid sequence-protein local structure relationships: An analysis in the light of a structural alphabet. DOI: 10.1016/j.jtbi.2011.01.047 ; PMID: 21333657
- Aspartate-Derived Amino Acid Biosynthesis in Arabidopsis thaliana. DOI: 10.1199/tab.0121 ; PMID: 22303247
- and long-term perturbed lysine biosynthesis in the aspartate pathway: the need for isogenes in Arabidopsis thaliana. DOI: 10.1111/ppl.12053 ; PMID: 23556418
- Analysis of Loss-of-Function Mutants in Aspartate Kinase and Homoserine Dehydrogenase Genes Points to Complexity in the Regulation of Aspartate-Derived Amino Acid Contents. DOI: 10.1104/pp.15.00364 ; PMID: 26063505
- Root avoidance of toxic metals requires the GeBP-LIKE 4 transcription factor in Arabidopsis thaliana. DOI: 10.1111/nph.14242 ; PMID: 27768815
Gene Resources
- UniProt: A0A178UUC2
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UUC2
- EnsemblPlants: AT5G13280.1
- Gramene: AT5G13280.1
- KEGG: ath:AT5G13280
- Orthologous matrix: DNINIMM
- ExpressionAtlas: AT5G13280
- InterPro: IPR001048, IPR001341, IPR002912
- PANTHER: PTHR21499, PTHR21499:SF58
- SUPFAM: SSF53633, SSF55021
- PROSITE: PS00324, PS51671
- Gene3D: 1.20.120.1320, 3.30.70.260, 3.40.1160.10
- OrthoDB: A0A178UUC2
- SWISS-MODEL: A0A178UUC2
- Conserved Domain Database: cd04244, cd04918, cd04933
Sequences
cDNA Sequence
- >AT5G13280.1
AACAAGCCAACAACCAAAACGGGTCAAAATCAAAATCAATGGTTGGTAATAAACGACAGCGTTTTAGTACAGAGACCCGAAGAGTGGAAGGTTCAAAGTTTCCTTCTTTGGTGTCTCTCATCAAATGAGAGTGAGCCGTACGATTTCTCTCCTCTTCTTGTTTTAAAAACCTATCAATAATATTCTTCTTCTTCCTCCTCTCAAATGGCGGCTACTAGGGTTCGTTGTTGTCATAGCAATGCAGCTTTCACCAGATTGCCACTTACCCGCCACCGAAACTCGCCGACGCTACCGATTTCTCTAAATCGTGTCGATTTCCCTACGCTGAAGAAATTATCATTACCCATTGGAGATGGCTCCTCCATTAGAAAGGTTTCAGGTTCAGGCAGCAGAAACATTGTGCGAGCTGTGTTGGAAGAGAAGAAGACAGAGGCGATAACGGAGGTAGATGAGAAGGGTATCACGTGCGTGATGAAGTTTGGTGGATCTTCGGTGGCGTCAGCTGAGAGAATGAAGGAAGTTGCTGATTTGATTTTGACTTTTCCGGAAGAAAGTCCCGTCATTGTTCTCTCTGCTATGGGGAAAACTACCAACAATCTCTTGCTTGCGGGAGAGAAGGCGGTTAGTTGTGGTGTTTCTAATGCATCTGAGATTGAGGAGTTGAGCATTATAAAGGAATTGCATATCAGGACGGTGAAAGAGCTCAACATTGATCCCTCTGTTATTTTGACCTATTTGGAGGAACTGGAGCAACTCCTGAAAGGCATTGCCATGATGAAGGAATTGACACTTCGAACCAGAGATTACTTAGTCTCTTTTGGAGAGTGTTTGTCTACAAGGATTTTTGCTGCTTATCTTAATACAATCGGTGTCAAGGCACGCCAATATGATGCATTTGAAATTGGTTTCATTACAACGGATGATTTCACAAATGGGGATATCCTGGAGGCAACTTATCCAGCTGTTGCCAAGAGATTATATGATGATTGGATGCATGATCCTGCTGTTCCTATTGTAACAGGTTTCCTTGGGAAGGGTTGGAAAACTGGTGCGGTTACTACCTTGGGTAGGGGTGGCAGTGATTTGACGGCAACCACAATTGGTAAAGCGTTGGGTTTGAAAGAGATTCAGGTGTGGAAAGATGTCGATGGTGTTCTAACATGTGACCCTACTATATATAAGCGAGCTACACCAGTACCATATCTGACATTTGACGAAGCAGCCGAGCTAGCTTATTTTGGTGCACAGGTCTTGCACCCACAGTCAATGAGACCAGCAAGAGAGGGTGAGATTCCTGTTAGGGTTAAAAATTCTTATAACCCTAAGGCTCCTGGAACTATCATCACTAAAACAAGAGACATGACCAAGAGTATTCTAACGAGCATTGTTCTGAAACGTAATGTGACCATGCTGGATATAGCAAGCACCCGAATGCTTGGTCAAGTTGGCTTTCTTGCAAAGGTATTCTCGATATTTGAGGAGCTTGGCATTTCCGTAGATGTTGTTGCCACTAGTGAAGTCAGTATATCTCTGACACTGGATCCTTCAAAACTTTGGAGCAGAGAACTGATTCAACAGGAGCTTGATCATGTAGTTGAAGAACTGGAGAAAATTGCAGTTGTGAATCTTCTAAAAGGAAGAGCAATCATCTCTCTAATTGGGAATGTTCAACATTCCTCCCTGATTTTAGAGAGGGCGTTTCATGTTCTTTATACCAAAGGTGTCAATGTCCAGATGATATCACAAGGAGCATCCAAGGTAAACATTTCCTTTATAGTAAACGAAGCTGAAGCTGAAGGTTGTGTTCAGGCTCTTCACAAATCCTTCTTCGAGAGCGGTGACCTCTCAGAGTTATTGATACAACCCAGACTTGGCAACGGGTCACCTGTCAGGACACTGCAAGTAGAAAATTGACTCGACAAGCTTATTGCTTGATCTGTGTTTTTCTTTGTATTCCTTCTGAGTGTAGTATGTACGTTCATCAAGCACTGCTTGTTGTCCTACGTTTAGGAACGGGAACTGCTGGCTACCTTTCGACTGTTGTAAGACCAATTTTTTGTACCATTTGCGTGATCAAAGTTAAACCAGTTACTAGCAAGAATAAAGAAAAAAGAATATATTGATGCAACTGCAGATGTCTGGATTGGTTTTACAGAGGTTTTGATACATGTAAGTACGTTGGGCTAAAAGCTGTGCAGTTGTGTAAGCATGTGGACAAGCTCATCACTTGAAGGCCGGTCTGCCGGAAAGTCAGAAAGGCAGATGATGGTGATTCTTAAAGCCATTAACATTTCGTCTTCCTCCACTTCCTCTCCAAGAATAGTCTTATCTAATGCTTCTCGTGCTTCCCCAGACTGTTGTAAATGTTTCAGCCACTGTCCTAAGCTACCTCCGCTTGCAGACTCTTCGCAGAACGGGTGGGTCGGGTCTCTTCCGGTTAAAAGAACACCCAATATCATCCCAAAGCTGAATATGTCGCTTTTGTCTGTGTATCTGTCACAAGGATTTGCATTACCGTGTTAGT
CDS Sequence
Protein Sequence