Gene Details:

  • Gene ID: AT5G12080
  • Gene Symbol: ATMSL10, MscS-LIKE 10, MSL10
  • Gene Name: mechanosensitive channel of small conductance-like 10
  • Description: mechanosensitive channel of small conductance-like 10;(source:Araport11)
  • TAIR Accession: locus:2143069
  • Genome: Araport11_genome_release
  • Species: Arabidopsis thaliana

Transcripts:

Plant Ontology Annotations:

  • PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
  • PO:0000025  — root tip — punta de la raíz (Spanish, exact), 根端 (Japanese, exact)
  • PO:0000036  — leaf vascular system — sistema vascular de la hoja (Spanish, exact), 葉維管系 (Japanese, exact), leaf venation (related)
  • PO:0003011  — root vascular system — sistema vascular de la raíz (Spanish, exact), 根維管系 (Japanese, exact), root vein (related)

Gene Ontology:

  • GO:0005886  — located in — plasma membrane
  • GO:0097468  — acts upstream of or within — programmed cell death in response to reactive oxygen species
  • GO:0005886  — is active in — plasma membrane
  • GO:0010150  — acts upstream of or within — leaf senescence
  • GO:0005634  — located in — nucleus
  • GO:0006820  — acts upstream of or within — monoatomic anion transport
  • GO:0008381  — enables — mechanosensitive monoatomic ion channel activity
  • GO:0006820  — involved in — monoatomic anion transport
  • GO:0050982  — acts upstream of or within — detection of mechanical stimulus
  • GO:0050982  — involved in — detection of mechanical stimulus

Germplasm Phenotype:

  • CS69760  — No visible phenotype
  • CS72414  — Accumulation of anthocyanin in young and developing leaves. Adult plants exhibit several morphological abnormalities including stunted growth, shorter petioles and loss of apical dominance resulting in a bushy phenotype. Plants also display spontaneous cell death and hyperaccumulation of jasmonic acid (JA) in response to wounding.
  • CS73273  — dwarfed; leaves exhibit visible lesions of dead cells
  • CS73274  — dwarfed; leaves exhibit visible lesions of dead cells
  • CS73277  — dwarfed; leaves exhibit visible lesions of dead cells
  • CS73278  — dwarfed; leaves exhibit visible lesions of dead cells
  • CS73289  — dwarfed
  • CS73290  — dwarfed
  • CS73291  — moderate height and reduced ectopic cell death compared to parental msl10-3G mutant plants (suppression of msl10-3G phenotypes)
  • CS73292  — moderate height and reduced ectopic cell death compared to parental msl10-3G mutant plants (suppression of msl10-3G phenotypes)
  • CS73296  — dwarfed
  • CS73298  — moderate height
  • CS73300  — moderate height
  • CS73303  — dwarfed
  • CS73306  — dwarfed
  • CS73309  — dwarfed
  • CS73312  — dwarfed
  • CS73317  — dwarfed
  • CS73319  — dwarfed
  • CS73321  — dwarfed
  • CS73327  — dwarfed
  • CS73328  — dwarfed
  • CS73329  — dwarfed
  • CS73330  — dwarfed
  • CS73331  — dwarfed
  • CS73332  — dwarfed
  • CS73333  — moderate height (taller than untransformed msl10-3G plants); amount of ectopic cell death suppressed compared to the msl10-3G mutant
  • CS73334  — moderate height (taller than untransformed msl10-3G plants); amount of ectopic cell death suppressed compared to the msl10-3G mutant
  • CS73335  — moderate height (taller than untransformed msl10-3G plants); amount of ectopic cell death suppressed compared to the msl10-3G mutant
  • CS73336  — moderate height (taller than untransformed msl10-3G plants); amount of ectopic cell death suppressed compared to the msl10-3G mutant
  • CS73337  — moderate height (taller than untransformed msl10-3G plants); amount of ectopic cell death suppressed compared to the msl10-3G mutant
  • CS73338  — moderate height (taller than untransformed msl10-3G plants); amount of ectopic cell death suppressed compared to the msl10-3G mutant
  • SALK_076254  — Shifts single-channel amplitude peak from 10pa (WT) to 7.3pa
  • msl4-1; msl5-2; msl6-1; msl9-1; msl10-1  — Abolished stretch-activate mechanosensitive channel activity
  • msl9-1; msl10-1  — Reduced stretch-activated mechanosensitive channel activity.

Literature:

Sequences:

cDNA Sequence
  • >AT5G12080.3
    CAATTACATTTCCCAATTAATTTTTGTGGCTTATAAAGTCTTGACATCTCTTTGCTCTTTGGACCCGCCTTAATGTTTTTTTGTTCATGTCTTCTTCTTCTTCTTCAAGAATGAGCTAATACTCACAGAAGAAGAAGATTTTTCTTTGGATTTTTCACTACTGAGGCATTGTTGTGAAATTGGATGGTAGTAGCATTGGAATGGCAGAACAAAAGAGTAGTAACGGAGGAGGAGGAGGAGGAGATGTTGTTATCAATGTTCCAGTTGAGGAAGCATCAAGGCGTTCCAAGGAAATGGCTTCACCAGAGTCTGAGAAAGGAGTTCCCTTTAGTAAAAGCCCTTCTCCTGAAATCTCTAAGCTTGTTGGTAGTCCTAACAAGCCTCCTAGAGCTCCAAATCAGAACAATGTGGGTCTAACTCAGAGGAAATCTTTTGCAAGGTCGGTTTACTCAAAACCCAAGTCCCGGTTTGTTGATCCATCTTGTCCTGTAGACACAAGTATTCTAGAGGAGGAAGTTAGGGAGCAACTTGGTGCTGGTTTTTCTTTTAGTAGAGCTTCTCCGAATAACAAATCTAATAGGAGTGTCGGGTCACCAGCACCGGTTACTCCAAGTAAAGTCGTTGTTGAGAAAGATGAGGATGAGGAAATCTACAAGAAGGTTAAGCTGAACAGAGAGATGCGCAGTAAGATAAGTACATTGGCTTTGATAGAGTCAGCTTTCTTTGTGGTGATTTTGAGCGCTTTGGTTGCGAGTTTAACCATTAATGTCCTGAAACATCACACCTTCTGGGGGCTAGAAGTCTGGAAATGGTGTGTGCTTGTGATGGTTATATTCAGTGGAATGTTGGTGACAAACTGGTTCATGCGTTTGATTGTGTTCCTCATAGAAACAAACTTTCTTTTGAGGAGAAAAGTGCTCTACTTTGTGCACGGCTTGAAGAAGAGCGTCCAAGTTTTCATTTGGCTCTGCTTGATTCTTGTTGCTTGGATATTGTTGTTCAACCACGACGTGAAACGGTCCCCCGCAGCCACCAAAGTCCTCAAATGTATTACCAGGACTCTTATTTCCATTCTTACAGGGGCATTCTTTTGGCTGGTGAAAACACTCTTGTTGAAAATCCTTGCAGCGAATTTCAACGTCAATAACTTTTTCGATAGGATTCAAGATTCTGTTTTCCACCAGTATGTTCTACAAACGCTCTCGGGTCTTCCACTTATGGAAGAGGCAGAGAGGGTCGGGCGTGAGCCAAGCACAGGCCATTTGAGTTTCGCGACTGTAGTGAAAAAAGGAACGGTTAAAGAGAAGAAAGTGATTGATATGGGGAAAGTTCATAAGATGAAGCGGGAGAAAGTTTCGGCTTGGACTATGCGAGTTTTGATGGAAGCGGTTAGAACTTCAGGTCTCTCTACTATCTCTGACACATTGGACGAAACAGCATACGGCGAGGGGAAAGAGCAAGCTGACAGAGAAATTACTAGTGAGATGGAGGCTTTGGCTGCTGCTTACCATGTCTTCAGAAATGTTGCTCAGCCCTTCTTCAATTACATAGAGGAAGAGGACTTGCTTAGGTTTATGATTAAGGAAGAGGTTGATCTTGTGTTCCCATTGTTTGATGGTGCCGCTGAGACCGGGAGAATTACAAGAAAAGCTTTCACAGAATGGGTGGTTAAGGTGTACACGAGCCGGAGAGCTTTAGCGCATTCCTTAAACGACACAAAAACAGCGGTTAAGCAGTTAAACAAACTTGTGACAGCAATCTTGATGGTGGTTACCGTTGTCATTTGGCTGCTCCTTCTAGAAGTAGCAACGACTAAGGTTTTGCTGTTCTTCTCCACCCAACTCGTGGCTCTGGCTTTTATAATCGGAAGCACATGCAAAAACCTCTTTGAATCCATTGTGTTCGTATTCGTCATGCATCCTTATGATGTCGGTGATCGATGTGTTGTTGACGGTGTCGCGATGCTGGTGGAAGAAATGAATCTCTTAACGACAGTGTTCTTGAAGCTTAACAACGAGAAAGTGTATTATCCGAACGCTGTTTTGGCCACGAAACCGATAAGCAATTACTTCAGAAGTCCGAATATGGGAGAAACAGTGGAATTCTCTATCTCTTTCTCGACACCAGTCTCTAAGATAGCACATCTCAAAGAAAGAATCGCCGAGTACTTGGAGCAGAACCCGCAACATTGGGCACCGGTTCACTCGGTGGTGGTGAAGGAGATAGAGAACATGAACAAGCTGAAGATGGCCCTATACAGTGACCACACCATCACGTTTCAGGAAAACAGAGAGAGGAATCTTAGAAGAACCGAACTTTCTTTGGCCATTAAGAGAATGTTGGAGGACCTTCACATCGACTACACTCTCCTTCCTCAAGACATTAATCTCACAAAGAAGAACTGATGAGAACCAATTTAAAACCGGTTTGGTGTTTTTTCTAAACCGTTGTTATAAGACATTATTATTACCAAACGTTGTGATACTGTTTTGTTTAAGGCTTTTAGAGTAGATGATGAAATCAATTTTCTAAACCGACTCAACTTTTATGGATTTTACAAAATTAGGCATTTTATGGATAAAAATCTTAGTCTTTGAAAATCTGAATAAAATGCAAGATCTGTCAAAAATGATTTGTCATGTATTGATTGTACAAAAGTTTTGTTACAAAATAAGAAGAAAAGTCTTATGTGAG
  • >AT5G12080.2
    CAATTACATTTCCCAATTAATTTTTGTGGCTTATAAAGTCTTGACATCTCTTTGCTCTTTGGACCCGCCTTAATGTTTTTTTGTTCATGTCTTCTTCTTCTTCTTCAAGAATGAGCTAATACTCACAGAAGAAGAAGATTTTTCTTTGGATTTTTCACTACTGAGGCATTGTTGTGAAATTGGATGGTAGTAGCATTGGAATGGCAGAACAAAAGAGTAGTAACGGAGGAGGAGGAGGAGGAGATGTTGTTATCAATGTTCCAGTTGAGGAAGCATCAAGGCGTTCCAAGGAAATGGCTTCACCAGAGTCTGAGAAAGGAGTTCCCTTTAGTAAAAGCCCTTCTCCTGAAATCTCTAAGCTTGTTGGTAGTCCTAACAAGCCTCCTAGAGCTCCAAATCAGAACAATGTGGGTCTAACTCAGAGGAAATCTTTTGCAAGGTCGGTTTACTCAAAACCCAAGTCCCGGTTTGTTGATCCATCTTGTCCTGTAGACACAAGTATTCTAGAGGAGGAAGTTAGGGAGCAACTTGGTGCTGGTTTTTCTTTTAGTAGAGCTTCTCCGAATAACAAATCTAATAGGAGTGTCGGGTCACCAGCACCGGTTACTCCAAGTAAAGTCGTTGTTGAGAAAGATGAGGATGAGGAAATCTACAAGAAGGTTAAGCTGAACAGAGAGATGCGCAGTAAGATAAGTACATTGGCTTTGATAGAGTCAGCTTTCTTTGTGGTGATTTTGAGCGCTTTGGTTGCGAGTTTAACCATTAATGTCCTGAAACATCACACCTTCTGGGGGCTAGAAGTCTGGAAATGGTGTGTGCTTGTGATGGTTATATTCAGTGGAATGTTGGTGACAAACTGGTTCATGCGTTTGATTGTGTTCCTCATAGAAACAAACTTTCTTTTGAGGAGAAAAGTGCTCTACTTTGTGCACGGCTTGAAGAAGAGCGTCCAAGTTTTCATTTGGCTCTGCTTGATTCTTGTTGCTTGGATATTGTTGTTCAACCACGACGTGAAACGGTCCCCCGCAGCCACCAAAGTCCTCAAATGTATTACCAGGACTCTTATTTCCATTCTTACAGGGGCATTCTTTTGGCTGGTGAAAACACTCTTGTTGAAAATCCTTGCAGCGAATTTCAACGTCAATAACTTTTTCGATAGGATTCAAGATTCTGTTTTCCACCAGTATGTTCTACAAACGCTCTCGGGTCTTCCACTTATGGAAGAGGCAGAGAGGGTCGGGCGTGAGCCAAGCACAGGCCATTTGAGTTTCGCGACTGTAGTGAAAAAAGGAACGGTTAAAGAGAAGAAAGTGATTGATATGGGGAAAGTTCATAAGATGAAGCGGGAGAAAGTTTCGGCTTGGACTATGCGAGTTTTGATGGAAGCGGTTAGAACTTCAGGTCTCTCTACTATCTCTGACACATTGGACGAAACAGCATACGGCGAGGGGAAAGAGCAAGCTGACAGAGAAATTACTAGTGAGATGGAGGCTTTGGCTGCTGCTTACCATGTCTTCAGAAATGTTGCTCAGCCCTTCTTCAATTACATAGAGGAAGAGGACTTGCTTAGGTTTATGATTAAGGAAGAGGTTGATCTTGTGTTCCCATTGTTTGATGGTGCCGCTGAGACCGGGAGAATTACAAGAAAAGCTTTCACAGAATGGGTGGTTAAGGTGTACACGAGCCGGAGAGCTTTAGCGCATTCCTTAAACGACACAAAAACAGCGGTTAAGCAGTTAAACAAACTTGTGACAGCAATCTTGATGGTGGTTACCGTTGTCATTTGGCTGCTCCTTCTAGAAGTAGCAACGACTAAGGTTTTGCTGTTCTTCTCCACCCAACTCGTGGCTCTGGCTTTTATAATCGGAAGCACATGCAAAAACCTCTTTGAATCCATTGTGTTCGTATTCGTCATGCATCCTTATGATGTCGGTGATCGATGTGTTGTTGACGGTGTCGCGATGCTGGTGGAAGAAATGAATCTCTTAACGACAGTGTTCTTGAAGCTTAACAACGAGAAAGTGTATTATCCGAACGCTGTTTTGGCCACGAAACCGATAAGCAATTACTTCAGAAGTCCGAATATGGGAGAAACAGTGGAATTCTCTATCTCTTTCTCGACACCAGTCTCTAAGATAGCACATCTCAAAGAAAGAATCGCCGAGTACTTGGAGCAGAACCCGCAACATTGGGCACCGGTTCACTCGGTGGTGGTGAAGGAGATAGAGAACATGAACAAGCTGAAGATGGCCCTATACAGTGACCACACCATCACGTTTCAGGAAAACAGAGAGAGGAATCTTAGAAGAACCGAACTTTCTTTGGCCATTAAGAGAATGTTGGAGGACCTTCACATCGACTACACTCTCCTTCCTCAAGACATTAATCTCACAAAGAAGAACTGATGAGAACCAATTTAAAACCGGTTTGGTGTTTTTTCTAAACCGTTGTTATAAGACATTATTATTACCAAACGTTGTGATACTGTTTTGTTTAAGGCTTTTAGAGTAGATGATGAAATCAATTTTCTAAACCGACTCAACTTTTATGGATTTTACAAAATTAGGCATTTTATGGATAAAAATCTTAGTCTTTGAAAATCTGAATAAAATGCAAGATCTGTCAAAAATGATTTGTCATGTATTGATTGTACAAAAGTTTTGTTACAAAATAAGAAGAAAAGTCTTATGTGAG
  • >AT5G12080.1
    CAATTACATTTCCCAATTAATTTTTGTGGCTTATAAAGTCTTGACATCTCTTTGCTCTTTGGACCCGCCTTAATGTTTTTTTGTTCATGTCTTCTTCTTCTTCTTCAAGAATGAGCTAATACTCACAGAAGAAGAAGATTTTTCTTTGGATTTTTCACTACTGAGGCATTGTTGTGAAATTGGATGGTAGTAGCATTGGAATGGCAGAACAAAAGAGTAGTAACGGAGGAGGAGGAGGAGGAGATGTTGTTATCAATGTTCCAGTTGAGGAAGCATCAAGGCGTTCCAAGGAAATGGCTTCACCAGAGTCTGAGAAAGGAGTTCCCTTTAGTAAAAGCCCTTCTCCTGAAATCTCTAAGCTTGTTGGTAGTCCTAACAAGCCTCCTAGAGCTCCAAATCAGAACAATGTGGGTCTAACTCAGAGGAAATCTTTTGCAAGGTCGGTTTACTCAAAACCCAAGTCCCGGTTTGTTGATCCATCTTGTCCTGTAGACACAAGTATTCTAGAGGAGGAAGTTAGGGAGCAACTTGGTGCTGGTTTTTCTTTTAGTAGAGCTTCTCCGAATAACAAATCTAATAGGAGTGTCGGGTCACCAGCACCGGTTACTCCAAGTAAAGTCGTTGTTGAGAAAGATGAGGATGAGGAAATCTACAAGAAGGTTAAGCTGAACAGAGAGATGCGCAGTAAGATAAGTACATTGGCTTTGATAGAGTCAGCTTTCTTTGTGGTGATTTTGAGCGCTTTGGTTGCGAGTTTAACCATTAATGTCCTGAAACATCACACCTTCTGGGGGCTAGAAGTCTGGAAATGGTGTGTGCTTGTGATGGTTATATTCAGTGGAATGTTGGTGACAAACTGGTTCATGCGTTTGATTGTGTTCCTCATAGAAACAAACTTTCTTTTGAGGAGAAAAGTGCTCTACTTTGTGCACGGCTTGAAGAAGAGCGTCCAAGTTTTCATTTGGCTCTGCTTGATTCTTGTTGCTTGGATATTGTTGTTCAACCACGACGTGAAACGGTCCCCCGCAGCCACCAAAGTCCTCAAATGTATTACCAGGACTCTTATTTCCATTCTTACAGGGGCATTCTTTTGGCTGGTGAAAACACTCTTGTTGAAAATCCTTGCAGCGAATTTCAACGTCAATAACTTTTTCGATAGGATTCAAGATTCTGTTTTCCACCAGTATGTTCTACAAACGCTCTCGGGTCTTCCACTTATGGAAGAGGCAGAGAGGGTCGGGCGTGAGCCAAGCACAGGCCATTTGAGTTTCGCGACTGTAGTGAAAAAAGGAACGGTTAAAGAGAAGAAAGTGATTGATATGGGGAAAGTTCATAAGATGAAGCGGGAGAAAGTTTCGGCTTGGACTATGCGAGTTTTGATGGAAGCGGTTAGAACTTCAGGTCTCTCTACTATCTCTGACACATTGGACGAAACAGCATACGGCGAGGGGAAAGAGCAAGCTGACAGAGAAATTACTAGTGAGATGGAGGCTTTGGCTGCTGCTTACCATGTCTTCAGAAATGTTGCTCAGCCCTTCTTCAATTACATAGAGGAAGAGGACTTGCTTAGGTTTATGATTAAGGAAGAGGTTGATCTTGTGTTCCCATTGTTTGATGGTGCCGCTGAGACCGGGAGAATTACAAGAAAAGCTTTCACAGAATGGGTGGTTAAGGTGTACACGAGCCGGAGAGCTTTAGCGCATTCCTTAAACGACACAAAAACAGCGGTTAAGCAGTTAAACAAACTTGTGACAGCAATCTTGATGGTGGTTACCGTTGTCATTTGGCTGCTCCTTCTAGAAGTAGCAACGACTAAGGTTTTGCTGTTCTTCTCCACCCAACTCGTGGCTCTGGCTTTTATAATCGGAAGCACATGCAAAAACCTCTTTGAATCCATTGTGTTCGTATTCGTCATGCATCCTTATGATGTCGGTGATCGATGTGTTGTTGACGGTGTCGCGATGCTGGTGGAAGAAATGAATCTCTTAACGACAGTGTTCTTGAAGCTTAACAACGAGAAAGTGTATTATCCGAACGCTGTTTTGGCCACGAAACCGATAAGCAATTACTTCAGAAGTCCGAATATGGGAGAAACAGTGGAATTCTCTATCTCTTTCTCGACACCAGTCTCTAAGATAGCACATCTCAAAGAAAGAATCGCCGAGTACTTGGAGCAGAACCCGCAACATTGGGCACCGGTTCACTCGGTGGTGGTGAAGGAGATAGAGAACATGAACAAGCTGAAGATGGCCCTATACAGTGACCACACCATCACGTTTCAGGAAAACAGAGAGAGGAATCTTAGAAGAACCGAACTTTCTTTGGCCATTAAGAGAATGTTGGAGGACCTTCACATCGACTACACTCTCCTTCCTCAAGACATTAATCTCACAAAGAAGAACTGATGAGAACCAATTTAAAACCGGTTTGGTGTTTTTTCTAAACCGTTGTTATAAGACATTATTATTACCAAACGTTGTGATACTGTTTTGTTTAAGGCTTTTAGAGTAGATGATGAAATCAATTTTCTAAACCGACTCAACTTTTATGGATTTTACAAAATTAGGCATTTTATGGATAAAAATCTTAGTCTTTGAAAATCTGAATAAAATGCAAGATCTGTCAAAAATGATTTGTCATGTATTGATTGTACAAAAGTTTTGTTACAAAATAAGAAGAAAAGTCTTATGTGAG
CDS Sequence
Protein Sequence