Information report for AT5G11980
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0009860 — acts upstream of or within — pollen tube growth
- GO:0007030 — acts upstream of or within — Golgi organization
- GO:0048193 — acts upstream of or within — Golgi vesicle transport
- GO:0017119 — part of — Golgi transport complex
- GO:0042803 — enables — protein homodimerization activity
- GO:0005515 — enables — protein binding
- GO:0009506 — located in — plasmodesma
- GO:0006891 — involved in — intra-Golgi vesicle-mediated transport
- GO:0005794 — located in — Golgi apparatus
- SALK_122096 — Defective pollen tubes , male sterile. Abnormal pollen tube golgi.
Functional Keywords
Literature and News
- MicroRNAs in plants. DOI: 10.1101/gad.1004402 ; PMID: 12101121
- Holding it all together? Candidate proteins for the plant Golgi matrix. DOI: 10.1016/j.pbi.2005.09.014 ; PMID: 16194619
- Arabidopsis COG Complex Subunits COG3 and COG8 Modulate Golgi Morphology, Vesicle Trafficking Homeostasis and Are Essential for Pollen Tube Growth. DOI: 10.1371/journal.pgen.1006140 ; PMID: 27448097
- Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase. DOI: 10.1038/s41477-019-0378-z ; PMID: 30833711
Gene Resources
- UniProt: A0A178UDM9
- EMBL: CACRSJ010000110, CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UDM9
- EnsemblPlants: AT5G11980.1
- Gramene: AT5G11980.1
- KEGG: ath:AT5G11980
- ExpressionAtlas: AT5G11980
- InterPro: IPR007255, IPR016159, IPR016632
- PANTHER: PTHR21311, PTHR21311:SF0
- SUPFAM: SSF74788
- OrthoDB: A0A178UDM9
- SWISS-MODEL: A0A178UDM9
Sequences
cDNA Sequence
- >AT5G11980.1
ATAAAATTGAAAGAGAAATTTCAGATCCAAAGCAGGAAAACAAATCACAGAAACATTTTGATGTTAAGTTTTTGAAAAAATCGCGAGTTTCTGGATCTGTATACTTTCTTAGAGGAGATTTTGATAGCATCGTTTACAGGAGTAAGATCCGGGAATGGCAATGGAGGTTGGGGAGATGTCTCAGCCGGAGGCGACGGCGAGTCTTCTCTCTCTCGCTTCCGCCACTCAGCAACCGTACGTCTCCGAGCTCCTCTCTTTCACTCTTGATCGTCTCCACAAGGAACCGGAGCTGCTTCGAGTGGATGCGGAGCGGATTCAGAGGCAAATGCAAGAGGTGGCTGTTGGAAATTACCGCGCGTTTATCACCGCTGCTGATGCTTTGCTTGCGATCCGTCAGGAAGTTTCTTCCATTGATAAGCATCTCGAGTCTCTGATTGGCGAAGTCCCAAAACTAACGTCTGGTTGCACTGAATTTATCGATTCTGCTGAGAATATTTTGGAGAAGAGGAAGATGAACCAAGCATTGCTGGCAAATCACAGCACTCTTCTTGACTTGCTTGAGATTCCTCAGCTTATGGACACATGCGTGAGGAATGGAAATTTTGATGAGGCTCTTGACCTGGAAGCATTTGTATCGAAACTTGCTACCCTGCATCCCAAATTGCCAGTTATCCAAGCACTTGCAGCGGAGGTTAGACAAACAACTCAGTCACTTCTCTCACAGCTTCTCCAGAAACTACGCTCAAATATACAGTTACCAGAATGTCTCCGCATTATTGGATACTTACGCCGAATAGGTGTCTTTGGCGAGTATGAAATGCGATTACAGTTCTTAAGATGCCGAGAGGCATGGCTCACTGGAATTCTTGAGGATTTAGATCAGAAAAATGCCTATGAGTATTTAAAAGGCATGATAAACTGTCACAGAATGCACCTATTTGACGTGGTTAACCAATATCGAGCTATATTTTCTGATGATACATCTGGGAGCGAAGAAAATTATGATGGTGGACTTTTGTTTAGCTGGGCCATGCATCAAATAACATCACACCTGAAGACTCTAAAAATCATGCTTCCAAAGATTACTGAAGGAGGATCTCTATCAAATATTTTGGATCAGTGCATGTACTGTGCGATGGGGCTTGGTGGGGTTGGGCTAGACTTCCGGGGTCTGCTTCCTCCACTTTTTGAAGAGGCGGTTCTAAACTTATTCTCCAAGAACATGAGTACAGCAGTTGAGAATTTTCAGTTAGTTTTGGATTCACATCGATGGGTTCCATTACCATCTGTTGGCTTTCCTTCAAGTGGTATTAATGAAGATAGCAAGGATGACGTCACACCTCCATCATACTTGATGGAGCACCCGCCACTTGCAGTTTTCATAAATGGGGTATCTTCTGCTTTGAACGAATTACGTCCTTGTGCCCCGCTAAGTCTAAAGAATGTTGTTGCTCATGAACTGATCAAAGGACTCCAGGCCGTGTCTGACTCCTTACTAAGATACAATACAACTCGGATGCTTCGACTCAGTGAATCCAATCTATTCCTTTCACTTTGCCGAGCTTTTGTCGAGGTGGTTTTTCCACATTGCGCCACATGCTTTGGCCGATGTTATCCAGGTGGTGCCACAATCGTTATGGATGCCAAGAGTGCATACGAAGGTCTGGGTCGCATCTTAGCTGCATCGTCCTCTCAAGAACCATCCAACAAATCTCCAAAGGTCATCAGCACGGACACAAAGGATGCATCAGAGAATGGTGTAGCCTCCCAACCTGAAGAAAAACAAGCCGAGAATCCAAACGCGAAAGAAGAAGATAACAGTCCCATTCCTTTGCAGACTCCTGAGATAACACCCGAGTCTTGAGAAATTTTTCATAAATTTGTCTTTTGTTGTAAGAATTATATGCTAATACACACATAGAGAGAGAGAGACAACAAAAGCTTTAAAATTAAGTGAAGAGTATCAATGCATTATGGTATAAATTTGATGGGATTATGTCGAATTGAGACTGCATCCAATT - >AT5G11980.2
ATAAAATTGAAAGAGAAATTTCAGATCCAAAGCAGGAAAACAAATCACAGAAACATTTTGATGTTAAGTTTTTGAAAAAATCGCGAGTTTCTGGATCTGTATACTTTCTTAGAGGAGATTTTGATAGCATCGTTTACAGGAGTAAGATCCGGGAATGGCAATGGAGGTTGGGGAGATGTCTCAGCCGGAGGCGACGGCGAGTCTTCTCTCTCTCGCTTCCGCCACTCAGCAACCGTACGTCTCCGAGCTCCTCTCTTTCACTCTTGATCGTCTCCACAAGGAACCGGAGCTGCTTCGAGTGGATGCGGAGCGGATTCAGAGGCAAATGCAAGAGGTGGCTGTTGGAAATTACCGCGCGTTTATCACCGCTGCTGATGCTTTGCTTGCGATCCGTCAGGAAGTTTCTTCCATTGATAAGCATCTCGAGTCTCTGATTGGCGAAGTCCCAAAACTAACGTCTGGTTGCACTGAATTTATCGATTCTGCTGAGAATATTTTGGAGAAGAGGAAGATGAACCAAGCATTGCTGGCAAATCACAGCACTCTTCTTGACTTGCTTGAGATTCCTCAGCTTATGGACACATGCGTGAGGAATGGAAATTTTGATGAGGCTCTTGACCTGGAAGCATTTGTATCGAAACTTGCTACCCTGCATCCCAAATTGCCAGTTATCCAAGCACTTGCAGCGGAGGTTAGACAAACAACTCAGTCACTTCTCTCACAGCTTCTCCAGAAACTACGCTCAAATATACAGTTACCAGAATGTCTCCGCATTATTGGATACTTACGCCGAATAGGTGTCTTTGGCGAGTATGAAATGCGATTACAGTTCTTAAGATGCCGAGAGGCATGGCTCACTGGAATTCTTGAGGATTTAGATCAGAAAAATGCCTATGAGTATTTAAAAGGCATGATAAACTGTCACAGAATGCACCTATTTGACGTGGTTAACCAATATCGAGCTATATTTTCTGATGATACATCTGGGAGCGAAGAAAATTATGATGGTGGACTTTTGTTTAGCTGGGCCATGCATCAAATAACATCACACCTGAAGACTCTAAAAATCATGCTTCCAAAGATTACTGAAGGAGGATCTCTATCAAATATTTTGGATCAGTGCATGTACTGTGCGATGGGGCTTGGTGGGGTTGGGCTAGACTTCCGGGGTCTGCTTCCTCCACTTTTTGAAGAGGCGGTTCTAAACTTATTCTCCAAGAACATGAGTACAGCAGTTGAGAATTTTCAGTTAGTTTTGGATTCACATCGATGGGTTCCATTACCATCTGTTGGCTTTCCTTCAAGTGGTATTAATGAAGATAGCAAGGATGACGTCACACCTCCATCATACTTGATGGAGCACCCGCCACTTGCAGTTTTCATAAATGGGGTATCTTCTGCTTTGAACGAATTACGTCCTTGTGCCCCGCTAAGTCTAAAGAATGTTGTTGCTCATGAACTGATCAAAGGACTCCAGGCCGTGTCTGACTCCTTACTAAGATACAATACAACTCGGATGCTTCGACTCAGTGAATCCAATCTATTCCTTTCACTTTGCCGAGCTTTTGTCGAGGTGGTTTTTCCACATTGCGCCACATGCTTTGGCCGATGTTATCCAGGTGGTGCCACAATCGTTATGGATGCCAAGAGTGCATACGAAGGTCTGGGTCGCATCTTAGCTGCATCGTCCTCTCAAGAACCATCCAACAAATCTCCAAAGGTCATCAGCACGGACACAAAGGATGCATCAGAGAATGGTGTAGCCTCCCAACCTGAAGAAAAACAAGCCGAGAATCCAAACGCGAAAGAAGAAGATAACAGTCCCATTCCTTTGCAGACTCCTGAGATAACACCCGAGTCTTGAGAAATTTTTCATAAATTTGTCTTTTGTTGTAAGAATTATATGCTAATACACACATAGAGAGAGAGAGACAACAAAAGCTTTAAAATTAAGTGAAGAGTATCAATGCATTATGGTATAAATTTGATGGGATTATGTCGAATTGAGACTGCATCCAATT
CDS Sequence
Protein Sequence