Information report for AT5G11720
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Functional Keywords
Literature and News
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- Diurnal changes in the transcriptome encoding enzymes of starch metabolism provide evidence for both transcriptional and posttranscriptional regulation of starch metabolism in Arabidopsis leaves. DOI: 10.1104/pp.104.044347 ; PMID: 15347792
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- An in vivo expression system for the identification of cargo proteins of vacuolar sorting receptors in Arabidopsis culture cells. DOI: 10.1111/tpj.12257 ; PMID: 23738689
- Multiplex Fluorescent, Activity-Based Protein Profiling Identifies Active α-Glycosidases and Other Hydrolases in Plants. DOI: 10.1104/pp.18.00250 ; PMID: 29555787
- Isolation of intact vacuoles and proteomic analysis of tonoplast from suspension-cultured cells of Arabidopsis thaliana. DOI: 10.1093/pcp/pch099 ; PMID: 15215502
- The vegetative vacuole proteome of Arabidopsis thaliana reveals predicted and unexpected proteins. DOI: 10.1105/tpc.104.027078 ; PMID: 15539469
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
- Identification by 2-D DIGE of apoplastic proteins regulated by oligogalacturonides in Arabidopsis thaliana. DOI: 10.1002/pmic.200700523 ; PMID: 18324730
- Hydroponic isotope labelling of entire plants (HILEP) for quantitative plant proteomics; an oxidative stress case study. DOI: 10.1016/j.phytochem.2008.04.007 ; PMID: 18538804
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: Q9LYF8
- EMBL: AL163814, AY053414, BT002222
- AlphaFoldDB: Q9LYF8
- EnsemblPlants: AT5G11720.1
- Gramene: AT5G11720.1
- KEGG: ath:AT5G11720
- Orthologous matrix: YKGAVWP
- ExpressionAtlas: AT5G11720
- InterPro: IPR000322, IPR011013, IPR013780
- PANTHER: PTHR22762, PTHR22762:SF133
- SUPFAM: SSF51011, SSF51445, SSF74650
- PROSITE: PS00129, PS00707
- Gene3D: 2.60.40.1180, 2.60.40.1760, 3.20.20.80
- OrthoDB: Q9LYF8
- SWISS-MODEL: Q9LYF8
- Conserved Domain Database: cd06602, cd14752
Sequences
cDNA Sequence
- >AT5G11720.1
TCTTATCTTACACAATTTAGTTCTCCGGTCACGAATGATTAAAATATAGAATAGTCTTATCTACAAAGAAAATGAGTAGTTGTGACAAAAAAAAATAGTCCAACACCAAAATAAAAAATGTCATCTCTTCACTGGTTTCCCAATATCTTCATCGTTGTCGTCGTCTTCTTCTCCTTGAGAAGTTCACAAGTTGTACTAGAAGAAGAAGAATCCACAGTCGTTGGATACGGCTACGTCGTTAGATCAGTGGGCGTTGATTCTAACCGGCAAGTTTTGACGGCGAAGCTTGATCTGATAAAACCATCGTCCGTTTACGCACCAGATATTAAATCGCTTAATCTTCATGTCAGCTTGGAGACAAGTGAGCGTTTGAGAATCAGAATCACAGACTCTAGTCAACAAAGATGGGAGATACCGGAAACCGTTATTCCTCGTGCCGGAAACCACTCTCCTCGCCGTTTCTCAACGGAGGAAGACGGAGGAAACTCTCCGGAGAACAATTTCTTAGCAGATCCCTCATCGGACTTGGTTTTCACTCTCCACAACACGACGCCGTTTGGTTTCTCCGTCTCCCGACGTTCCTCCGGCGATATCCTCTTCGACACATCGCCGGATTCATCAGATTCAAACACTTACTTCATCTTCAAAGACCAATTCCTTCAACTATCATCCGCGTTACCGGAAAACAGATCGAATCTGTACGGAATCGGAGAGCACACGAAGCGATCGTTCAGGCTAATTCCCGGTGAGACCATGACTTTGTGGAACGCCGACATCGGCAGCGAAAATCCGGATGTCAACCTTTACGGATCGCACCCGTTTTACATGGATGTAAGAGGATCAAAGGGAAACGAGGAAGCAGGGACGACTCATGGGGTTCTCTTGCTGAACAGCAATGGAATGGATGTGAAGTATGAAGGACATCGGATAACTTACAATGTGATTGGAGGCGTCATTGATCTCTATGTGTTCGCGGGACCATCGCCGGAGATGGTCATGAATCAGTACACTGAGCTTATTGGAAGACCTGCCCCTATGCCTTACTGGTCATTTGGATTTCACCAATGTAGATATGGGTACAAGAATGTATCAGACCTTGAATATGTAGTTGATGGATATGCAAAAGCTGGAATACCTCTTGAGGTGATGTGGACTGACATTGATTACATGGATGGGTACAAAGACTTCACTTTGGATCCTGTAAATTTCCCGGAGGACAAGATGCAATCATTTGTCGATACACTTCACAAGAATGGTCAGAAATACGTGCTGATCTTGGATCCCGGTATTGGTGTGGATAGCTCTTATGGGACATATAATAGAGGAATGGAAGCTGATGTTTTCATAAAAAGAAATGGTGAGCCTTATCTTGGTGAGGTTTGGCCCGGAAAAGTATACTTCCCCGACTTCTTGAATCCAGCTGCTGCAACTTTCTGGAGCAACGAAATCAAGATGTTCCAGGAGATTCTCCCTTTGGATGGTCTGTGGATTGACATGAATGAGTTATCAAATTTCATAACTTCGCCTCTATCCTCTGGATCTTCACTCGATGATCCTCCTTACAAGATCAACAATTCAGGGGATAAAAGGCCGATAAACAATAAGACAGTACCCGCAACATCTATCCATTTTGGAAACATTAGTGAATACGATGCGCATAACTTGTATGGGCTCTTGGAAGCTAAAGCCACTCACCAAGCTGTGGTGGATATAACGGGAAAGAGACCGTTTATTTTGTCAAGATCCACGTTTGTAAGCTCGGGGAAATACACGGCTCACTGGACTGGTGATAATGCTGCAAAATGGGAGGATTTGGCTTACTCAATCCCCGGAATCCTCAACTTTGGCCTGTTTGGGATTCCAATGGTTGGAGCTGATATTTGCGGTTTCTCACATGATACCACCGAGGAATTATGCCGTCGATGGATCCAGCTTGGAGCTTTTTACCCTTTTGCAAGAGACCATTCGTCCCTTGGTACCGCCAGACAAGAACTATACCTCTGGGATTCAGTTGCTTCTTCTGCAAGAAAGGTTCTCGGCCTCAGAATGAGACTGCTCCCACATCTCTACACATTGATGTATGAGGCTCATGTCAGCGGCAACCCAATCGCGCGCCCGCTCTTCTTCTCATTTCCTCAAGACACTAAAACCTATGAGATTGATTCCCAGTTCTTGATTGGTAAAAGCATAATGGTTTCTCCAGCGCTGAAGCAAGGGGCGGTAGCAGTGGATGCATATTTCCCTGCTGGAAATTGGTTCGATCTTTTTAACTATTCCTTTGCCGTTGGTGGAGATTCTGGCAAGCACGTTAGACTTGATACTCCCGCTGATCACGTCAACGTTCATGTTCGAGAAGGTAGCATTGTGGCTATGCAAGGAGAGGCATTGACGACTAGGGACGCCAGAAAGACACCGTATCAGCTTCTAGTTGTAGCCAGCCGGCTTGAGAACATCTCCGGCGAACTGTTTCTTGATGACGGAGAAAATTTACGGATGGGAGCTGGAGGAGGAAACCGTGATTGGACCCTTGTTAAGTTCCGGTGCTATGTGACCGGAAAATCCGTTGTACTGAGATCAGAAGTGGTGAACCCAGAGTATGCGTCGAAAATGAAATGGAGCATCGGGAAAGTGACGTTTGTTGGGTTCGAGAACGTGGAGAACGTGAAAACGTACGAGGTTAGGACAAGTGAGAGATTGAGGAGTCCTAGAATCTCTCTTATAAAGACGGTTTCGGACAATGATGATCCGAGGTTTCTAAGTGTGGAGGTTTCTAAACTGTCGTTACTTGTTGGGAAGAAGTTCGAAATGAGACTGAGATTGACTTGAAGAAGTATATAAAGTATAAAACAATATTGATGGGAAATTGTGGATGCTTAATGAATAAGGAGTGAAGAAGAACATTTAGTAAAGAAAAGATTTCATGATTTTTATAAACTCCAAATCACATAGATTTGATTTTTTTTTTTTCTATTTTTGAGAAACAAATGTGACACAATTAATACTAGTGGATTAAATTTCTAAATTATGGTCAAATCCTTTATCAATGTAATAAAATT
CDS Sequence
Protein Sequence