Information report for AT5G13240
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0072718 — acts upstream of or within — response to cisplatin
- GO:0005829 — colocalizes with — cytosol
- GO:0033194 — acts upstream of or within — response to hydroperoxide
- GO:0005634 — located in — nucleus
- GO:0016480 — involved in — negative regulation of transcription by RNA polymerase III
- GO:0006950 — acts upstream of or within — response to stress
- GO:0072702 — acts upstream of or within — response to methyl methanesulfonate
- GO:0005634 — colocalizes with — nucleus
- GO:0000994 — enables — RNA polymerase III core binding
- SALK_026637C — Seedlings more susceptible (lower fresh weight) fo stress (H2O2, MMs, Cisplatin) as compared to WT.
- maf1-2 — Seedlings more susceptible (lower fresh weight) fo stress (H2O2, MMs, Cisplatin) as compared to WT. More susceptible to Torin-1 (lower total chlorophyll content) and AZD8055 (reduced root growth) as compared to WT.
Functional Keywords
Literature and News
- Gene expression profiling of the different stages of Arabidopsis thaliana trichome development on the single cell level. DOI: 10.1016/j.plaphy.2007.11.001 ; PMID: 18160300
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Characterization of Maf1 in Arabidopsis: function under stress conditions and regulation by the TOR signaling pathway. DOI: 10.1007/s00425-018-3024-5 ; PMID: 30293201
- Polymerase II-Associated Factor 1 Complex-Regulated FLOWERING LOCUS C-Clade Genes Repress Flowering in Response to Chilling. DOI: 10.3389/fpls.2022.817356 ; PMID: 35222476
- Nitrilases NIT1/2/3 Positively Regulate Flowering by Inhibiting MAF4 Expression in Arabidopsis. DOI: 10.3389/fpls.2022.889460 ; PMID: 35665187
Gene Resources
- UniProt: A0A1P8BBF6
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BBF6
- EnsemblPlants: AT5G13240.2
- Gramene: AT5G13240.2
- KEGG: ath:AT5G13240
- ExpressionAtlas: AT5G13240
- InterPro: IPR015257, IPR038564
- PANTHER: PTHR22504, PTHR22504:SF0
- Gene3D: 3.40.1000.50
- OrthoDB: A0A1P8BBF6
- SWISS-MODEL: A0A1P8BBF6
Sequences
cDNA Sequence
- >AT5G13240.2
TTTCAGACGGCCCATGTAATATCATGGAAACGGCACGCAGTTCATCATTGAGATTCAGATGCTTCGCTGTCCACAAAGCATATACGGATCTTTCGCACGTGGGAGATCTTAGCCTCGTAATAGAAAGAGAAAAACACAAGCGGAGCAATTTACGCCTTTTCCTTCCACCATCGTTTTTTCAGGTTTATCATTGTTTATCGCATCTTTCTGGAGGATCTAGCCGCTGCTATCATGAAGTTCTTGGAGTACACTAACCTAGACAGATTGAATGTTTTTCTGGGTCATCTTAATCTCGGGGAAAGGACTATCAAAGGTTGCTTGGAAGCTTATTCTTGCAAACATGCAGGAAGTGATAAAAGATTGTCTCTTAGTTTGGAGAATGAGATGCTTGATTATCTTGGGAAATCTTCTGACACCGACTCTTCTTCACCCGTTGATCTCTTGTTAAGCAGATCAAGTCGAAAGGCTTTGATCTACTTGGTTCTTACGCTCTATCAAATGTATCCGGACTACGATTTCAGCGCTGTCAAAGCACATCAGTTTTTCTCGGAGGAAAGCTGGGACACCTTTAAGCAGATTTTTAACAACTATATGTTTGAAGCTTCTAAGGAATGGACTGAGAGGAATGAGGATGGTTCCCTTCTTGAGGTGATCTACAAGGCTCTTGATGAGGTCGTAAAACTAGCTGAATGTGAGATATATGTTTACAATCCAAATCCTAATGCTGATCCTTTCCTCGAGGAAGGAGCAATATGGTCTTTCTGTTTCTTATTCTACAACCGAAAACTGAAGCGCGTTGCGGGTTTTCGTTTCTCCTGCACGAGGTTAGATGATTGTCATCCTACCAAGTTGTCTTTCTCTCTCACTGTCTTCTTCTTAAAAAGTACTTCCAACTCGAAAAATGTTTTGTTGCAGTAACCTGGCAAATGATGCATTTCTCACTGACAGTCCTCCATATGAAGAGGATGAAGAGATCTTTGCCGACATGGATATGTGATCTCTGTATCGTTATGCTGAGTCACATATTCTGTGGAAACCTGTATCTATGTGACTATGTGTGATCTCTAGTCTCTAGGCTTGTATGAGTCCGAGTCGAAGTCCAAGGTTAAGCTCTTCGCTTTCCTTTATCTGTGTAGTTGACGTGACTACTAATAATACTCTGTACTATGTCATGTGCAAATACTTATCAGGCATTGTCGTAATCTAATGTACCTAAATTCAACTGAAGAGAAAAAAAGTTGAGATTTTGTGTT - >AT5G13240.3
TTTCAGACGGCCCATGTAATATCATGGAAACGGCACGCAGTTCATCATTGAGATTCAGATGCTTCGCTGTCCACAAAGCATATACGGATCTTTCGCACGTGGGAGATCTTAGCCTCGTAATAGAAAGAGAAAAACACAAGCGGAGCAATTTACGCCTTTTCCTTCCACCATCGTTTTTTCAGGTTTATCATTGTTTATCGCATCTTTCTGGAGGATCTAGCCGCTGCTATCATGAAGTTCTTGGAGTACACTAACCTAGACAGATTGAATGTTTTTCTGGGTCATCTTAATCTCGGGGAAAGGACTATCAAAGGTTGCTTGGAAGCTTATTCTTGCAAACATGCAGGAAGTGATAAAAGATTGTCTCTTAGTTTGGAGAATGAGATGCTTGATTATCTTGGGAAATCTTCTGACACCGACTCTTCTTCACCCGTTGATCTCTTGTTAAGCAGATCAAGTCGAAAGGCTTTGATCTACTTGGTTCTTACGCTCTATCAAATGTATCCGGACTACGATTTCAGCGCTGTCAAAGCACATCAGTTTTTCTCGGAGGAAAGCTGGGACACCTTTAAGCAGATTTTTAACAACTATATGTTTGAAGCTTCTAAGGAATGGACTGAGAGGAATGAGGATGGTTCCCTTCTTGAGGTGATCTACAAGGCTCTTGATGAGGTCGTAAAACTAGCTGAATGTGAGATATATGTTTACAATCCAAATCCTAATGCTGATCCTTTCCTCGAGGAAGGAGCAATATGGTCTTTCTGTTTCTTATTCTACAACCGAAAACTGAAGCGCGTTGCGGGTTTTCGTTTCTCCTGCACGAGGTTAGATGATTGTCATCCTACCAAGTTGTCTTTCTCTCTCACTGTCTTCTTCTTAAAAAGTACTTCCAACTCGAAAAATGTTTTGTTGCAGTAACCTGGCAAATGATGCATTTCTCACTGACAGTCCTCCATATGAAGAGGATGAAGAGATCTTTGCCGACATGGATATGTGATCTCTGTATCGTTATGCTGAGTCACATATTCTGTGGAAACCTGTATCTATGTGACTATGTGTGATCTCTAGTCTCTAGGCTTGTATGAGTCCGAGTCGAAGTCCAAGGTTAAGCTCTTCGCTTTCCTTTATCTGTGTAGTTGACGTGACTACTAATAATACTCTGTACTATGTCATGTGCAAATACTTATCAGGCATTGTCGTAATCTAATGTACCTAAATTCAACTGAAGAGAAAAAAAGTTGAGATTTTGTGTT - >AT5G13240.1
TTTCAGACGGCCCATGTAATATCATGGAAACGGCACGCAGTTCATCATTGAGATTCAGATGCTTCGCTGTCCACAAAGCATATACGGATCTTTCGCACGTGGGAGATCTTAGCCTCGTAATAGAAAGAGAAAAACACAAGCGGAGCAATTTACGCCTTTTCCTTCCACCATCGTTTTTTCAGGTTTATCATTGTTTATCGCATCTTTCTGGAGGATCTAGCCGCTGCTATCATGAAGTTCTTGGAGTACACTAACCTAGACAGATTGAATGTTTTTCTGGGTCATCTTAATCTCGGGGAAAGGACTATCAAAGGTTGCTTGGAAGCTTATTCTTGCAAACATGCAGGAAGTGATAAAAGATTGTCTCTTAGTTTGGAGAATGAGATGCTTGATTATCTTGGGAAATCTTCTGACACCGACTCTTCTTCACCCGTTGATCTCTTGTTAAGCAGATCAAGTCGAAAGGCTTTGATCTACTTGGTTCTTACGCTCTATCAAATGTATCCGGACTACGATTTCAGCGCTGTCAAAGCACATCAGTTTTTCTCGGAGGAAAGCTGGGACACCTTTAAGCAGATTTTTAACAACTATATGTTTGAAGCTTCTAAGGAATGGACTGAGAGGAATGAGGATGGTTCCCTTCTTGAGGTGATCTACAAGGCTCTTGATGAGGTCGTAAAACTAGCTGAATGTGAGATATATGTTTACAATCCAAATCCTAATGCTGATCCTTTCCTCGAGGAAGGAGCAATATGGTCTTTCTGTTTCTTATTCTACAACCGAAAACTGAAGCGCGTTGCGGGTTTTCGTTTCTCCTGCACGAGGTTAGATGATTGTCATCCTACCAAGTTGTCTTTCTCTCTCACTGTCTTCTTCTTAAAAAGTACTTCCAACTCGAAAAATGTTTTGTTGCAGTAACCTGGCAAATGATGCATTTCTCACTGACAGTCCTCCATATGAAGAGGATGAAGAGATCTTTGCCGACATGGATATGTGATCTCTGTATCGTTATGCTGAGTCACATATTCTGTGGAAACCTGTATCTATGTGACTATGTGTGATCTCTAGTCTCTAGGCTTGTATGAGTCCGAGTCGAAGTCCAAGGTTAAGCTCTTCGCTTTCCTTTATCTGTGTAGTTGACGTGACTACTAATAATACTCTGTACTATGTCATGTGCAAATACTTATCAGGCATTGTCGTAATCTAATGTACCTAAATTCAACTGAAGAGAAAAAAAGTTGAGATTTTGTGTT
CDS Sequence
Protein Sequence