Information report for AT5G12330
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0005515 — enables — protein binding
- GO:0045893 — involved in — positive regulation of DNA-templated transcription
- GO:0009733 — acts upstream of or within — response to auxin
- GO:0003677 — enables — DNA binding
- GO:0048364 — acts upstream of or within — root development
- GO:0005634 — located in — nucleus
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0048653 — acts upstream of or within — anther development
- GO:0009555 — acts upstream of or within — pollen development
- GO:0042803 — enables — protein homodimerization activity
- GO:0005634 — is active in — nucleus
- CS2110106 — strong gynoecial, anther, leaf and vascular defects
- CS2110107 — strong gynoecial, anther, leaf and vascular defects
- sty1-1,sty2-1, shi-2, shi-3, lrp1 — 18-25% of flowers have homeotic conversion petals/anthers with fused characteristics. Anther locules are abnormal. Tapetal development is abnormal with reduced pollen viability.
Functional Keywords
Literature and News
- The beta-subunit of the Arabidopsis G protein negatively regulates auxin-induced cell division and affects multiple developmental processes. DOI: 10.1105/tpc.006148 ; PMID: 12566580
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Functionally redundant SHI family genes regulate Arabidopsis gynoecium development in a dose-dependent manner. DOI: 10.1111/j.1365-313X.2006.02774.x ; PMID: 16740146
- Regulation of root elongation by histone acetylation in Arabidopsis. DOI: 10.1016/j.jmb.2008.09.040 ; PMID: 18835563
- and Post-meiotic Anther Processes in Auxin Sensing Domains in Arabidopsis. DOI: 10.3389/fpls.2018.00150 ; PMID: 29491878
- The COP1 Target SHI-RELATED SEQUENCE5 Directly Activates Photomorphogenesis-Promoting Genes. DOI: 10.1105/tpc.18.00455 ; PMID: 30150309
- Auxin signaling modulates LATERAL ROOT PRIMORDIUM1 (LRP1) expression during lateral root development in Arabidopsis. DOI: 10.1111/tpj.14520 ; PMID: 31483536
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
Sequences
cDNA Sequence
- >AT5G12330.4
AAATAAAATTAAACCAACAAAAATTCACTTGCCTTATTCTATCTTTCTGCAGTTGTCCATGATGATAATTAGAGAGAGACAGGAACAAGACGAAACAATCTAGAACAAGAAACCAAAACATACACCACTTCTGTTTTTAAAAAGGTAAAAAAGATCAAGAAGAAACCAAAGAAAATCAGACAGCAACAAGAAAAGATCAGTTGTTAAGAGAAGGAAAGTAGGAAACGGGTCAGATTGTTAGATAGAGAGAGGAAGCGAAGAAAAAGAGTCGCAGTGTTCTTTTTCCACTGCGTGTGAGCAGAGATAGTGACAGAAGATTTCGAAAAAATCTATTTTGGATTTGTTTTTGTTTTTGGTTTTATAGCAATTAGGATCCATCTTCATCTTTCTCTATCAAAGCTCAGATTTGTGTAGATTTATGGGTTATGTACATTGGAGCTTTGTGCTCTGTGGCTACAACGAGGAGGCATAATCTACCGACGTCGGATTCCGGTGCGTTCACCGACTGGGCGGCCACGACGACGACACCTTCCCGTGCCACCGAGGATCTCTCTCTTGGTTTCAATGCTGGTTCCTCCGTCATCCACGGTGGTTTAGGCTCAGCTTCCGTCGCCGCCGGCGTTCCATCATGGCCTCCGGGATCTTCTGTCCGTTACGGCCTACCTTCTTCGGCGGCGGCGACGGAGATGGGCATGGTTGGTCTAAGAGATGTATTCCTTGTTGCTCCGGCTTATCACCACCAGAACGCCGGAGTGATATCTGGATCCGATCATATGAACAGTAATGCAGCTGCGGCGGCGGCGCTCGGTGTCGGAGTGATTCCTCTACTCACGGCGGGTACACCGCAGCAAAACGTGGAAGACTCCGACATTAACTTCCTCGGAAACAACCGGAGATGGCAGAATAACAACAACAACCACGAAACGCAGTATCTTCACTTCAAGAGTACTAACCAGACAACGGTCGGAACGAGCTCGAACAACTCGGGGTCTGGCTCAGGCGCATCAGGAACCGCCACGTGTCAAGACTGTGGAAATCAGGCGAAGAAAGAGTGTAAGCAGAGGCGGTGTAGGACTTGCTGCAAGAGCCGTGGCTTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTCTCTGCTGCTCGGCGGAGAGAGAGGCAGGTCATGCCTACCGGCGCTAATCCAACGGCTGGCTCGTCTCTTTCGACCTCCTCCGGGACGAAGAAGCCGAGGATCGTAGGGTCTCAACAACAACAACAACAACAAGCCACTTCTCATACTTCAACTTCTAACACACCACCTCAAAGTTTCGAGACCAGCTCCAGCCGACAAGACGGAGGAGGGTCAAGGGAAGCATGGCCAGGGCAGGTTAGGGCAGCGGCGGTGTTCAAGTGTGTTAGAGTAACGGCAGTGGAGGACGGGGATGATGAGTACGCGTACCAAGCGGTGGTGAAAATCGGCGGCCATGTCTTTAAAGGATTCTTGTACGATCAAGGGCTTGAACCAAAAGAAGGTTTTCCTAGTATGTCGGATTTGCATTTAGGTGGTTCAGCCAATAACCATAACGGAGTTTCTGCCTCGGCGCCTATTCTCGACCCGCCTAATGTTGTTTATGGTGGTGGTGGAGGTTCAGGCGGTGGGTTTTACAGTTAAACCAAATTCAAGAAAGTTTACTGTTTTAAAGAAAAGATTTTCTCTAATGTTTTTATCCAGTGGGGTTAGATACAAACGAATATTTCACTGTTGTATGAATTGTCCATTTGGACAAACTACTTCTAATGCTGCAACAGACGACGTATCGACAGATTTTATTTTACTTAACTGGTAGTGTATAAACACCTAACGTTTTGCTTGAAATGGCGTTTTTTTTAAGTATAGATCTCATGTATTCCTAGGACTGAAACACCCGCACGAAAATATGCGGCAACTCATACATAAAACCATATTTGTTTGTT - >AT5G12330.2
AAATAAAATTAAACCAACAAAAATTCACTTGCCTTATTCTATCTTTCTGCAGTTGTCCATGATGATAATTAGAGAGAGACAGGAACAAGACGAAACAATCTAGAACAAGAAACCAAAACATACACCACTTCTGTTTTTAAAAAGGTAAAAAAGATCAAGAAGAAACCAAAGAAAATCAGACAGCAACAAGAAAAGATCAGTTGTTAAGAGAAGGAAAGTAGGAAACGGGTCAGATTGTTAGATAGAGAGAGGAAGCGAAGAAAAAGAGTCGCAGTGTTCTTTTTCCACTGCGTGTGAGCAGAGATAGTGACAGAAGATTTCGAAAAAATCTATTTTGGATTTGTTTTTGTTTTTGGTTTTATAGCAATTAGGATCCATCTTCATCTTTCTCTATCAAAGCTCAGATTTGTGTAGATTTATGGGTTATGTACATTGGAGCTTTGTGCTCTGTGGCTACAACGAGGAGGCATAATCTACCGACGTCGGATTCCGGTGCGTTCACCGACTGGGCGGCCACGACGACGACACCTTCCCGTGCCACCGAGGATCTCTCTCTTGGTTTCAATGCTGGTTCCTCCGTCATCCACGGTGGTTTAGGCTCAGCTTCCGTCGCCGCCGGCGTTCCATCATGGCCTCCGGGATCTTCTGTCCGTTACGGCCTACCTTCTTCGGCGGCGGCGACGGAGATGGGCATGGTTGGTCTAAGAGATGTATTCCTTGTTGCTCCGGCTTATCACCACCAGAACGCCGGAGTGATATCTGGATCCGATCATATGAACAGTAATGCAGCTGCGGCGGCGGCGCTCGGTGTCGGAGTGATTCCTCTACTCACGGCGGGTACACCGCAGCAAAACGTGGAAGACTCCGACATTAACTTCCTCGGAAACAACCGGAGATGGCAGAATAACAACAACAACCACGAAACGCAGTATCTTCACTTCAAGAGTACTAACCAGACAACGGTCGGAACGAGCTCGAACAACTCGGGGTCTGGCTCAGGCGCATCAGGAACCGCCACGTGTCAAGACTGTGGAAATCAGGCGAAGAAAGAGTGTAAGCAGAGGCGGTGTAGGACTTGCTGCAAGAGCCGTGGCTTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTCTCTGCTGCTCGGCGGAGAGAGAGGCAGGTCATGCCTACCGGCGCTAATCCAACGGCTGGCTCGTCTCTTTCGACCTCCTCCGGGACGAAGAAGCCGAGGATCGTAGGGTCTCAACAACAACAACAACAACAAGCCACTTCTCATACTTCAACTTCTAACACACCACCTCAAAGTTTCGAGACCAGCTCCAGCCGACAAGACGGAGGAGGGTCAAGGGAAGCATGGCCAGGGCAGGTTAGGGCAGCGGCGGTGTTCAAGTGTGTTAGAGTAACGGCAGTGGAGGACGGGGATGATGAGTACGCGTACCAAGCGGTGGTGAAAATCGGCGGCCATGTCTTTAAAGGATTCTTGTACGATCAAGGGCTTGAACCAAAAGAAGGTTTTCCTAGTATGTCGGATTTGCATTTAGGTGGTTCAGCCAATAACCATAACGGAGTTTCTGCCTCGGCGCCTATTCTCGACCCGCCTAATGTTGTTTATGGTGGTGGTGGAGGTTCAGGCGGTGGGTTTTACAGTTAAACCAAATTCAAGAAAGTTTACTGTTTTAAAGAAAAGATTTTCTCTAATGTTTTTATCCAGTGGGGTTAGATACAAACGAATATTTCACTGTTGTATGAATTGTCCATTTGGACAAACTACTTCTAATGCTGCAACAGACGACGTATCGACAGATTTTATTTTACTTAACTGGTAGTGTATAAACACCTAACGTTTTGCTTGAAATGGCGTTTTTTTTAAGTATAGATCTCATGTATTCCTAGGACTGAAACACCCGCACGAAAATATGCGGCAACTCATACATAAAACCATATTTGTTTGTT - >AT5G12330.3
AAATAAAATTAAACCAACAAAAATTCACTTGCCTTATTCTATCTTTCTGCAGTTGTCCATGATGATAATTAGAGAGAGACAGGAACAAGACGAAACAATCTAGAACAAGAAACCAAAACATACACCACTTCTGTTTTTAAAAAGGTAAAAAAGATCAAGAAGAAACCAAAGAAAATCAGACAGCAACAAGAAAAGATCAGTTGTTAAGAGAAGGAAAGTAGGAAACGGGTCAGATTGTTAGATAGAGAGAGGAAGCGAAGAAAAAGAGTCGCAGTGTTCTTTTTCCACTGCGTGTGAGCAGAGATAGTGACAGAAGATTTCGAAAAAATCTATTTTGGATTTGTTTTTGTTTTTGGTTTTATAGCAATTAGGATCCATCTTCATCTTTCTCTATCAAAGCTCAGATTTGTGTAGATTTATGGGTTATGTACATTGGAGCTTTGTGCTCTGTGGCTACAACGAGGAGGCATAATCTACCGACGTCGGATTCCGGTGCGTTCACCGACTGGGCGGCCACGACGACGACACCTTCCCGTGCCACCGAGGATCTCTCTCTTGGTTTCAATGCTGGTTCCTCCGTCATCCACGGTGGTTTAGGCTCAGCTTCCGTCGCCGCCGGCGTTCCATCATGGCCTCCGGGATCTTCTGTCCGTTACGGCCTACCTTCTTCGGCGGCGGCGACGGAGATGGGCATGGTTGGTCTAAGAGATGTATTCCTTGTTGCTCCGGCTTATCACCACCAGAACGCCGGAGTGATATCTGGATCCGATCATATGAACAGTAATGCAGCTGCGGCGGCGGCGCTCGGTGTCGGAGTGATTCCTCTACTCACGGCGGGTACACCGCAGCAAAACGTGGAAGACTCCGACATTAACTTCCTCGGAAACAACCGGAGATGGCAGAATAACAACAACAACCACGAAACGCAGTATCTTCACTTCAAGAGTACTAACCAGACAACGGTCGGAACGAGCTCGAACAACTCGGGGTCTGGCTCAGGCGCATCAGGAACCGCCACGTGTCAAGACTGTGGAAATCAGGCGAAGAAAGAGTGTAAGCAGAGGCGGTGTAGGACTTGCTGCAAGAGCCGTGGCTTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTCTCTGCTGCTCGGCGGAGAGAGAGGCAGGTCATGCCTACCGGCGCTAATCCAACGGCTGGCTCGTCTCTTTCGACCTCCTCCGGGACGAAGAAGCCGAGGATCGTAGGGTCTCAACAACAACAACAACAACAAGCCACTTCTCATACTTCAACTTCTAACACACCACCTCAAAGTTTCGAGACCAGCTCCAGCCGACAAGACGGAGGAGGGTCAAGGGAAGCATGGCCAGGGCAGGTTAGGGCAGCGGCGGTGTTCAAGTGTGTTAGAGTAACGGCAGTGGAGGACGGGGATGATGAGTACGCGTACCAAGCGGTGGTGAAAATCGGCGGCCATGTCTTTAAAGGATTCTTGTACGATCAAGGGCTTGAACCAAAAGAAGGTTTTCCTAGTATGTCGGATTTGCATTTAGGTGGTTCAGCCAATAACCATAACGGAGTTTCTGCCTCGGCGCCTATTCTCGACCCGCCTAATGTTGTTTATGGTGGTGGTGGAGGTTCAGGCGGTGGGTTTTACAGTTAAACCAAATTCAAGAAAGTTTACTGTTTTAAAGAAAAGATTTTCTCTAATGTTTTTATCCAGTGGGGTTAGATACAAACGAATATTTCACTGTTGTATGAATTGTCCATTTGGACAAACTACTTCTAATGCTGCAACAGACGACGTATCGACAGATTTTATTTTACTTAACTGGTAGTGTATAAACACCTAACGTTTTGCTTGAAATGGCGTTTTTTTTAAGTATAGATCTCATGTATTCCTAGGACTGAAACACCCGCACGAAAATATGCGGCAACTCATACATAAAACCATATTTGTTTGTT - >AT5G12330.1
AAATAAAATTAAACCAACAAAAATTCACTTGCCTTATTCTATCTTTCTGCAGTTGTCCATGATGATAATTAGAGAGAGACAGGAACAAGACGAAACAATCTAGAACAAGAAACCAAAACATACACCACTTCTGTTTTTAAAAAGGTAAAAAAGATCAAGAAGAAACCAAAGAAAATCAGACAGCAACAAGAAAAGATCAGTTGTTAAGAGAAGGAAAGTAGGAAACGGGTCAGATTGTTAGATAGAGAGAGGAAGCGAAGAAAAAGAGTCGCAGTGTTCTTTTTCCACTGCGTGTGAGCAGAGATAGTGACAGAAGATTTCGAAAAAATCTATTTTGGATTTGTTTTTGTTTTTGGTTTTATAGCAATTAGGATCCATCTTCATCTTTCTCTATCAAAGCTCAGATTTGTGTAGATTTATGGGTTATGTACATTGGAGCTTTGTGCTCTGTGGCTACAACGAGGAGGCATAATCTACCGACGTCGGATTCCGGTGCGTTCACCGACTGGGCGGCCACGACGACGACACCTTCCCGTGCCACCGAGGATCTCTCTCTTGGTTTCAATGCTGGTTCCTCCGTCATCCACGGTGGTTTAGGCTCAGCTTCCGTCGCCGCCGGCGTTCCATCATGGCCTCCGGGATCTTCTGTCCGTTACGGCCTACCTTCTTCGGCGGCGGCGACGGAGATGGGCATGGTTGGTCTAAGAGATGTATTCCTTGTTGCTCCGGCTTATCACCACCAGAACGCCGGAGTGATATCTGGATCCGATCATATGAACAGTAATGCAGCTGCGGCGGCGGCGCTCGGTGTCGGAGTGATTCCTCTACTCACGGCGGGTACACCGCAGCAAAACGTGGAAGACTCCGACATTAACTTCCTCGGAAACAACCGGAGATGGCAGAATAACAACAACAACCACGAAACGCAGTATCTTCACTTCAAGAGTACTAACCAGACAACGGTCGGAACGAGCTCGAACAACTCGGGGTCTGGCTCAGGCGCATCAGGAACCGCCACGTGTCAAGACTGTGGAAATCAGGCGAAGAAAGAGTGTAAGCAGAGGCGGTGTAGGACTTGCTGCAAGAGCCGTGGCTTTGATTGTTCTACTCACGTGAAGAGCACGTGGGTCTCTGCTGCTCGGCGGAGAGAGAGGCAGGTCATGCCTACCGGCGCTAATCCAACGGCTGGCTCGTCTCTTTCGACCTCCTCCGGGACGAAGAAGCCGAGGATCGTAGGGTCTCAACAACAACAACAACAACAAGCCACTTCTCATACTTCAACTTCTAACACACCACCTCAAAGTTTCGAGACCAGCTCCAGCCGACAAGACGGAGGAGGGTCAAGGGAAGCATGGCCAGGGCAGGTTAGGGCAGCGGCGGTGTTCAAGTGTGTTAGAGTAACGGCAGTGGAGGACGGGGATGATGAGTACGCGTACCAAGCGGTGGTGAAAATCGGCGGCCATGTCTTTAAAGGATTCTTGTACGATCAAGGGCTTGAACCAAAAGAAGGTTTTCCTAGTATGTCGGATTTGCATTTAGGTGGTTCAGCCAATAACCATAACGGAGTTTCTGCCTCGGCGCCTATTCTCGACCCGCCTAATGTTGTTTATGGTGGTGGTGGAGGTTCAGGCGGTGGGTTTTACAGTTAAACCAAATTCAAGAAAGTTTACTGTTTTAAAGAAAAGATTTTCTCTAATGTTTTTATCCAGTGGGGTTAGATACAAACGAATATTTCACTGTTGTATGAATTGTCCATTTGGACAAACTACTTCTAATGCTGCAACAGACGACGTATCGACAGATTTTATTTTACTTAACTGGTAGTGTATAAACACCTAACGTTTTGCTTGAAATGGCGTTTTTTTTAAGTATAGATCTCATGTATTCCTAGGACTGAAACACCCGCACGAAAATATGCGGCAACTCATACATAAAACCATATTTGTTTGTT
CDS Sequence
Protein Sequence