Information report for AT5G12400
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0009755 — acts upstream of or within — hormone-mediated signaling pathway
- GO:0048827 — acts upstream of or within — phyllome development
- GO:0009908 — acts upstream of or within — flower development
- GO:0031056 — acts upstream of or within — regulation of histone modification
- GO:0031010 — located in — ISWI-type complex
- GO:0051173 — acts upstream of or within — positive regulation of nitrogen compound metabolic process
- GO:0005634 — located in — nucleus
- GO:0010604 — acts upstream of or within — positive regulation of macromolecule metabolic process
- GO:0010468 — acts upstream of or within — regulation of gene expression
Functional Keywords
Literature and News
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- A plant-specific SWR1 chromatin-remodeling complex couples histone H2A.Z deposition with nucleosome sliding. DOI: 10.15252/embj.2019102008 ; PMID: 32115743
- Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis. DOI: 10.1105/tpc.19.00944 ; PMID: 32358072
Gene Resources
- UniProt: F4K0Y2
- EMBL: CP002688
- AlphaFoldDB: F4K0Y2
- EnsemblPlants: AT5G12400.1
- Gramene: AT5G12400.1
- KEGG: ath:AT5G12400
- Orthologous matrix: IDRHKPW
- ExpressionAtlas: AT5G12400
Sequences
cDNA Sequence
- >AT5G12400.1
CACACATCCTTTGACCATAAATAAGAAAAAAAGGTGAAAAAAAAAGAGTAGTGTGGGAGGGGGGAGAGAGAGAGAGAGAGATGGCCTTCTCTTCCTAACATTGACCAACCCGTCTTTGTTTCTTCTCATCATCACTGAGAGAATTCGTTAAGACGTTTCGTTTCTCTGTAGAAGAAGAATTCTCTTTCTACTTTTTTTTCTTTGCTTCCGAGAATTAAGAAGAGAGAGAATCTCTGTCCTTGTCTCTCTCTCCTTGCACGTTGCAAGCGTTTCTAGAATAAAGTGAAAACCCAGCGCTTCTCCTTTTTTTTTTGCAATCCAGAGAGACTTTGGCTATGGGTTTTCTTTGATTCGCTTGTATCGTGAAGCGAGAGCAAGCTTTTGTAGCAATGGAGCTGGTTGGTAAAGTCGTTAGGAAGGAGATCCAAGGGATTGGGTTTTGCTCCGGGACGGTTCGATCTCGCGATTCGTCTGGATTTTTCGAGATCGTTTATGAGAACGGTGTTACGGAGATTTCGGAATTGGATGAGGTTGTTGCTCTCGTGATGGGAGATGGTAAATCTCAGGAGAATTCGGTTCCAGTGAAGAAGAAGAGAGTTGGTAGGAAGCCGAAGAAACGGTCTCGTGTTGCGAGGGTGGTTGAGATCAAGCGAGAGAGCTCTGGGTTGAATGAGGTAAATGTCGATTTAAATGATGGAGTTGCGGAGAATTCGGGAGTTAGTGAGGAGAATTTGAGAGGGAATGTTGATTTGAATTGTGGTCCTGTGGAAACCCTAGGTAGGACATGGGACTCCTCTGTCACGGATTTGAATAGGACGGTGTCGGAATCGGAAACTGGATTTGATTTGACTACTGGGTTGGATTGGAATTCGAATGAAAATCTAGGTTTGGTTAATGTAAATATCGATTATGAAGAAAATTGTAGTGACAAACGGAAGTGGGATATTGATCTGAACATGGATGCGAGCTGTGATTTGGACAATGCTGCTATCTGTGATTTCAGTGGGCAGAAGAGGGAGGTAGGATTTGATTTGAACGTGGAGGTTGATGTAGAGAACAGCAAGGATGAGGAGTACAGTCAAATGAATGGAAATGACATTGTTCAAGAAATCAACATGCAGGACGGAAATGGTGCCCAGGATAATATTGAGACTGGGGAATATAAAGAAGTTCATGTTGCTGAAGTGTCCAGCGCTGAGCTTTTGGAGGAGATACAGAAGCAGAACATTGTTTCACCGCAAGATCTCAAGAATCTTAATTCTAATGGGGTTGAGAAGGATCCTGATCTACCTCATCATGATGCTAAGACTGTTGATGAGACTCTCTCTGATAGGGGAAATTCAGGTGAATATACAAGTGGTAGGAGGAAAAGAAGAAAAGCTTCTGACAATCCAAAATTCATGAGTGAACCTCAGTTGAGAAGAAGCGCTCGTAGAAGGTTAGCTCGATCGCCTGTCAGTAGTACTGTAACAGCTTGCTTTGTTGAGGAAGTATCCCCTTCTCCTTCAATTAGTAGTCTGACAGAGGAGAAAACTTGGATTGTTGATGGAAAAGCTGATAATATTTCTGCACTCCCGCCAAAGCCACAATTACCTCCATCCTCCCCTATTTTGGATTTAGACGGTCTTCCTGTACTTGATGTCTTTACTGCTTACTCTTGTCTGAGGTCCTTCAGTACTTTGCTGTTTTTGAGTCCTTTTGAGCTGAAGGATTTTGTGGAAGCATTGAGGTGCATGTCTCCTAGTCTATTATTTGATAGCATCCATGTTTCTGTCTTGCAAATATTAAGAAAACATTTGAAACAACTCGCTGCTGAAGGTGACCTATCTGCGTCTGCTTGTCTGAGGAGTCTTGATTGGGATACGTTGGATGTGGTTACATATCCCCTTTTTGTGGTTGAATACCTACTATGTTCTGGGTCCAAAGACAACCCTGGATTGGATCTTACTCGGCTGAACTTTTTCAGAAACGATTATTTCAGACAACCCGTGAATCTGAAAATTGAGATACTTAGTCGTTTGTGCGATGATATGACAGATGCTGAAGTCGTGAGGGCAGAGCTTAATAAAAGATCTTTTGCAGCTGAGTTTGAAATGGAACTTGATAGGAAGACGAACACAGAAGTGCGACGTAGAAAGCGAACTATGATGGAGCTGGCTGATGATTTTTCTTTAAATAACGAGGTCATTGATACTTCATTTGACCGGAACAGTGACGACTGCTGTTTCTGTAAAATGGATGGGAGCTTACTGTGCTGTGATGGTTGTCCGGCTGCATATCATTCTAAGTGTGTCGGTCTTGCCAGTCACCTTTTGCCTGAGGGGGACTGGTACTGTCCTGAATGTGCATTTGATCGGCGTGCACCAGGATTGAAGCCTGATAAGCAAATTCGAGGCGCAGAGTTTATAGAGATTGATCCGCATGGTCGAAAATACTACAGCAGTTGTGGCTACTTATTGGTGATAGATACAGATGGCACAGGCTCATTGAACTACTATCATGTGACTGATGTGAACCTTGTGCTGGAGCAGCTAAAGTCATGCAGTAGTTTCTATGCTGGCGTAGTAAGTGCAATTAGAAAACACTTGGATATCCCTGTTAGGCCAGTAAGGACAATCAGCGGTCTGAATTCCCAAATGTCTGTATGCATGGATAAGTCAGTCAAAGGAATGATTCCTTCGATTGATGGGTTTGGGGCTCCTCTACCAGCTTCAGAGAAACAGTCAACATCTGGTGCTAAAAAAAAGCTGAACAAAGCAACCAGCAATGGATGGTCACATAATCATGGTCCTAGGACTCGCCGGAAGATATCAGATTCAGCTACTGCGCTAGATATCCTTAATATGAGTTCTGAAGGATCTGCTGAAACTGTACAAAATGGTTCAGATGTCCAGAGACTTCATGAGCCAGCATCATCAAGCATGTTGGATATCATGAAAGAGCCAAATATGAATTCCCAAAATTTGGCTAAAATAAACACACGGAAAGGAACTAAACCAAATGTGCAGACTGAAACAGGCTACAGAAACCAATACATATTTGCTCAGATGACTAGATCAGTTTATGAAGAGATGATACGTAAGTCACCAATCCGTACCAATGATATGAGATCTGATGAAGAAATAGCTTCTACCCAGGTGAGGACTATATTGATGAAAACCACCAAATTTCAATGGCGAAACATCCAAAGTCTCTACCTAGATGCATGGAAAGAAAATTGTGGATGGTGTCATTCCTGCAAAAATTCTTCTGAGGATGCCGGTACTGAGATAAATTGTTTGTTTAATATGAGTCTCGGGGCTTTACGAGGTCTTTCGGAAAGTGAAGTAGCTAACATTCAATCCTTTGAGAAGAACAGTCATCTTCTGGCCATCATATGCCAGATTCTTTCCTTGGAAAGTCGACTACAAGGACTTTTGGTTGGTCCATGGTTGAATCCACAGCACTCCAGCTTTTGGCGTGAACACATTCTGAAGGCATCAAATATCTCAAGCTTGAAACATTTATTGGTTGATCTAGAGGCAAATTTGCATCATCGTGTACTTTCACTTGAGTGGCTAAGCCATGTCGATGCTGCCGTAGTGATGGGCTCAGCTATACATATTCTAATTGCTTCGACACGATCATGGTCAAAGACTGCTATTGGTAAAAGAAGGGGGACATTGTTGGATTCTGGGGTTAACCCTACTGCAAAGAAAAATGGTGGATTGACCATGTGCTGGTGGAGAGGCGGGCAACTTTCACGACGGTTATTCAATTGGAAGGTTTTACCTCGCGCTTTAATCTCGAAGGCTGCTAGACAAGGTGGAAGTATGAATATTCCAGGAATATTTTATCCGGAGAATTCAGAGTCTGCTAAGAGAAGCCGACGTGTTGCCTGGGAAGCAGCGGTGGAGTCATCTACGACTTCAGAGCAGCTCGGTTTGCAGATTAGGACACTCCAATCTTACATAAAGTGGGATGATATTGAAAACAGTCATCTTCTTCCTACATTAGACAAAGAATCCAGAAAATCTGCCAGGCTATTCAAAAAAGCAATTGTCCGTAGGAAGTGCACGGAGGAAGAGACTGTGAAATATCTCCTTGACTTTGGTAAGAGGAGAAATATTCCGGATGTTGTGTCGAAGAATGGTTGCATGGTTGAAGAATCCTCGAGTGGAAGAAAAAGGTTCTGGCTGAATGAATCACATGTGCCTTTACATCTTGTGAAAGGATTTGAAGAGAAAAAAGCTGTACGGAAAACTAGCAAGCCAGGAGGCTCTTTCAGACACTCTGAGATAGGAAAATTACGGAAAAGGTCCTCAGAGGGAAAAGGATTCTCATACCTATTTGAAAGGGCAGAAAGATCTGAATCCTCCTTGTGTGAGCAATGTAAGAAAGTTGTGCCTTTGAGTGAAGCTGCAAGCTGCCACATCTGCAAAGGAGTATTTCACAAAAAGCATATCAGGAGGGGAGAGAAGGAAGGCATGTACATATGTGTTCCATGCAAAAGTGAAGTGCTATCAAAAGAACAACCCACCGTACGAAAAAGAGGGCGGCCCCCTGGGAGTTTCCGGAAAAAAATTGGAGTTCAGACGCAAAAGCGTAAAAAAGTCATAGCTGCTCGCAAATCACCTCGGTTAAAGAAGACTAAGACTTCAATGGCAGAGAGAATTGCCATAAGGTTAAAGAATCATAAAAAGGTTGTTGCAAGCAAACCATTGCGACGTTCTGGCAGGCAATTGAAGCATGTTATTCGGCTGCAGGATGAAAGTAAAGTCCCTGAAGGGAGTAAGAAACGGAAACTGGAAACCAAAAGAGGCAGAGGTAGACCTAAGAAAGTAAAACAAGAGATCTCCATTAGAAAGGCGAGAACAGATAGGTGCTTGAACTATTGGTTAAATGGCCTCCTTTTGTCCCGAAAGGCTGGCAATGAACGGGTCCATCAGTTCCACAGAGAGAGATATTATGTTCCCTTGGAGAACTCTGATTCTGATCATGATCAACCTAAGTGTCACTTATGTGGCTCAATTGAATCTAAATCTGGATCAACTTTCATTTCTTGCGAATTATGTGGAGAATGGTACCACGGAGATGCTTATGGGCTTAATGAAAAGAATTCAAGTATGGTGATTGGATTCCGGTGTCATCTCTGTCGGAAACAGTCTTCTCCCACCTGTCCGCATATGAGATCTACTACATCACCTGTTGCATCCTAAGCTGTGAATTTGTTTGAGGCTGATCTAATATTCTTAGGCTGTGGGGATACAATTGGAAGAATCAGACAGGGCAAGGTGTAAATTTTTTGAGATGTCAATACAATTATGGGTGATGAGTATGAGTAGAGAATCAAGGAGAAGCAGAAACAGAGGAGGGTACATTTTGGTGGAAGCATGAAGTTAGTATGGCTTTGTTGGGACTGGTAGCTTGGATGAGTAGTACTAAAGTGGATTGGTTGACTTAGACTTAGAGTGAACAAAAAGGTGAACAAAAAGGGGATTTAAGAAGCAGAGTTAATTTATACCTGATTTAATTTTGCTTTTCATTATGGTGGGAGTCGTCAGTAAACAAGTGAAGATATGTAAAGAATATGTTGAATCCATTTTCTATCAAAATCCATTGGTAGTGGTCTTGTTAGCTCTCATATAGTCATGTTACCCTTCTCTCTTCTTCACAAAGGCTAACTACTTTTGCTCTCATTAGTGTACAATGGTGGATCCAAATGCTCAGCATATTACCATATTGACCAATTTCTCTCTTTTGTCTTGGTAATGTCCTTGAGATCAATCGGA
CDS Sequence
Protein Sequence