Information report for AT5G11950
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0005829 — is active in — cytosol
- GO:0009691 — involved in — cytokinin biosynthetic process
- GO:0005634 — located in — nucleus
- GO:0005886 — located in — plasma membrane
- GO:0009691 — enables — cytokinin biosynthetic process
- GO:0016799 — enables — hydrolase activity, hydrolyzing N-glycosyl compounds
- GO:0005737 — located in — cytoplasm
- GO:0005829 — located in — cytosol
Functional Keywords
Literature and News
- X-ray crystal structures of the conserved hypothetical proteins from Arabidopsis thaliana gene loci At5g11950 and AT2g37210. DOI: 10.1002/prot.21166 ; PMID: 17048257
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Functional analyses of LONELY GUY cytokinin-activating enzymes reveal the importance of the direct activation pathway in Arabidopsis. DOI: 10.1105/tpc.109.068676 ; PMID: 19837870
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Species specific amino acid sequence-protein local structure relationships: An analysis in the light of a structural alphabet. DOI: 10.1016/j.jtbi.2011.01.047 ; PMID: 21333657
- Arabidopsis lonely guy (LOG) multiple mutants reveal a central role of the LOG-dependent pathway in cytokinin activation. DOI: 10.1111/j.1365-313X.2011.04795.x ; PMID: 22059596
- Identification of a protein-protein interaction network downstream of molybdenum cofactor biosynthesis in Arabidopsis thaliana. DOI: 10.1016/j.jplph.2016.10.002 ; PMID: 27792900
- X-ray crystal structures of the conserved hypothetical proteins from Arabidopsis thaliana gene loci At5g11950 and AT2g37210. DOI: 10.1002/prot.21166 ; PMID: 17048257
- X-ray crystal structures of the conserved hypothetical proteins from Arabidopsis thaliana gene loci At5g11950 and AT2g37210. DOI: 10.1002/prot.21166 ; PMID: 17048257
Gene Resources
- UniProt: A0A178UJ28
- EMBL: CACRSJ010000110, LUHQ01000005
- AlphaFoldDB: A0A178UJ28
- EnsemblPlants: AT5G11950.1, AT5G11950.2, AT5G11950.3
- Gramene: AT5G11950.1, AT5G11950.2, AT5G11950.3
- KEGG: ath:AT5G11950
- Orthologous matrix: HQKPIGL
- ExpressionAtlas: AT5G11950
- InterPro: IPR005269, IPR031100
- PANTHER: PTHR31223, PTHR31223:SF11
- SUPFAM: SSF102405
- Gene3D: 3.40.50.450
- SWISS-MODEL: A0A178UJ28
Sequences
cDNA Sequence
- >AT5G11950.3
GTGGGAGGCTCATGTGGGCTTCCTCTGTTCGCCATATAACTAATTTCGATTTTAGTGTATACGTATGCAATTTTTTGTCACCTATGGCCGTTGTCCCTGGATGATGACCATGGCCTACAAGATAAACAAAGAAAAAAAAAGATCTGCAGTGAATAATAAAAGATTCAAAGTGTTCAGATTTTTATCCATTAATGGAAGATAATCAGCGAAGCAGATTCAGAAAAATCTGTGTCTTTTGCGGAAGCCACTCTGGTCACAGAGAAGTTTTCAGTGATGCTGCCATCGAACTCGGCAATGAACTCGTGAAGAGGAAGATAGATTTGGTTTATGGAGGAGGAAGTGTTGGATTGATGGGTTTGATATCCAGGAGAGTCTATGAAGGTGGTTTACATGTACTTGGAATCATTCCCAAAGCTTTGATGCCAATTGAGATATCTGGTGAGACTGTGGGAGATGTAAGAGTTGTTGCAGACATGCATGAGCGAAAGGCTGCAATGGCACAGGAAGCTGAGGCCTTCATTGCACTCCCTGGAGGTTATGGAACAATGGAGGAGCTGTTGGAGATGATAACATGGTCACAACTTGGTATCCATAAGAAGACGGTTGGTCTATTGAATGTTGATGGGTACTATAACAATTTGCTTGCTTTATTTGATACCGGTGTCGAAGAAGGTTTTATCAAGCCAGGTGCACGTAACATTGTGGTTTCTGCTCCAACAGCCAAAGAGCTTATGGAGAAGATGGAGGAATATACTCCTTCACACATGCATGTTGCATCGCACGAAAGCTGGAAAGTTGAAGAACTCGGAGATTACCCGGGACAAGAAAACAAGCCGCAATAAAAGCAATTATTATTGTTTAGCATAAGCTATTTCCATTTCAAGTTTAGTCTCTAAATTATTTGCAGAATCCACAATGTGTATAAGAAAACTCAAATCTTGTTGCAATATGAAACAGCACATTGGGTCCCCAACATGAAAATGTTGCTGATTATGTTAGTTAAGTTTGGTATTTTGGGTAAAGAACC - >AT5G11950.2
GTGGGAGGCTCATGTGGGCTTCCTCTGTTCGCCATATAACTAATTTCGATTTTAGTGTATACGTATGCAATTTTTTGTCACCTATGGCCGTTGTCCCTGGATGATGACCATGGCCTACAAGATAAACAAAGAAAAAAAAAGATCTGCAGTGAATAATAAAAGATTCAAAGTGTTCAGATTTTTATCCATTAATGGAAGATAATCAGCGAAGCAGATTCAGAAAAATCTGTGTCTTTTGCGGAAGCCACTCTGGTCACAGAGAAGTTTTCAGTGATGCTGCCATCGAACTCGGCAATGAACTCGTGAAGAGGAAGATAGATTTGGTTTATGGAGGAGGAAGTGTTGGATTGATGGGTTTGATATCCAGGAGAGTCTATGAAGGTGGTTTACATGTACTTGGAATCATTCCCAAAGCTTTGATGCCAATTGAGATATCTGGTGAGACTGTGGGAGATGTAAGAGTTGTTGCAGACATGCATGAGCGAAAGGCTGCAATGGCACAGGAAGCTGAGGCCTTCATTGCACTCCCTGGAGGTTATGGAACAATGGAGGAGCTGTTGGAGATGATAACATGGTCACAACTTGGTATCCATAAGAAGACGGTTGGTCTATTGAATGTTGATGGGTACTATAACAATTTGCTTGCTTTATTTGATACCGGTGTCGAAGAAGGTTTTATCAAGCCAGGTGCACGTAACATTGTGGTTTCTGCTCCAACAGCCAAAGAGCTTATGGAGAAGATGGAGGAATATACTCCTTCACACATGCATGTTGCATCGCACGAAAGCTGGAAAGTTGAAGAACTCGGAGATTACCCGGGACAAGAAAACAAGCCGCAATAAAAGCAATTATTATTGTTTAGCATAAGCTATTTCCATTTCAAGTTTAGTCTCTAAATTATTTGCAGAATCCACAATGTGTATAAGAAAACTCAAATCTTGTTGCAATATGAAACAGCACATTGGGTCCCCAACATGAAAATGTTGCTGATTATGTTAGTTAAGTTTGGTATTTTGGGTAAAGAACC - >AT5G11950.1
GTGGGAGGCTCATGTGGGCTTCCTCTGTTCGCCATATAACTAATTTCGATTTTAGTGTATACGTATGCAATTTTTTGTCACCTATGGCCGTTGTCCCTGGATGATGACCATGGCCTACAAGATAAACAAAGAAAAAAAAAGATCTGCAGTGAATAATAAAAGATTCAAAGTGTTCAGATTTTTATCCATTAATGGAAGATAATCAGCGAAGCAGATTCAGAAAAATCTGTGTCTTTTGCGGAAGCCACTCTGGTCACAGAGAAGTTTTCAGTGATGCTGCCATCGAACTCGGCAATGAACTCGTGAAGAGGAAGATAGATTTGGTTTATGGAGGAGGAAGTGTTGGATTGATGGGTTTGATATCCAGGAGAGTCTATGAAGGTGGTTTACATGTACTTGGAATCATTCCCAAAGCTTTGATGCCAATTGAGATATCTGGTGAGACTGTGGGAGATGTAAGAGTTGTTGCAGACATGCATGAGCGAAAGGCTGCAATGGCACAGGAAGCTGAGGCCTTCATTGCACTCCCTGGAGGTTATGGAACAATGGAGGAGCTGTTGGAGATGATAACATGGTCACAACTTGGTATCCATAAGAAGACGGTTGGTCTATTGAATGTTGATGGGTACTATAACAATTTGCTTGCTTTATTTGATACCGGTGTCGAAGAAGGTTTTATCAAGCCAGGTGCACGTAACATTGTGGTTTCTGCTCCAACAGCCAAAGAGCTTATGGAGAAGATGGAGGAATATACTCCTTCACACATGCATGTTGCATCGCACGAAAGCTGGAAAGTTGAAGAACTCGGAGATTACCCGGGACAAGAAAACAAGCCGCAATAAAAGCAATTATTATTGTTTAGCATAAGCTATTTCCATTTCAAGTTTAGTCTCTAAATTATTTGCAGAATCCACAATGTGTATAAGAAAACTCAAATCTTGTTGCAATATGAAACAGCACATTGGGTCCCCAACATGAAAATGTTGCTGATTATGTTAGTTAAGTTTGGTATTTTGGGTAAAGAACC - >AT5G11950.4
GTGGGAGGCTCATGTGGGCTTCCTCTGTTCGCCATATAACTAATTTCGATTTTAGTGTATACGTATGCAATTTTTTGTCACCTATGGCCGTTGTCCCTGGATGATGACCATGGCCTACAAGATAAACAAAGAAAAAAAAAGATCTGCAGTGAATAATAAAAGATTCAAAGTGTTCAGATTTTTATCCATTAATGGAAGATAATCAGCGAAGCAGATTCAGAAAAATCTGTGTCTTTTGCGGAAGCCACTCTGGTCACAGAGAAGTTTTCAGTGATGCTGCCATCGAACTCGGCAATGAACTCGTGAAGAGGAAGATAGATTTGGTTTATGGAGGAGGAAGTGTTGGATTGATGGGTTTGATATCCAGGAGAGTCTATGAAGGTGGTTTACATGTACTTGGAATCATTCCCAAAGCTTTGATGCCAATTGAGATATCTGGTGAGACTGTGGGAGATGTAAGAGTTGTTGCAGACATGCATGAGCGAAAGGCTGCAATGGCACAGGAAGCTGAGGCCTTCATTGCACTCCCTGGAGGTTATGGAACAATGGAGGAGCTGTTGGAGATGATAACATGGTCACAACTTGGTATCCATAAGAAGACGGTTGGTCTATTGAATGTTGATGGGTACTATAACAATTTGCTTGCTTTATTTGATACCGGTGTCGAAGAAGGTTTTATCAAGCCAGGTGCACGTAACATTGTGGTTTCTGCTCCAACAGCCAAAGAGCTTATGGAGAAGATGGAGGAATATACTCCTTCACACATGCATGTTGCATCGCACGAAAGCTGGAAAGTTGAAGAACTCGGAGATTACCCGGGACAAGAAAACAAGCCGCAATAAAAGCAATTATTATTGTTTAGCATAAGCTATTTCCATTTCAAGTTTAGTCTCTAAATTATTTGCAGAATCCACAATGTGTATAAGAAAACTCAAATCTTGTTGCAATATGAAACAGCACATTGGGTCCCCAACATGAAAATGTTGCTGATTATGTTAGTTAAGTTTGGTATTTTGGGTAAAGAACC
CDS Sequence
Protein Sequence