Gene Details:

• Gene ID: AT5G13220
• Gene Symbol: JAS1, JAZ10, PW220, TIFY9
• Gene Name: JASMONATE-ASSOCIATED 1, jasmonate-zim-domain protein 10, TIFY DOMAIN PROTEIN 9
• Description: jasmonate-zim-domain protein 10;(source:Araport11)
• TAIR Accession: locus:2183921
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G13220.1     AT5G13220.2     AT5G13220.3     AT5G13220.4     AT5G13220.5     AT5G13220.6     AT5G13220.7

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000084  — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
• PO:0000003  — whole plant — planta entera (Spanish, exact), 植物体全体 (Japanese, exact), clonal colony (related), colony (related), bush (narrow), frutex (narrow), frutices (narrow), gametophyte (narrow), herb (narrow), liana (narrow), prothalli (narrow), prothallium (narrow), prothallus (narrow), seedling (narrow), shrub (narrow), sporophyte (narrow), suffrutex (narrow), suffrutices (narrow), tree (narrow), vine (narrow), woody clump (narrow), genet (broad), ramet (broad)

Gene Ontology:

• GO:0005515  — enables — protein binding
• GO:0005634  — located in — nucleus
• GO:2000022  — acts upstream of or within — regulation of jasmonic acid mediated signaling pathway
• GO:0010112  — acts upstream of or within — regulation of systemic acquired resistance
• GO:0009753  — acts upstream of or within — response to jasmonic acid
• GO:2000022  — involved in — regulation of jasmonic acid mediated signaling pathway
• GO:0009611  — acts upstream of or within — response to wounding
• GO:0031347  — involved in — regulation of defense response
• GO:0042803  — enables — protein homodimerization activity
• GO:0009611  — involved in — response to wounding
• GO:0005634  — is active in — nucleus

Germplasm Phenotype:

• CS2107791  — leaf chlorosis in response to infection with P. syringae
• CS2107792  — strong leaf chlorosis in response to infection with P. syringae
• CS2107794  — leaf chlorosis in response to infection with P. syringae
• CS2107795  — strong leaf chlorosis in response to infection with P. syringae
• CS2107796  — strong leaf chlorosis in response to infection with P. syringae
• CS2107797  — strong leaf chlorosis in response to infection with P. syringae
• CS2107798  — strong leaf chlorosis in response to infection with P. syringae
• CS72543  — increased sensitivity to exogenous JA; constitutive short-root phenotype; constitutive growth-defense antagonism (elevated defense traits and reduced growth); delayed time to bolting
• CS72544  — robust resistance to insect herbivores and fungal pathogens, accompanied by slow vegetative growth and poor reproductive performance; seed production about one-third of WT levels and reduced germination
• CS73350  — lower rosette fresh weight and shorter roots than Col-0 WT

Function-related keywords:

• root ,  plant sperm cell ,  whole plant

Literature:

• The tify family previously known as ZIM.   DOI:  10.1016/j.tplants.2007.04.004 ;  PMID:  17499004
• The JAZ family of repressors is the missing link in jasmonate signalling.   DOI:  10.1038/nature06006 ;  PMID:  17637675
• JAZ repressor proteins are targets of the SCF(COI1) complex during jasmonate signalling.   DOI:  10.1038/nature05960 ;  PMID:  17637677
• A downstream mediator in the growth repression limb of the jasmonate pathway.   DOI:  10.1105/tpc.107.050708 ;  PMID:  17675405
• The Arabidopsis SDG4 contributes to the regulation of pollen tube growth by methylation of histone H3 lysines 4 and 36 in mature pollen.   DOI:  10.1016/j.ydbio.2007.12.016 ;  PMID:  18252252
• Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.   DOI:  10.1104/pp.108.126375 ;  PMID:  18775970
• A critical role for the TIFY motif in repression of jasmonate signaling by a stabilized splice variant of the JASMONATE ZIM-domain protein JAZ10 in Arabidopsis.   DOI:  10.1105/tpc.108.064097 ;  PMID:  19151223
• Arabidopsis auxin mutants are compromised in systemic acquired resistance and exhibit aberrant accumulation of various indolic compounds.   DOI:  10.1104/pp.109.152173 ;  PMID:  20081042
• NINJA connects the co-repressor TOPLESS to jasmonate signalling.   DOI:  10.1038/nature08854 ;  PMID:  20360743
• Analysis of secondary growth in the Arabidopsis shoot reveals a positive role of jasmonate signalling in cambium formation.   DOI:  10.1111/j.1365-313X.2010.04283.x ;  PMID:  20579310
• Alternative splicing expands the repertoire of dominant JAZ repressors of jasmonate signaling.   DOI:  10.1111/j.1365-313X.2010.04265.x ;  PMID:  20525008
• Analysis of Arabidopsis JAZ gene expression during Pseudomonas syringae pathogenesis.   DOI:  10.1111/j.1364-3703.2011.00727.x ;  PMID:  21726394
• Low red/far-red ratios reduce Arabidopsis resistance to Botrytis cinerea and jasmonate responses via a COI1-JAZ10-dependent, salicylic acid-independent mechanism.   DOI:  10.1104/pp.112.193359 ;  PMID:  22371506
• UVR8 mediates UV-B-induced Arabidopsis defense responses against Botrytis cinerea by controlling sinapate accumulation.   DOI:  10.1093/mp/sss025 ;  PMID:  22447155
• Enhancing protein stability with retained biological function in transgenic plants.   DOI:  10.1111/j.1365-313X.2012.05060.x ;  PMID:  22631228
• Negative feedback control of jasmonate signaling by an alternative splice variant of JAZ10.   DOI:  10.1104/pp.113.218164 ;  PMID:  23632853
• To grow or defend? Low red : far-red ratios reduce jasmonate sensitivity in Arabidopsis seedlings by promoting DELLA degradation and increasing JAZ10 stability.   DOI:  10.1111/nph.12971 ;  PMID:  25103816
• Linking phytochrome to plant immunity: low red : far-red ratios increase Arabidopsis susceptibility to Botrytis cinerea by reducing the biosynthesis of indolic glucosinolates and camalexin.   DOI:  10.1111/nph.13032 ;  PMID:  25236170
• Change of a conserved amino acid in the MYC2 and MYC3 transcription factors leads to release of JAZ repression and increased activity.   DOI:  10.1111/nph.13398 ;  PMID:  25817565
• Novel JAZ co-operativity and unexpected JA dynamics underpin Arabidopsis defence responses to Pseudomonas syringae infection.   DOI:  10.1111/nph.13683 ;  PMID:  26428397
• Exploring growth-defence trade-offs in Arabidopsis: phytochrome B inactivation requires JAZ10 to suppress plant immunity but not to trigger shade-avoidance responses.   DOI:  10.1111/pce.12877 ;  PMID:  27943325
• Regulation of growth-defense balance by the JASMONATE ZIM-DOMAIN (JAZ)-MYC transcriptional module.   DOI:  10.1111/nph.14638 ;  PMID:  28649719
• RAP2.6L and jasmonic acid-responsive genes are expressed upon Arabidopsis hypocotyl grafting but are not needed for cell proliferation related to healing.   DOI:  10.1007/s11103-018-0702-4 ;  PMID:  29344830
• Two Abscisic Acid-Responsive Plastid Lipase Genes Involved in Jasmonic Acid Biosynthesis in Arabidopsis thaliana.   DOI:  10.1105/tpc.18.00250 ;  PMID:  29666162
• A rationally designed JAZ subtype-selective agonist of jasmonate perception.   DOI:  10.1038/s41467-018-06135-y ;  PMID:  30194307
• JAZ repressors of metabolic defense promote growth and reproductive fitness in Arabidopsis.   DOI:  10.1073/pnas.1811828115 ;  PMID:  30348775
• Arabidopsis H(+)-ATPase AHA1 controls slow wave potential duration and wound-response jasmonate pathway activation.   DOI:  10.1073/pnas.1907379116 ;  PMID:  31527254
• AtMOB1 Genes Regulate Jasmonate Accumulation and Plant Development.   DOI:  10.1104/pp.19.01434 ;  PMID:  31862839
• Cyclophilin AtROC1(S58F) confers Arabidopsis cold tolerance by modulating jasmonic acid signaling and antioxidant metabolism.   DOI:  10.1016/j.plaphy.2020.04.012 ;  PMID:  32388423
• FITNESS Acts as a Negative Regulator of Immunity and Influences the Plant Reproductive Output After Pseudomonas syringae Infection.   DOI:  10.3389/fpls.2021.606791 ;  PMID:  33613599
• Functional specificity, diversity, and redundancy of Arabidopsis JAZ family repressors in jasmonate and COI1-regulated growth, development, and defense.   DOI:  10.1111/nph.17477 ;  PMID:  34009665
• Specialist Aphid Feeding Causes Local Activation of Salicylic and Jasmonic Acid Signaling in Arabidopsis Veins.   DOI:  10.1094/MPMI-08-21-0203-SC ;  PMID:  34669427
• Anaesthetic diethyl ether impairs long-distance electrical and jasmonate signaling in Arabidopsis thaliana.   DOI:  10.1016/j.plaphy.2021.11.019 ;  PMID:  34826706
• Identification and validation of the wound and insect bite early inducible promoter from Arabidopsis thaliana.   DOI:  10.1007/s13205-022-03143-0 ;  PMID:  35251877
• The MIK2/SCOOP Signaling System Contributes to Arabidopsis Resistance Against Herbivory by Modulating Jasmonate and Indole Glucosinolate Biosynthesis.   DOI:  10.3389/fpls.2022.852808 ;  PMID:  35401621
• MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1 mediates root sensing of serotonin through jasmonic acid signaling and modulating reactive oxygen species.   DOI:  10.1016/j.plantsci.2022.111396 ;  PMID:  35878696
• MCU proteins dominate in vivo mitochondrial Ca2+ uptake in Arabidopsis roots.   DOI:  10.1093/plcell/koac242 ;  PMID:  35938694
• (3R,7S)-12-Hydroxy-jasmonoyl-l-isoleucine is the genuine bioactive stereoisomer of a jasmonate metabolite in Arabidopsis thaliana.   DOI:  10.1111/tpj.16256 ;  PMID:  37095639
• JAZ repressor proteins are targets of the SCF(COI1) complex during jasmonate signalling.   DOI:  10.1038/nature05960 ;  PMID:  17637677
• Identification of 118 Arabidopsis transcription factor and 30 ubiquitin-ligase genes responding to chitin, a plant-defense elicitor.   DOI:  10.1094/MPMI-20-8-0900 ;  PMID:  17722694
• A downstream mediator in the growth repression limb of the jasmonate pathway.   DOI:  10.1105/tpc.107.050708 ;  PMID:  17675405
• The tify family previously known as ZIM.   DOI:  10.1016/j.tplants.2007.04.004 ;  PMID:  17499004
• A downstream mediator in the growth repression limb of the jasmonate pathway.   DOI:  10.1105/tpc.107.050708 ;  PMID:  17675405

Sequences: