Information report for AT5G13020
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005634 — is active in — nucleus
- GO:0005634 — located in — nucleus
- GO:0050832 — involved in — defense response to fungus
- GO:0006357 — acts upstream of or within — regulation of transcription by RNA polymerase II
- GO:0003682 — enables — chromatin binding
- GO:0031491 — enables — nucleosome binding
- CS69825 — Delay in early embryo development.
- CS69826 — Self-fertilization results in production of three types of defective seeds, each with an incomplete penetrance: ovule abortion (32%), seed abortion (27%) and seeds with delayed early embryo development (40%). The last category develops into mature, viable seeds. Fertilization-independent seed development is observed after emasculation.
- CS69997 — Increased resistance to CaLCuV infection.
Functional Keywords
Literature and News
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- EMSY-like genes are required for full RPP7-mediated race-specific immunity and basal defense in Arabidopsis. DOI: 10.1094/MPMI-05-11-0123 ; PMID: 21830950
Gene Resources
- UniProt: A0A1P8BGG3
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BGG3
- EnsemblPlants: AT5G13020.3
- Gramene: AT5G13020.3
- ExpressionAtlas: AT5G13020
- InterPro: IPR005491, IPR014002, IPR033485
- PANTHER: PTHR33432, PTHR33432:SF27
- SUPFAM: SSF158639, SSF63748
- PROSITE: PS51138
- Gene3D: 1.10.1240.40, 2.30.30.140
- OrthoDB: A0A1P8BGG3
- SWISS-MODEL: A0A1P8BGG3
- Conserved Domain Database: cd20404
Sequences
cDNA Sequence
- >AT5G13020.3
CTTTTTTGAGATTAATTATTACACAGAAAATATGATGTTAAAAACAAAAAAAAAACAAAAACAGAAGTGTTGGTATGAAAGTGTACCGAAGTTCGGGTTTAAGACAGAACCAAAAGAGATAGAAAGATGAGAGTGAAACGACAAAACTTGCCGTCGTTCGTGTAACTCAAACCAACCTATCAACTGAGAAAAAATTAGGGCACAAAATAATGTGGGTTTCACGTCCGCGACTCATAGATCCCTCGGAAAATTCATCACGATTTGTTCTGTAATTCTTCAATTCCACGGCGTTCTTTCTGCTTCCTGGAGATCTAACGTTGGTGAATTCGGATTGGAGCCGAGAGATTGCCTATAAGAATCGTCCTTTGTTCGGATCTTCTAATTTATAGATTTGTGTTGTCTGCTTTCTCGCTCAAATCTATATGATCTTTAGGGAGTAATTTTCTCGATGGCTGTTCGAATTTTTCGAGAATAGATCCAAAGAAGCTCGTGCTTTGGTGCAACTAGACAGGCCACATCCCACGTTTTGATTTCTTAGGTTCACTGTAAAGAATAATCAGGAGAGTACACAGATGGATTACCGACCTTCTGATAGTAGTGGTACAGATGATGACCTGCCTCCATCTCATCAAGGTAGATATCAAAGAAACGCCAGACCTACCGGGAATGGAAGGCCTTCAGTTCTCAATTCTGCTCCTTTATCACGGGTGCACAATGAAATGGAAACTCAAATTCATCTCATTGAGCAAGAAGCTTATAGCTCGATACTCCGCGCATTTAAAGCCCAGTCCGATGCTATTACCTGGGAGAAAGAAAGTTTGATCACTGAACTCAGAAAAGAACTTCGAGTGTCTGATGAGGAACACAGAGAGCTGTTATCAAGGGTTAACGCTGATGAAATGATCAGGCGAATAAGGGAATGGAGAAAGGCAAACAGCCTTCAGTCTAGTGTTCCTCAGCTGGTTCATGATGCTCCGAGTCCGGCTGTATCAGGATCACGTAAGAAGCAAAAGACATCACAATCAATCGCCTCATTAGCGATGGGCCCACCATCTCCTTCTTTGCACCCTTCAATGCAACCATCGTCATCTGCACTAAGAAGGGGAGGTCCTCCACCAGGTCCAAAGACCAAGAAGCCAAAGACATCGATGCAGTACCCATCTACAGGCATTGCTGGAAGGCCCCAGGCTGGCGCTTTAACAAATGAACCAGGTGAATCGGGATCATATGACCCGTTGGTTGGAAGGAAGGTATGGACGAAGTGGCCTGATGACAACCAATACTACGAAGCTGTTATAACTGACTACAACCCTGTTGAGGGGCGTCATGCTTTAGTGTATGATATTAACTCTGCGAATGAAACCTGGGAATGGGTAAATCTTAAAGAGGTAATTATGATTTCAGTTTTTCTACTTGTCTAATATATCTTTCACATTTGTACAGAAGATGATGCTATGTCGTAAAATTTGGAGAGACCATGTGTTGTTTGTCTTCTTCTATTTGGTTATGATCTCGATGGTTTATATTCGACATTCCTTGCACGTCAATGAGAGGCTTGTCAGTTTTTATACCAACTGCAATTCATTTCGATTCTGCACACTAGAAGTGAGAGATTAGTTTTACTTGTTCGCTGCCACCCAAGTTGGATCATGAATGATGTTAAAAACAATTGTTAGTTGCCCTCACCCATCCATTAGTTTCTCATCTAATGGTTCAGTTTCTTGATTGCCATCTGTAAGGGGCAGAGGACAAAAGTGTATGATTAGTGCTCGATCCTCTACATTATATATAATTCTGAATGTTCTTTATATATATATATAT - >AT5G13020.1
CTTTTTTGAGATTAATTATTACACAGAAAATATGATGTTAAAAACAAAAAAAAAACAAAAACAGAAGTGTTGGTATGAAAGTGTACCGAAGTTCGGGTTTAAGACAGAACCAAAAGAGATAGAAAGATGAGAGTGAAACGACAAAACTTGCCGTCGTTCGTGTAACTCAAACCAACCTATCAACTGAGAAAAAATTAGGGCACAAAATAATGTGGGTTTCACGTCCGCGACTCATAGATCCCTCGGAAAATTCATCACGATTTGTTCTGTAATTCTTCAATTCCACGGCGTTCTTTCTGCTTCCTGGAGATCTAACGTTGGTGAATTCGGATTGGAGCCGAGAGATTGCCTATAAGAATCGTCCTTTGTTCGGATCTTCTAATTTATAGATTTGTGTTGTCTGCTTTCTCGCTCAAATCTATATGATCTTTAGGGAGTAATTTTCTCGATGGCTGTTCGAATTTTTCGAGAATAGATCCAAAGAAGCTCGTGCTTTGGTGCAACTAGACAGGCCACATCCCACGTTTTGATTTCTTAGGTTCACTGTAAAGAATAATCAGGAGAGTACACAGATGGATTACCGACCTTCTGATAGTAGTGGTACAGATGATGACCTGCCTCCATCTCATCAAGGTAGATATCAAAGAAACGCCAGACCTACCGGGAATGGAAGGCCTTCAGTTCTCAATTCTGCTCCTTTATCACGGGTGCACAATGAAATGGAAACTCAAATTCATCTCATTGAGCAAGAAGCTTATAGCTCGATACTCCGCGCATTTAAAGCCCAGTCCGATGCTATTACCTGGGAGAAAGAAAGTTTGATCACTGAACTCAGAAAAGAACTTCGAGTGTCTGATGAGGAACACAGAGAGCTGTTATCAAGGGTTAACGCTGATGAAATGATCAGGCGAATAAGGGAATGGAGAAAGGCAAACAGCCTTCAGTCTAGTGTTCCTCAGCTGGTTCATGATGCTCCGAGTCCGGCTGTATCAGGATCACGTAAGAAGCAAAAGACATCACAATCAATCGCCTCATTAGCGATGGGCCCACCATCTCCTTCTTTGCACCCTTCAATGCAACCATCGTCATCTGCACTAAGAAGGGGAGGTCCTCCACCAGGTCCAAAGACCAAGAAGCCAAAGACATCGATGCAGTACCCATCTACAGGCATTGCTGGAAGGCCCCAGGCTGGCGCTTTAACAAATGAACCAGGTGAATCGGGATCATATGACCCGTTGGTTGGAAGGAAGGTATGGACGAAGTGGCCTGATGACAACCAATACTACGAAGCTGTTATAACTGACTACAACCCTGTTGAGGGGCGTCATGCTTTAGTGTATGATATTAACTCTGCGAATGAAACCTGGGAATGGGTAAATCTTAAAGAGGTAATTATGATTTCAGTTTTTCTACTTGTCTAATATATCTTTCACATTTGTACAGAAGATGATGCTATGTCGTAAAATTTGGAGAGACCATGTGTTGTTTGTCTTCTTCTATTTGGTTATGATCTCGATGGTTTATATTCGACATTCCTTGCACGTCAATGAGAGGCTTGTCAGTTTTTATACCAACTGCAATTCATTTCGATTCTGCACACTAGAAGTGAGAGATTAGTTTTACTTGTTCGCTGCCACCCAAGTTGGATCATGAATGATGTTAAAAACAATTGTTAGTTGCCCTCACCCATCCATTAGTTTCTCATCTAATGGTTCAGTTTCTTGATTGCCATCTGTAAGGGGCAGAGGACAAAAGTGTATGATTAGTGCTCGATCCTCTACATTATATATAATTCTGAATGTTCTTTATATATATATATAT - >AT5G13020.2
CTTTTTTGAGATTAATTATTACACAGAAAATATGATGTTAAAAACAAAAAAAAAACAAAAACAGAAGTGTTGGTATGAAAGTGTACCGAAGTTCGGGTTTAAGACAGAACCAAAAGAGATAGAAAGATGAGAGTGAAACGACAAAACTTGCCGTCGTTCGTGTAACTCAAACCAACCTATCAACTGAGAAAAAATTAGGGCACAAAATAATGTGGGTTTCACGTCCGCGACTCATAGATCCCTCGGAAAATTCATCACGATTTGTTCTGTAATTCTTCAATTCCACGGCGTTCTTTCTGCTTCCTGGAGATCTAACGTTGGTGAATTCGGATTGGAGCCGAGAGATTGCCTATAAGAATCGTCCTTTGTTCGGATCTTCTAATTTATAGATTTGTGTTGTCTGCTTTCTCGCTCAAATCTATATGATCTTTAGGGAGTAATTTTCTCGATGGCTGTTCGAATTTTTCGAGAATAGATCCAAAGAAGCTCGTGCTTTGGTGCAACTAGACAGGCCACATCCCACGTTTTGATTTCTTAGGTTCACTGTAAAGAATAATCAGGAGAGTACACAGATGGATTACCGACCTTCTGATAGTAGTGGTACAGATGATGACCTGCCTCCATCTCATCAAGGTAGATATCAAAGAAACGCCAGACCTACCGGGAATGGAAGGCCTTCAGTTCTCAATTCTGCTCCTTTATCACGGGTGCACAATGAAATGGAAACTCAAATTCATCTCATTGAGCAAGAAGCTTATAGCTCGATACTCCGCGCATTTAAAGCCCAGTCCGATGCTATTACCTGGGAGAAAGAAAGTTTGATCACTGAACTCAGAAAAGAACTTCGAGTGTCTGATGAGGAACACAGAGAGCTGTTATCAAGGGTTAACGCTGATGAAATGATCAGGCGAATAAGGGAATGGAGAAAGGCAAACAGCCTTCAGTCTAGTGTTCCTCAGCTGGTTCATGATGCTCCGAGTCCGGCTGTATCAGGATCACGTAAGAAGCAAAAGACATCACAATCAATCGCCTCATTAGCGATGGGCCCACCATCTCCTTCTTTGCACCCTTCAATGCAACCATCGTCATCTGCACTAAGAAGGGGAGGTCCTCCACCAGGTCCAAAGACCAAGAAGCCAAAGACATCGATGCAGTACCCATCTACAGGCATTGCTGGAAGGCCCCAGGCTGGCGCTTTAACAAATGAACCAGGTGAATCGGGATCATATGACCCGTTGGTTGGAAGGAAGGTATGGACGAAGTGGCCTGATGACAACCAATACTACGAAGCTGTTATAACTGACTACAACCCTGTTGAGGGGCGTCATGCTTTAGTGTATGATATTAACTCTGCGAATGAAACCTGGGAATGGGTAAATCTTAAAGAGGTAATTATGATTTCAGTTTTTCTACTTGTCTAATATATCTTTCACATTTGTACAGAAGATGATGCTATGTCGTAAAATTTGGAGAGACCATGTGTTGTTTGTCTTCTTCTATTTGGTTATGATCTCGATGGTTTATATTCGACATTCCTTGCACGTCAATGAGAGGCTTGTCAGTTTTTATACCAACTGCAATTCATTTCGATTCTGCACACTAGAAGTGAGAGATTAGTTTTACTTGTTCGCTGCCACCCAAGTTGGATCATGAATGATGTTAAAAACAATTGTTAGTTGCCCTCACCCATCCATTAGTTTCTCATCTAATGGTTCAGTTTCTTGATTGCCATCTGTAAGGGGCAGAGGACAAAAGTGTATGATTAGTGCTCGATCCTCTACATTATATATAATTCTGAATGTTCTTTATATATATATATAT
CDS Sequence
Protein Sequence