Information report for AT5G13010
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0009793 — acts upstream of or within — embryo development ending in seed dormancy
- GO:0008380 — acts upstream of or within — RNA splicing
- GO:0005634 — located in — nucleus
- GO:0035194 — involved in — regulatory ncRNA-mediated post-transcriptional gene silencing
- GO:0031053 — acts upstream of or within — primary miRNA processing
- GO:0033120 — involved in — positive regulation of RNA splicing
- GO:0000398 — involved in — mRNA splicing, via spliceosome
- GO:0048767 — acts upstream of or within — root hair elongation
- GO:0005622 — is active in — intracellular anatomical structure
- GO:0048364 — involved in — root development
- GO:0003724 — enables — RNA helicase activity
- GO:0010467 — involved in — gene expression
- GO:0031334 — acts upstream of or within — positive regulation of protein-containing complex assembly
- GO:0005681 — part of — spliceosomal complex
- GO:0004386 — enables — helicase activity
- GO:0010051 — acts upstream of or within — xylem and phloem pattern formation
- GO:0003723 — enables — RNA binding
- CS24359 — embryo defective; developmental arrest of mutant embryos occurs at globular stage.
Functional Keywords
Literature and News
- Genome-wide analysis of alternative pre-mRNA splicing in Arabidopsis thaliana based on full-length cDNA sequences. DOI: 10.1093/nar/gkh845 ; PMID: 15452276
- Defective RNA processing enhances RNA silencing and influences flowering of Arabidopsis. DOI: 10.1073/pnas.0606536103 ; PMID: 17008405
- Genetic subtraction profiling identifies genes essential for Arabidopsis reproduction and reveals interaction between the female gametophyte and the maternal sporophyte. DOI: 10.1186/gb-2007-8-10-r204 ; PMID: 17915010
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Molecular foundations of reproductive lethality in Arabidopsis thaliana. DOI: 10.1371/journal.pone.0028398 ; PMID: 22164284
- Phytophthora effector targets a novel component of small RNA pathway in plants to promote infection. DOI: 10.1073/pnas.1421475112 ; PMID: 25902521
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
Gene Resources
Sequences
cDNA Sequence
- >AT5G13010.1
CACGCACATACTGAATCGCGTTAAAGCGTGTGTAACCTAACCGGCGGTGATCCTTTGTTCCGATCGTGTTGCTAACTTTCTCAGCTTCCAGATATCTCTCTCTCTGAGGAGATATCAAAGGTTGATCCAAAGAAGGTGTTTCACGTTGTTGAAATTGGATAATTCAGAAAAAAGCACCTGGAATCAATCACTCAAGAGGAGTTGAAGGAACCAAAGCCCTAATAAACTAGGGAAAGTAATCTATCCTCGCCGGAGTCGTTGTCTCGCCGATAAGGAACGAAGGACGAAGCTGTCTTCGATTTCCGGGATTGAAGATTCGGTTTTGAGCTCAAATCGTCGACTGAGTAATGGGGGTTGATCCATTCAAAACTACGGAAACGTTAGAAGCCGACAAGGAAACCAATGGTGGTGTCCCTGTGAAGGATAAATTGACTTTTAAAGCTCCTGAGAGAAAGTCCCGTTTAGGTTTGGATGCAAGGGCAATTGAGAAAAAGGATAATGCCAAGACTGAGGGCGAGTTTAAGGTTCCGAAGAAGTCAGCAATATCTGTTACATCATCGTTGGATGAAGAAGATAAATCTGATGTATCAGGATTAGATTTTGGAACAGAAAACACTCGACCTGTCCATTCCAGCAGGCGATATAGAGAGAAGTCTTCAAGATCTCAGTCTGCACAAGAAAGTACCGTGACTACAGAGAATGCTGGAACTTCAGATATCTCCATAACTCCAAGGACTTTATCTTGCACATCTAGTTATGAAAGAGGTGGTAGCAATAGGCATCGAGAAGAACATAGGCGTGACAGAAGTGAAACTCCGCGGTCAAGACAGAGAAACACTTATGATGAGATGGATCACTACCGACGGAGGGAATCTTATCGCCAATCTGACCGAGACTATCACGGAGAAAAGCGTAGGAGATACAATAGCGATTGGAGGACTCCAGGTAGGTCAGACTGGGATGATGGACAGGACGAATGGGAACGTAGTCCTCACGGAGACAGAGGCTCTAGTTACAGCAGGCGACCTCAACCTTCTCCATCACCCATGTTAGCTGCAGCTTCACCTGATGCTCGTTTAGCCTCCCCGTGGCTGGATACACCACGTTCAACTATGTCTTCTGCTTCTCCATGGGATATGGGTGCACCTTCTCCTATTCCAATTCGGGCTTCTGGATCATCTATCAGATCCTCAAGCTCTAGGTATGGTGGAAGATCCAATCAGCTTGCATATTCTAGGGAAGGTGATCTGACAAATGAGGGGCATTCAGATGAGGATAGATCGCAAGGAGCTGAAGAATTTAAACATGAGATCACAGAAACAATGCGTGTGGAAATGGAATATCAGTCAGATCGTGCATGGTATGATACAGACGAAGGGAACTCACTGTTTGATGCGGACAGTGCATCCTTTTTTCTTGGAGATGATGCTTCTCTACAGAAGAAGGAAACTGAACTGGCAAAGAGACTGGTTAGAAGAGACGGTAGCAAAATGTCACTCGCTCAGAGTAAAAAATATTCTCAGCTCAATGCGGATAATGCTCAATGGGAAGACCGCCAGCTTCTCAGATCTGGAGCTGTTAGAGGCACAGAAGTGCAGACTGAGTTTGATAGCGAAGAAGAACGGAAAGCAATTCTTCTTGTACATGATACGAAGCCTCCTTTCCTTGATGGAAGAGTCGTTTACACAAAGCAAGCAGAGCCAGTAATGCCTGTAAAGGATCCCACATCAGACATGGCTATAATTTCACGAAAAGGCTCAGGTCTTGTCAAAGAAATTCGGGAGAAACAAAGTGCGAATAAGTCACGACAGCGATTCTGGGAGCTTGCAGGTTCTAATCTTGGTAATATCCTTGGTATTGAAAAATCAGCCGAGCAGATTGATGCCGATACTGCTGTAGTTGGTGACGACGGTGAAGTAGATTTTAAAGGTGAGGCTAAATTTGCACAACATATGAAGAAGGGAGAAGCTGTGAGTGAATTTGCCATGTCAAAGACCATGGCAGAGCAACGGCAGTATCTTCCCATATTTTCTGTTAGAGATGAACTATTGCAGGTAATAAGAGAAAACCAGGTGATAGTGGTGGTTGGCGAAACTGGTTCGGGAAAGACCACTCAACTTACACAGTATCTTCATGAGGATGGTTACACTATAAATGGTATAGTTGGTTGCACCCAACCAAGGCGTGTAGCAGCCATGAGTGTTGCAAAGAGAGTTAGTGAAGAGATGGAAACAGAGTTGGGCGATAAAATTGGTTATGCAATTCGTTTTGAAGATGTAACTGGTCCAAACACTGTTATCAAGTACATGACCGATGGAGTACTACTGAGAGAGACCCTCAAAGATTCTGACCTGGATAAGTATCGTGTGGTGGTGATGGATGAAGCGCATGAAAGGTCACTCAACACAGACGTCCTTTTTGGAATACTGAAAAAAGTTGTGGCTCGGCGTCGTGATTTCAAGCTGATAGTCACGTCAGCAACCCTTAATGCTCAAAAGTTTTCCAATTTCTTTGGGAGTGTTCCTATCTTCAACATTCCTGGAAGGACTTTCCCTGTCAATATTCTCTACTCTAAAACTCCTTGTGAAGACTATGTTGAAGCTGCTGTTAAACAGGCAATGACGATTCACATAACAAGCCCACCTGGGGACATTCTCATTTTTATGACCGGGCAAGATGAGATTGAGGCAGCGTGCTTTTCACTAAAGGAGAGAATGGAACAGCTCGTATCATCTTCCAGTAGAGAAATAACGAACCTACTCATTCTCCCAATATACTCTCAGTTACCTGCTGACTTGCAAGCAAAGATATTCCAGAAACCAGAAGATGGAGCCCGTAAATGCATTGTTGCCACCAATATTGCTGAAACATCATTGACAGTCGATGGAATATATTATGTGATTGACACTGGGTATGGAAAGATGAAGGTTTTCAATCCTAGAATGGGTATGGATGCTCTTCAAGTTTTCCCCATAAGTCGTGCAGCCTCTGATCAGCGTGCTGGAAGAGCTGGAAGGACAGGGCCAGGAACATGTTACAGGTTGTATACTGAGAGTGCTTATTTGAATGAGATGTTGCCAAGTCCTGTGCCAGAGATTCAGCGGACGAATCTGGGTAATGTTGTGTTGTTGTTGAAGTCATTGAAAATAGACAACTTGCTAGATTTTGATTTCATGGATCCACCTCCGCAAGAGAACATCCTTAACTCTATGTACCAGCTTTGGGTGTTGGGTGCTCTCAACAATGTTGGAGGATTAACCGACCTGGGGTGGAAGATGGTGGAGTTCCCATTGGATCCTCCTCTTGCAAAGATGCTTTTAATGGGTGAACGGCTTGATTGCATAGATGAGGTTCTGACGATCGTGTCAATGCTTTCAGTACCTTCAGTGTTCTTCAGACCTAAAGAAAGAGCAGAAGAGAGCGACGCTGCAAGGGAGAAGTTTTTTGTGCCGGAATCGGATCATCTGACGCTGCTGAACGTATATCAGCAGTGGAAAGAGCATGACTATAGAGGAGACTGGTGCAATGACCATTACCTACAAGTGAAAGGTTTGAGAAAAGCTAGAGAGGTAAGATCCCAGCTTCTGGATATCCTCAAGCAACTGAAAATTGAACTCAGGTCGTGTGGACCGGATTGGGATATTGTGAGAAAAGCCATCTGTTCAGCGTATTTCCACAACTCAGCTAGATTAAAAGGTGTTGGGGAGTATGTGAACTGCAGAACCGGGATGCCTTGCCATTTGCACCCTAGCAGTGCACTGTACGGTCTGGGATACACACCGGACTATGTGGTGTACCATGAACTGATCTTGACCACAAAGGAGTACATGCAGTGTGCGACATCGGTTGAGCCGCATTGGCTGGCTGAGTTAGGGCCTATGTTCTTCTCGGTCAAGGACTCGGATACATCGATGTTGGAGCATAAAAAAAAGCAGAAGGAAGAGAAATCAGGAATGGAGGAAGAGATGGAGAAACTGAGAAGAGATCAGGTGGAGTCAGAGCTGAGAAGCAAAGAGAGAGAGAGAAAAAAAAGGGCAAAGCAGCAGCAACAGATTTCAGGCCCTGGCTTGAAAAAGGGCACCACTTTCCTCAGGCCTAAGAAGCTTGGACTGTGACATTGTAATGTAATAAAAAACATACCGAAAACGTCACCCAAACAAAAAAAACGGAAAAAACACAGCCAAAATGGAGCAAACTGTAATCACCATGTATCGTTGTTCAGATATTTCTTGATGTGAACAATATTAAATTGTTCCACGCTTGTATTGATTCTTTATAACTAATTAGTTAGAGATCCTCTACGTCTCTAGTATAGTAAAGTTACGGTCCAATTTGTGTTCTCTACAACTCTATAATAAGCAAATTACTAATCAACAGAAATAGTCACAATCCAAAATGGTGTGTTTCCACCATTGATGATTTCAGCTGTTTCTCTTCATAGAGCATCTAGATTCTCAGAA
CDS Sequence
Protein Sequence