Gene Details:

• Gene ID: AT5G12870
• Gene Symbol: ATMYB46, MYB46
• Gene Name: MYB DOMAIN PROTEIN 46, myb domain protein 46
• Description: myb domain protein 46;(source:Araport11)
• TAIR Accession:
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G12870.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0000272  — protoxylem — portion of protoxylem tissue (exact), protoxilema (Spanish, exact), 原生木（質）部 (Japanese, exact)
• PO:0000372  — metaxylem — metaxilema (Spanish, exact), portion of metaxylem tissue (exact), 後生木部 (Japanese, exact)
• PO:0003015  — primary root differentiation zone — zona de diferenciación de la raíz primary (Spanish, exact), 一次根分化帯（層） (Japanese, exact)
• PO:0025257  — primary root elongation zone — zona de elongación de la raíz primaria (Spanish, exact), 一次根伸長帯（層） (Japanese, exact)

Function-related keywords:

• root ,  protoxylem ,  metaxylem ,  primary root differentiation zone ,  primary root elongation zone

Literature:

• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The R2R3-MYB gene family in Arabidopsis thaliana.   DOI:  10.1016/s1369-5266(00)00199-0 ;  PMID:  11597504
• The xylem and phloem transcriptomes from secondary tissues of the Arabidopsis root-hypocotyl.   DOI:  10.1104/pp.105.060202 ;  PMID:  15923329
• The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family.   DOI:  10.1007/s11103-005-2910-y ;  PMID:  16463103
• Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots.   DOI:  10.1073/pnas.0510607103 ;  PMID:  16581911
• Quantification of transcription factor expression from Arabidopsis images.   DOI:  10.1093/bioinformatics/btl228 ;  PMID:  16873489
• A battery of transcription factors involved in the regulation of secondary cell wall biosynthesis in Arabidopsis.   DOI:  10.1105/tpc.108.061325 ;  PMID:  18952777
• MYB58 and MYB63 are transcriptional activators of the lignin biosynthetic pathway during secondary cell wall formation in Arabidopsis.   DOI:  10.1105/tpc.108.063321 ;  PMID:  19122102
• Gibberellin acts through jasmonate to control the expression of MYB21, MYB24, and MYB57 to promote stamen filament growth in Arabidopsis.   DOI:  10.1371/journal.pgen.1000440 ;  PMID:  19325888
• Ectopic expression of MYB46 identifies transcriptional regulatory genes involved in secondary wall biosynthesis in Arabidopsis.   DOI:  10.1111/j.1365-313X.2009.03989.x ;  PMID:  19674407
• Transcriptional regulation of lignin biosynthesis.   DOI:  10.4161/psb.4.11.9875 ;  PMID:  19838072
• MYB83 is a direct target of SND1 and acts redundantly with MYB46 in the regulation of secondary cell wall biosynthesis in Arabidopsis.   DOI:  10.1093/pcp/pcp139 ;  PMID:  19808805
• Transcriptional activation of secondary wall biosynthesis by rice and maize NAC and MYB transcription factors.   DOI:  10.1093/pcp/pcr123 ;  PMID:  21908441
• MYB46 and MYB83 bind to the SMRE sites and directly activate a suite of transcription factors and secondary wall biosynthetic genes.   DOI:  10.1093/pcp/pcr185 ;  PMID:  22197883
• The heterologous expression in Arabidopsis thaliana of sorghum transcription factor SbbHLH1 downregulates lignin synthesis.   DOI:  10.1093/jxb/ert150 ;  PMID:  23698629
• Transcription factors that directly regulate the expression of CSLA9 encoding mannan synthase in Arabidopsis thaliana.   DOI:  10.1007/s11103-013-0154-9 ;  PMID:  24243147
• Pinoresinol reductase 1 impacts lignin distribution during secondary cell wall biosynthesis in Arabidopsis.   DOI:  10.1016/j.phytochem.2014.07.008 ;  PMID:  25107662
• Promoter-based integration in plant defense regulation.   DOI:  10.1104/pp.114.248716 ;  PMID:  25352272
• Reconstitution of a secondary cell wall in a secondary cell wall-deficient Arabidopsis mutant.   DOI:  10.1093/pcp/pcu208 ;  PMID:  25535195
• An Arabidopsis gene regulatory network for secondary cell wall synthesis.   DOI:  10.1038/nature14099 ;  PMID:  25533953
• Improving total saccharification yield of Arabidopsis plants by vessel-specific complementation of caffeoyl shikimate esterase (cse) mutants.   DOI:  10.1186/s13068-016-0551-9 ;  PMID:  27390589
• Expression analysis of transporter genes for screening candidate monolignol transporters using Arabidopsis thaliana cell suspensions during tracheary element differentiation.   DOI:  10.1007/s10265-017-0979-4 ;  PMID:  28921082
• The Receptor-Like Kinase AtVRLK1 Regulates Secondary Cell Wall Thickening.   DOI:  10.1104/pp.17.01279 ;  PMID:  29678858
• Dual role of SND1 facilitates efficient communication between abiotic stress signalling and normal growth in Arabidopsis.   DOI:  10.1038/s41598-018-28413-x ;  PMID:  29973639
• Transcriptional regulation of nitrogen-associated metabolism and growth.   DOI:  10.1038/s41586-018-0656-3 ;  PMID:  30356219
• Arabidopsis C-terminal binding protein ANGUSTIFOLIA modulates transcriptional co-regulation of MYB46 and WRKY33.   DOI:  10.1111/nph.16826 ;  PMID:  32706429
• Mitogen-activated protein kinase 6 negatively regulates secondary wall biosynthesis by modulating MYB46 protein stability in Arabidopsis thaliana.   DOI:  10.1371/journal.pgen.1009510 ;  PMID:  33826618
• Understanding the Modus Operandi of Class II KNOX Transcription Factors in Secondary Cell Wall Biosynthesis.   DOI:  10.3390/plants11040493 ;  PMID:  35214825
• Arabidopsis GELP7 functions as a plasma membrane-localized acetyl xylan esterase, and its overexpression improves saccharification efficiency.   DOI:  10.1007/s11103-022-01275-8 ;  PMID:  35577991
• Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes.   DOI:  10.1126/science.290.5499.2105 ;  PMID:  11118137
• The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family.   DOI:  10.1007/s11103-005-2910-y ;  PMID:  16463103
• Transcriptional and posttranscriptional regulation of transcription factor expression in Arabidopsis roots.   DOI:  10.1073/pnas.0510607103 ;  PMID:  16581911
• The MYB46 transcription factor is a direct target of SND1 and regulates secondary wall biosynthesis in Arabidopsis.   DOI:  10.1105/tpc.107.053678 ;  PMID:  17890373

Sequences: