Gene Details:
- Gene ID: AT5G12350
- Gene Symbol: PRAF8, RLD2
- Gene Name:
- Description: Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein;(source:Araport11)
- TAIR Accession: locus:505006603
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0006893 — involved in — Golgi to plasma membrane transport
- GO:0003674 — enables — molecular_function
- GO:0005768 — located in — endosome
- GO:0005802 — is active in — trans-Golgi network
- GO:0010374 — involved in — stomatal complex development
- GO:0005794 — is active in — Golgi apparatus
Germplasm Phenotype:
- praf4t;5c;8c;9c — Extra numbers of stomatal lineage cells. Mutants resemble gn loss of function: they are dwarfed, produce fused cotyledons, and barely make any roots.
Function-related keywords:
Literature:
- Learning the lipid language of plant signalling. DOI: 10.1016/j.tplants.2004.06.008 ; PMID: 15358268
- Identification and structural characterization of FYVE domain-containing proteins of Arabidopsis thaliana. DOI: 10.1186/1471-2229-10-157 ; PMID: 20678208
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- Polar recruitment of RLD by LAZY1-like protein during gravity signaling in root branch angle control. DOI: 10.1038/s41467-019-13729-7 ; PMID: 31900388
- Connected function of PRAF/RLD and GNOM in membrane trafficking controls intrinsic cell polarity in plants. DOI: 10.1038/s41467-021-27748-w ; PMID: 35013279
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
Sequences:
cDNA Sequence
- >AT5G12350.1
TGTATAATCCGCCTTTTGGTCTCGCTCTCTCTCTTTTCTCTTTTTCTCTCTCTCTCTCTCGCTAGAAAACTGCGTAGTAGATCATGCCATGTCTCTAGATTCTCTGCCTCCCGATTCTTAGTCACTTTCTTCTCTCGCGTCTGCTCAAGAGAGTTTACCATTATCCTCAAGCCAACGCATTCTCTGATTTCTCTTCTTTGAAACGGCGCCTTTGTTTTTGAGCTATTCCGATCGATTTTGAAATCGATTTTGAGCTGAAAAAAAGTTGCTCTGCTTTTTAAGTCAGATGGAAGTAAATGTGTTGGAAGTTGCTTCGAGATCGACGATCATACTGATGATTTAGTTGATACCGTTAATGTAGATAGCCGTCGAATTTCTATTTTTCGCCTTTTAGCTTGAGCAAGTGTGGATTTCGTCGAGGTTTTTGATTGATGGAGGGTTTCGATTCTGAGAAGCTTCGTTGAGATTTTTTTTTGTGTATGTCGAGAAACGGAAGGATGGCTTCGGATCTTAGTAGAGCTGGTCCTGTGGAGAGAGATATCGAGCAGGCTATCATTGCCCTGAAAAAGGGAGCTTACTTGCTAAAGTATGGAAGAAGAGGGAAACCTAAGTTCTGCCCATTTCGCCTTTCTAATGATGAAACTGTTTTGATATGGTTCTCTGGAAACGAGGAGAAACATCTGAAGCTGAGCCATGTTTCTAGGATCATATCTGGACAACGCACTCCTATTTTTCAGAGGTATCCTCGTCCCGAGAAGGAATATCAGTCGTTTTCACTAATATATAGTGAGAGGTCTTTGGATGTGATATGTAAGGATAAAGATGAGGCTGAGGTGTGGTTTACTGGTCTTAAGGCCTTGATTTCGCATTGCCATCAAAGAAACAGGAGAACTGAATCAAGAAGTGACGGTACACCATCTGAAGCTAATAGCCCAAGAACATATACCCGGAGAAGCTCTCCTTTACATTCTCCATTTAGTAGCAATGACAGTTTGCAGAAGGATGGTTCTAATCACCTTCGTATTCATAGTCCATTTGAGAGCCCGCCTAAGAATGGCCTCGACAAGGCATTTTCGGACATGGCTTTATATGCAGTTCCTCCAAAAGGATTTTACCCCTCAGATTCTGCAACTATTTCTGTTCATTCTGGAGGCTCGGATAGCATGCATGGACATATGAGGGGTATGGGCATGGATGCCTTTAGAGTTAGTATGTCAAGTGCTGTTAGTTCCTCGAGCCATGGTTCTGGTCATGATGATGGAGATGCATTAGGAGATGTTTTCATCTGGGGAGAAGGCATAGGAGAAGGTGTTTTGGGTGGTGGAAACCGTAGAGTTGGTAGTTCATTTGATATAAAAATGGATTCCTTATTGCCAAAAGCTTTAGAATCTACAATAGTACTGGACGTCCAAAATATTGCTTGTGGTGGACAGCACGCTGTCCTCGTGACAAAACAAGGGGAAAGTTTTTCTTGGGGAGAGGAATCTGAAGGCAGGCTTGGCCACGGTGTTGATTCCAATATTCAACAACCAAAGCTCATCGATGCACTCAACACCACAAATATTGAGCTTGTAGCATGTGGTGAATTTCATAGTTGTGCAGTTACCCTATCAGGGGATTTGTATACCTGGGGTAAAGGAGATTTTGGTGTTCTTGGACATGGAAATGAAGTAAGTCACTGGGTCCCTAAGAGGGTTAATTTTCTGCTGGAAGGGATACATGTATCATCTATTGCTTGTGGACCTTACCACACAGCAGTCGTTACCTCTGCTGGGCAGTTGTTTACTTTTGGTGATGGGACCTTTGGTGTTTTAGGCCACGGAGACAAGAAAAGTGTTTTCATACCTCGGGAGGTAGACTCTTTGAAAGGTCTTCGCACTGTCCGGGCAGCTTGTGGTGTATGGCACACAGCAGCAGTTGTGGAAGTAATGGTTGGGAGCTCAAGCTCAAGTAATTGCTCTTCTGGAAAGCTCTTTACATGGGGTGATGGTGATAAGGGTCGTCTTGGTCATGGTAATAAAGAACCAAAACTTGTGCCTACCTGTGTTGCTGCTCTGGTTGAACCCAATTTTTGCCAAGTTGCATGTGGGCACAGTCTAACGGTTGCACTTACAACATCAGGCCATGTCTATACTATGGGCAGTCCTGTCTATGGTCAGCTTGGAAACTCACATGCAGACGGAAAAACTCCAAACCGTGTCGAAGGTAAACTTCACAAGAGTTTTGTCGAAGAGATAGCCTGTGGTGCTTATCATGTTGCAGTTTTAACTTCGAGGACTGAGGTTTACACTTGGGGAAAGGGATCAAATGGTAGACTTGGTCATGGAGATGTAGATGATAGAAATTCCCCGACATTGGTTGAGTCACTTAAGGATAAACAGGTGAAAAGTATTGCCTGTGGCACTAACTTCACAGCAGCTGTCTGCATTCACAGGTGGGCATCAGGGATGGACCAGTCCATGTGTTCAGGTTGCCGTCAGCCCTTCAGTTTTAAAAGAAAGAGGCACAATTGCTATAATTGCGGACTAGTGTTTTGCCACTCGTGCACTAGTAAAAAGTCATTGAAGGCTTGTATGGCACCGAACCCCAACAAACCATATCGAGTGTGTGATAAGTGTTTTAACAAATTGAAAAAGACCATGGAAACAGATCCATCATCCCATTCTTCTCTGAGTAGAAGAGGAAGCATTAACCAGGGATCAGATCCCATTGACAAAGATGACAAGTTCGATTCTAGATCCGATGGACAGTTAGCTAGATTTTCATTAATGGAATCCATGAGACAAGTGGACAGTCGACATAAGAAGAACAAGAAGTATGAATTCAATAGTAGTCGTGTCTCACCCATACCGAGTGGAAGCTCTCAACGGGGTGCACTTAACATAGCCAAGTCTTTCAATCCAGTATTTGGAGCATCAAAGAAGTTCTTCTCAGCTTCTGTTCCTGGTTCTCGAATTGTGTCTCGGGCAACTTCCCCAATATCGAGGCGTCCTAGTCCACCCCGGTCAACTACACCGACTCCCACTCTTTCAGGACTAGCCACACCAAAATTTGTAGTGGATGATACTAAGAGAACCAATGATAACCTAAGCCAAGAGGTCGTTAAGCTAAGATCTCAGGTTGAAAGTCTTACAAGGAAGGCCCAGCTTCAAGAAGTTGAGCTGGAAAGAACAACCAAGCAGCTAAAAGAGGCGTTGGCAATAACTAATGAAGAAACGACAAGATGCAAGGCAGCAAAAGAAGTGATCAAATCACTTACCGCTCAATTAAAAGACATGGCCGAAAGATTACCCGTTGGATCAGCTCGGACTGTGAAGTCTCCTCCTTCTCTTAACTCATTTGGTTCCAGCCCTGGTCGCATTGACCCTTTTAATATCTTAAACCAAGCAAATAGCCAAGAATCCGAGCCAAATGGCATCACGACCCCAATGTTTTCTAATGGGACCATGACACCTGCATTTGGGAATGGTGAAGCAACGAATGAAGCACGGAACGAGAAGGAATGGGTTGAACAAGATGAACCTGGTGTCTATATCACTCTTACAGCCTTAGCCGGAGGTGCTAGAGATCTCAAACGCGTCCGTTTCAGCCGAAAAAGGTTTAGTGAGATACAAGCAGAACAGTGGTGGGCAGATAACAGAGGAAGAGTCTATGAACAATACAATGTTCGCATGGTTGACAAAGCCAGTGAGGACTTGCCTCGCTGAAACTCTTTAACACCAACCAGTTGTCTATTTTTTTCCTATGCCCGATTCAGGTGAGTGCAGAATCTCGGGATATAACAACAGATATATATAGAGAGAAATTAGATGTTTTTAAGTGCTTTCATTGTAGTTTGGGATTTGTGTGGTGTTGTTTGTGATAAAGTTGTAAATTCTTTGTGGTTAAATCATTCTGTAAATCCTATAAAACATACAGTGTTTTTACCCCCTAGAAACAATGCTGAGTAATTGGATTTCGAGC
CDS Sequence
Protein Sequence