Information report for AT5G11470
Gene Details
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Functional Descriptions
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- CS404231 — Shoot growth reduced, narrow and serrated leaves, Severity of the phenotype became stronger in successive generations. Plants are completely sterile from 4th-5th generation.
- sg1-1 — Shoot growth reduced, narrow and serrated leaves, flowers with more petals, some being fused. Severity of the phenotype becomes stronger after 4 generations, e.g. small deformed leaves associated with strong sterility.
- sg1-2 — Shoot growth reduced, narrow and serrated leaves, flowers with more petals, some being fused. Severity of the phenotype became stronger in successive generations. Plants are completely sterile from 4th-5th generation.
Functional Keywords
Literature and News
- SHOOT GROWTH1 maintains Arabidopsis epigenomes by regulating IBM1. DOI: 10.1371/journal.pone.0084687 ; PMID: 24404182
- A protein complex regulates RNA processing of intronic heterochromatin-containing genes in Arabidopsis. DOI: 10.1073/pnas.1710683114 ; PMID: 28808009
- Antagonistic Actions of FPA and IBM2 Regulate Transcript Processing from Genes Containing Heterochromatin. DOI: 10.1104/pp.18.01106 ; PMID: 30814131
- Genome-wide distribution and functions of the AAE complex in epigenetic regulation in Arabidopsis. DOI: 10.1111/jipb.13068 ; PMID: 33438356
- Molecular basis of locus-specific H3K9 methylation catalyzed by SUVH6 in plants. DOI: 10.1073/pnas.2211155120 ; PMID: 36580600
Gene Resources
- UniProt: A0A654G081
- EMBL: CACRSJ010000110
- AlphaFoldDB: A0A654G081
- EnsemblPlants: AT5G11470.2
- Gramene: AT5G11470.2
- KEGG: ath:AT5G11470
- Orthologous matrix: KIWQQNQ
- ExpressionAtlas: AT5G11470
- InterPro: IPR000504, IPR001025, IPR012677
- PANTHER: PTHR47073, PTHR47073:SF2
- SUPFAM: SSF54928
- PROSITE: PS50102, PS51038
- Gene3D: 2.30.30.490, 3.30.70.330
- SWISS-MODEL: A0A654G081
- Conserved Domain Database: cd04715
Sequences
cDNA Sequence
- >AT5G11470.2
TAAAAAAGTAAGTAACAGAGAAAATCTCAGAGAAAGGGGGAATGGGAGGAGAAAAGCTTTCATGAACTTACCGTTCTCTCTGGAAACTGCAACAACAAGAACAATCTTCGACCAAAACTGAATTGCTCTATAGAGATTTTGATTTGAATTTGTTTATGATGAACTTTAGCGATAGATAAAGTGGAGAGATACTGTAGTAACCGGTAAAACGAGGGATTAGGGTTTTTTTTTCTCCCTCTGCGATAAACCTGGGCTTCGTCAATTTCTGTTCATCTTGACCTAATCGAACTCGCGTCACTCTGATTTCGCTAGGGTTCCATTTTTCCGTTCGGTGGCTTCGGAAACTGTAAACTGATTTCTTCAGTGAAGGTAGAAAATTGCTTTTAGAGAATGGAAGAATCTGTAGCATCTGAAGGCTTAGAATTTAAGTGGGGTAAAAAGAAAGGTGTTGGTGGGAAAAAGAAAGATGTCCAGTTCTATGAATCTTTCACCTATGATGGCGATGAATACCGTCTTTATGACTGTGTCTTAGTTGGCAATGCCAGTGAACCAGACTCTACTGAACCCTTCATTGGCATGATCATAAAAATTTGGGAACACGCTAATAAGCATATCCCAAAGAAAGTCAAGCTTCTCTGGTTCTTTAAACCTTCTGAGATTGCGCCATATCTTGAAGGAGTCCCGAATGTACTTGCCAATGAAGTGTTTTTAGCATCGGGTGAAGGTCTTGGCCTTGCTAATACCAACCAATTGGAAGCAATCGGTGGAAAATGCTCTGTTCTATGCATTTCAAAAGACAAAAGAAATCCACAACCCTCGGATGAAAAATTCAACTCAGCGGACTTCGTGTTTTGCCGAGCATTTGATGTTGGAAGTTGCAAAGTTGTGGATACGATTGATGATAAGATTGCTGGAGTTGACGTTAAATTTATCTTTAACAGAGCGTGCTCTGAGAAAGAAGCAACTGCGGTGCAGAATATTGAAGCAGACGTAAATGGGAAGTCAGATAGTTTGAAACCAAATGGTCCTTTAGCTAGGGGAGCTAGTGGTTCAGTTAGGAAAATCGAAGACAGCGCTTTTGAATCTTCTGACTGTAAAGAAAACAGTAATGGTTGCAAAGAAGAGAAAGAAAAAGGTCACTACCAACTCGCTATAAAAAAATCTACACTTGCAGAAGAAAGGTCTAACAAGGATTCTGGCTCTAGGGGAAATCATTATAATGGCAAAGATCAAGAAAGTGAAGTTAAAAAACAGTTAACTAAACAAAAATCTATGCCTGGCGAAGAAAGATATAGTAACTCTTTTGAAGCTTCTGGCTCCAGGACAATTCATTCCATTTCAAAGAAAGCTCAAGAAAATGATGTTAAAAAGCAGTTGACTAAACAAAAATCTATGCCCGCTGGAGAAAGATATAGTCAAGAGTCGAGTGGATTGGATGACAGGCCTCTGAAGAAACAGAAACTTGATGGTTCTGTTACAGTACGAGATGGATGGGATACAACCATTTTGCAGAACATTACTTCTGATGGTAAAAAGGATACAGGATCTTTTAAGAGACCTAGAGACAAAGTGACTATAGAGGAAGTCCCTCCCGAAAAGCGCAGCTTTGTTAAGAACCGAGATCTTGTAGTGTCAGTATCTGAAGGAAAAACTACAAAAACTGTAACTGAAAAAGGTATATCCAAGAAGCCCAGCTTTGGACGTGCTGAGGACAAGATGTCGGCAGATGATAATGAAAGAAACTATCAAGTAACTGAAGTGTGCCGAAGGCCGGATGCTGGAAAAAGTAAATGGTTCCGGAGTCTTCCTTGGGAAGAAAGTATGAGGGAAGCAGAAAAAAAAGGGACTGTGGTACTTCTTCAAAACTTGGATCCTACTTATACATCTGATGAAGTGGAGGATATAGTCTATTCTGCTTTGAACCAGCAATGCGAAGCGAGGATGATAGAGCGTACATCAGTCACTATTCCTCATATTGGTGAAGCTTTGGTCATTTTCAAAACAAGAGAAGTTGCAGAAAGGGTGATTAGAAGACTAGATGAGGGATGCTTGTTGCTATCAAGTGGGAGGCCCCTTGTTGCTTCTTTCGCTAAGATTACTCCACCAGGGAAGCCGTCATTATTCTCAGGCCATATCAAACTACACAAAACTCAAACGCGACGGGAGATGAGAGATGCCGTGGCTACATCACATTCTTCTCAGCCTAACAACCTTGAATTTGACATGGCCATGGAATGGTGTTTGCACCAAGCCAGACACGAGCAGGCGTCTGAAAGTGTATCTAAGCGGCAATTGGAGGAGATGAAGTCGCTGCGGATTAACTTCAAGCTGAAACTTCCTTAGTTTCAGAATCATCTTGTCACTCTCGTACAGAAATATCACCAACTGTAGATTAGAAGGAAAAACACAAGGTCTCTTTTAGCCTCTAAAGACAGTGAGACTCAAGAATTTTGGTTTCATGCCATCCAGTCCCCCAACTTTGACTCGGAGGAATATACTGATGCGGCTTCTGGTCTCAAATCGGACGACCCTTTTGTAGTTACATATTTTTTTGTAAGGGTCAGTTTCACTAGTGAAGTGCTAAACTTTTGTGTGGATCAGGAAAGGTCAAGAGAGTAATTGTGACCTTTTAGGGGTTTAAAAAAGTTCCTTATGATGCACCTTTTAGCCTAACTAGTTGTTTCACCACTTAAGCCCGTCTCTTGTCATCTGAAAAAGAGTTTCAACTCATTCCATATCCAC - >AT5G11470.1
TAAAAAAGTAAGTAACAGAGAAAATCTCAGAGAAAGGGGGAATGGGAGGAGAAAAGCTTTCATGAACTTACCGTTCTCTCTGGAAACTGCAACAACAAGAACAATCTTCGACCAAAACTGAATTGCTCTATAGAGATTTTGATTTGAATTTGTTTATGATGAACTTTAGCGATAGATAAAGTGGAGAGATACTGTAGTAACCGGTAAAACGAGGGATTAGGGTTTTTTTTTCTCCCTCTGCGATAAACCTGGGCTTCGTCAATTTCTGTTCATCTTGACCTAATCGAACTCGCGTCACTCTGATTTCGCTAGGGTTCCATTTTTCCGTTCGGTGGCTTCGGAAACTGTAAACTGATTTCTTCAGTGAAGGTAGAAAATTGCTTTTAGAGAATGGAAGAATCTGTAGCATCTGAAGGCTTAGAATTTAAGTGGGGTAAAAAGAAAGGTGTTGGTGGGAAAAAGAAAGATGTCCAGTTCTATGAATCTTTCACCTATGATGGCGATGAATACCGTCTTTATGACTGTGTCTTAGTTGGCAATGCCAGTGAACCAGACTCTACTGAACCCTTCATTGGCATGATCATAAAAATTTGGGAACACGCTAATAAGCATATCCCAAAGAAAGTCAAGCTTCTCTGGTTCTTTAAACCTTCTGAGATTGCGCCATATCTTGAAGGAGTCCCGAATGTACTTGCCAATGAAGTGTTTTTAGCATCGGGTGAAGGTCTTGGCCTTGCTAATACCAACCAATTGGAAGCAATCGGTGGAAAATGCTCTGTTCTATGCATTTCAAAAGACAAAAGAAATCCACAACCCTCGGATGAAAAATTCAACTCAGCGGACTTCGTGTTTTGCCGAGCATTTGATGTTGGAAGTTGCAAAGTTGTGGATACGATTGATGATAAGATTGCTGGAGTTGACGTTAAATTTATCTTTAACAGAGCGTGCTCTGAGAAAGAAGCAACTGCGGTGCAGAATATTGAAGCAGACGTAAATGGGAAGTCAGATAGTTTGAAACCAAATGGTCCTTTAGCTAGGGGAGCTAGTGGTTCAGTTAGGAAAATCGAAGACAGCGCTTTTGAATCTTCTGACTGTAAAGAAAACAGTAATGGTTGCAAAGAAGAGAAAGAAAAAGGTCACTACCAACTCGCTATAAAAAAATCTACACTTGCAGAAGAAAGGTCTAACAAGGATTCTGGCTCTAGGGGAAATCATTATAATGGCAAAGATCAAGAAAGTGAAGTTAAAAAACAGTTAACTAAACAAAAATCTATGCCTGGCGAAGAAAGATATAGTAACTCTTTTGAAGCTTCTGGCTCCAGGACAATTCATTCCATTTCAAAGAAAGCTCAAGAAAATGATGTTAAAAAGCAGTTGACTAAACAAAAATCTATGCCCGCTGGAGAAAGATATAGTCAAGAGTCGAGTGGATTGGATGACAGGCCTCTGAAGAAACAGAAACTTGATGGTTCTGTTACAGTACGAGATGGATGGGATACAACCATTTTGCAGAACATTACTTCTGATGGTAAAAAGGATACAGGATCTTTTAAGAGACCTAGAGACAAAGTGACTATAGAGGAAGTCCCTCCCGAAAAGCGCAGCTTTGTTAAGAACCGAGATCTTGTAGTGTCAGTATCTGAAGGAAAAACTACAAAAACTGTAACTGAAAAAGGTATATCCAAGAAGCCCAGCTTTGGACGTGCTGAGGACAAGATGTCGGCAGATGATAATGAAAGAAACTATCAAGTAACTGAAGTGTGCCGAAGGCCGGATGCTGGAAAAAGTAAATGGTTCCGGAGTCTTCCTTGGGAAGAAAGTATGAGGGAAGCAGAAAAAAAAGGGACTGTGGTACTTCTTCAAAACTTGGATCCTACTTATACATCTGATGAAGTGGAGGATATAGTCTATTCTGCTTTGAACCAGCAATGCGAAGCGAGGATGATAGAGCGTACATCAGTCACTATTCCTCATATTGGTGAAGCTTTGGTCATTTTCAAAACAAGAGAAGTTGCAGAAAGGGTGATTAGAAGACTAGATGAGGGATGCTTGTTGCTATCAAGTGGGAGGCCCCTTGTTGCTTCTTTCGCTAAGATTACTCCACCAGGGAAGCCGTCATTATTCTCAGGCCATATCAAACTACACAAAACTCAAACGCGACGGGAGATGAGAGATGCCGTGGCTACATCACATTCTTCTCAGCCTAACAACCTTGAATTTGACATGGCCATGGAATGGTGTTTGCACCAAGCCAGACACGAGCAGGCGTCTGAAAGTGTATCTAAGCGGCAATTGGAGGAGATGAAGTCGCTGCGGATTAACTTCAAGCTGAAACTTCCTTAGTTTCAGAATCATCTTGTCACTCTCGTACAGAAATATCACCAACTGTAGATTAGAAGGAAAAACACAAGGTCTCTTTTAGCCTCTAAAGACAGTGAGACTCAAGAATTTTGGTTTCATGCCATCCAGTCCCCCAACTTTGACTCGGAGGAATATACTGATGCGGCTTCTGGTCTCAAATCGGACGACCCTTTTGTAGTTACATATTTTTTTGTAAGGGTCAGTTTCACTAGTGAAGTGCTAAACTTTTGTGTGGATCAGGAAAGGTCAAGAGAGTAATTGTGACCTTTTAGGGGTTTAAAAAAGTTCCTTATGATGCACCTTTTAGCCTAACTAGTTGTTTCACCACTTAAGCCCGTCTCTTGTCATCTGAAAAAGAGTTTCAACTCATTCCATATCCAC
CDS Sequence
Protein Sequence