Information report for AT5G12850
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- High-throughput protein localization in Arabidopsis using Agrobacterium-mediated transient expression of GFP-ORF fusions. DOI: 10.1111/j.1365-313X.2004.02281.x ; PMID: 15610358
- Calmodulin interacts with and regulates the RNA-binding activity of an Arabidopsis polyadenylation factor subunit. DOI: 10.1104/pp.105.070672 ; PMID: 16500995
- Comparison of gene expression in segregating families identifies genes and genomic regions involved in a novel adaptation, zinc hyperaccumulation. DOI: 10.1111/j.1365-294X.2006.02981.x ; PMID: 16911220
- The CCCH-type zinc finger proteins AtSZF1 and AtSZF2 regulate salt stress responses in Arabidopsis. DOI: 10.1093/pcp/pcm088 ; PMID: 17609218
- Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice. DOI: 10.1186/1471-2164-9-44 ; PMID: 18221561
- PRR5, 7 and 9 positively modulate TOR signaling-mediated root cell proliferation by repressing TANDEM ZINC FINGER 1 in Arabidopsis. DOI: 10.1093/nar/gkz191 ; PMID: 30892623
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A5S9Y4E9
- EMBL: CACSHJ010000096, LR881470
- AlphaFoldDB: A0A5S9Y4E9
- EnsemblPlants: AT5G12850.1
- Gramene: AT5G12850.1
- KEGG: ath:AT5G12850
- Orthologous matrix: FAHANEE
- ExpressionAtlas: AT5G12850
- InterPro: IPR000571, IPR002110, IPR036770
- PANTHER: PTHR14493, PTHR14493:SF151
- SUPFAM: SSF48403
- PROSITE: PS50088, PS50103, PS50297
- Gene3D: 1.25.40.20, 3.30.1370.210
- OrthoDB: A0A5S9Y4E9
- SWISS-MODEL: A0A5S9Y4E9
Sequences
cDNA Sequence
- >AT5G12850.1
TAAATATACCCTCACGCGCCCGCCACCTTCTACCGCTTTATCCCGTCACATACGCTGCAGAGCTCTTTAACCTCTTTACACTATCTCTCACCACTTCTTCCGGTCACACCAGTTACCCTCTCATCCGTTTTCGTTTTTTTTTTCTCTCTTTCAAAAATCTCTCAGCTGAGGTTGATCGATCTTCTTCTTCTTCTTCCTCACTCTTTAGATTTGTTCCTTTTGCATTTTACACTTTTGGATCTGAAAATGTGGTTCTCTGTTTCGCCCGTTACCGTTTAGATTCAGTTCTGTTTTTTTCTTACCCGATCGCTTGATTCGGACTGTGATCTTTGATCTTTTTTCTTCTCCAGTGCCGTGAAGGATGTGTGGTCTTGCTAAGAAGCTGGATATAGAGGATACTTTGACATCACTGTCAGACCAAGAGAATGAATCTTTGGCCAAACCCATGAATGATGCTGCTGAATGGGAACATTCGTTTTCTGCCTTGCTTGAGTTTGCTGCAGACAACGATGTGGAGGGGTTTAGGCGGCAACTCTCTGATGTGTCTTGTATCAACCAGATGGGTCTTTGGTACAGACGGCAGAGGTTTGTTAGAAGAATGGTTCTTGAGCAAAGAACCCCGCTGATGGTTGCTTCGTTATATGGGAGTTTAGATGTTGTGAAGTTTATTCTTTCTTTCCCGGAAGCGGAGTTGAATCTGTCTTGTGGTCCTGATAAAAGTACTGCTCTTCATTGCGCTGCTTCTGGTGCTTCTGTGAATTCCTTGGATGTTGTCAAGTTGCTTTTGAGTGTAGGAGCAGATCCTAATATCCCTGATGCTCATGGAAATCGTCCTGTTGATGTTCTTGTTGTGTCTCCACACGCTCCTGGTTTGAGAACCATCCTTGAAGAGATCTTGAAGAAAGACGAGATTATATCTGAAGATCTGCATGCCTCGTCATCTAGCTTGGGATCAAGTTTCCGGTCTCTCTCATCATCCCCTGATAATGGTTCCTCGTTACTCTCCTTAGATTCAGTATCCTCTCCGACTAAGCCACACGGTACTGATGTAACTTTCGCATCAGAGAAGAAAGAGTACCCAATTGATCCATCATTGCCTGATATCAAAAGCGGGATTTATTCAACCGATGAGTTTCGTATGTTCTCGTTCAAGATCCGCCCATGTTCTCGAGCATATTCCCATGACTGGACTGAATGTCCATTTGCACACCCAGGTGAGAATGCAAGGAGAAGAGACCCGAGGAAGTTTCACTATACGTGTGTTCCATGCCCGGATTTTAAGAAAGGATCCTGTAAGCAAGGTGATATGTGTGAATATGCTCATGGGGTTTTTGAATGCTGGCTACACCCTGCTCAGTACAGAACACGATTGTGCAAGGACGGAATGGGTTGCAACCGAAGGGTTTGCTTCTTTGCTCACGCAAATGAGGAGTTGCGTCCCTTGTACCCTTCCACAGGATCTGGATTGCCATCTCCTCGGGCTTCGTCTGCTGTTTCCGCCTCTACTATGGACATGGCGTCAGTTTTGAACATGTTACCAGGCTCACCATCTGCTGCTCAACATTCGTTCACCCCACCAATATCTCCTTCTGGAAATGGTAGTATGCCCCATTCATCGATGGGTTGGCCTCAGCAGAACATACCGGCGTTGAATCTTCCTGGAAGCAATATCCAGTTGAGTCGTCTGAGATCTTCTCTTAACGCTAGAGATATTCCTTCTGAGCAGCTTAGCATGCTGCATGAGTTTGAAATGCAACGTCAGCTTGCTGGCGATATGCACAGTCCACGCTTTATGAATCATTCCGCTCGTCCTAAGACACTGAACCCTTCAAATCTGGAGGAACTCTTCTCAGCTGAGGTTGCATCTCCTCGTTTCTCTGATCAACTTGCTGTTTCATCTGTTCTATCGCCTTCCCACAAGTCCGCGCTTCTTAATCAGCTGCAGAATAATAAGCAGAGCATGCTTTCTCCTATCAAGACAAATCTAATGTCTTCTCCAAAGAATGTGGAGCAACATTCTCTTCTGCAGCAAGCCTCGTCACCCCGAGGCGGAGAGCCTATTTCCCCAATGAATGCTCGAATGAAACAGCAGCTACATTCACGCAGCCTAAGCTCCCGTGATTTTGGATCTAGTCTGCCCCGTGATTTAATGCCGACTGATTCTGGTTCGCCATTAAGTCCATGGTCAAGTTGGGACCAGACCCATGGAAGCAAGGTGGATTGGTCAGTCCAATCAGATGAGTTAGGTCGGTTGAGAAAATCTCATTCCTTGGCTAATAACCCAAACAGGGAAGCAGATGTTTCATGGGCTCAGCAGATGTTAAAAGACTCTTCATCACCTAGGAACGGAAACCGTGTTGTGAACATGAATGGTGCAAGGCCATTGACTCAAGGTGGTTCGAGTGTGAATCCTCACAACAGTGACACTCGTGAGAGCGACATTCTTGATGCGTGGCTTGAACAGCTGCACCTAGATCGCTGAGCCTCAGCTGCGAGAGAGAGGTTCACATTTCTGTGAAGCTGTGAAACTGATGATTCGTTTATTTATTATTCAAGAAAGCAAACGGAAACAAAAGCAAACTCCGGGTAAGCTTTTTTCGATTCTAATAACCCTAAAAGGCTCAGTTTTTTCAGGCTTCTTTCTGAAATTTCTTTACTTTCTTATTTTTATCACCTCATTAAATTAATTATTGTATCATCTCTGTTGTAACAATGGCCAAAGTGCGCCTCTATTACTTCCCGGATTTCTGATTTACATTTTTTGTATCCTCTCAGTTTGTCAATTGTTTCTAATATCTCCTTCATATTTGTCAAAGAACACTGTATGAGAAATAATAACATATTGTTTCAGCTAATAAGATTCATTCATTTCCT
CDS Sequence
Protein Sequence