Gene Details:
- Gene ID: AT5G11240
- Gene Symbol: AtGHS40, GHS40, NuGWD1
- Gene Name: GLUCOSE HYPERSENSITIVE 40, Nuclear Glucose-responsive WD40 protein1
- Description: transducin family protein / WD-40 repeat family protein;(source:Araport11)
- TAIR Accession: locus:2147972
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0005052 — plant callus — callo (Spanish, exact), portion of plant callus tissue (exact), 植物カルス (Japanese, exact), callus (broad)
Gene Ontology:
- GO:0034455 — part of — t-UTP complex
- GO:0005634 — located in — nucleus
- GO:0006364 — acts upstream of or within — rRNA processing
- GO:0005730 — located in — nucleolus
Germplasm Phenotype:
- SALK_052897 — Homozygotes are embryo lethal. Somewhat reduced transmission through the pollen.
- SALK_073682C — is hypersensitive to Glucose&
- ghs40-2 — homozygous seed could not be obtained.
Function-related keywords:
Literature:
- A genome-wide transcriptome profiling reveals the early molecular events during callus initiation in Arabidopsis multiple organs. DOI: 10.1016/j.ygeno.2012.05.013 ; PMID: 22664253
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- The Pre-rRNA Processing Complex in Arabidopsis Includes Two WD40-Domain-Containing Proteins Encoded by Glucose-Inducible Genes and Plant-Specific Proteins. DOI: 10.1016/j.molp.2015.11.003 ; PMID: 26555280
- A WD40 protein, AtGHS40, negatively modulates abscisic acid degrading and signaling genes during seedling growth under high glucose conditions. DOI: 10.1007/s10265-016-0849-5 ; PMID: 27443795
Sequences:
cDNA Sequence
- >AT5G11240.1
CATTAAACCCGTAATAATTAAATTTGACTAATCCAACCCTTTTCGCTTCGCCGTTTTGAAACTTCAGAAAACAGAAAAACCTCTCAAAAACCCTAATTTGCTTTCTTCTTCTTCGCCGCGACGCCTGACTCTCTGTCGCTCTTCTCTTCCGCCACCGTCTAACTGATTCACCTCCTGGGCAAGCTGAAGAAAGTTGTACTTTGAAGCCTGCTTCTCCTTCGATTAGTCTGGGAAAGATGAATTTGGTGAATATTAAAGATGTATTGACTTCTTTCAGTCCTGCACTAGATTATCTCGCTCTTAGCACCGGAGATGGCCGTATCAAGATTTGGGATACTGTCAAGGGTCAGGTCCAAACAGAGTTTGCTGATATTGCATCTACAGAGGAGACAAACATATATACCAAAGTTGGAAAAGGTCACCTTTCAGTCGATTATACTTGCATGAAATGGTTGTCTCTGGAGAAAAAGAAGAAGAGGAAACTTGGAACTTCCGTATTGGTATTAGGAACTGGTGGAGGAGATGTTTTAGCACTTGATGTGGCTTCTGGTCAGCTGAAATGGAGAATAAGTGACTGTCATCCCGGTGGTGTTAATGCTGTTTCATCTTCAGCAAAGGCATCTTGCATATACAGCGGTGGGGCAGATGGGATGGTTTGTCAGATCGATCCCCACAGTGGAAATCTGATCAGAAAGTTCAAAGCTTCAACAAAAACAGTTTCTTCTTTATGTGTTTCACCAGATGGAAAAATATTAGTCACTGCATCTACTCAGTTGAAGACTTTTAACTGCTCTGATCTCAAGAAGATACAGAAGTTTACTGGTCATCCTGGGGTTGTGCGTTGTGTGGCTTTTACCGAGGATGGGAAGTATGTCCTCTCATCCGCAGTCGGGGAAAGATATATTGCAGTTTGGAAAACAGATGGTGCAAAGAAGCAGTCAGCTAGCTGTGTTCTTGCCTTAGAGCACCCTCCTGTCTTCGTGGATAGTTGGGGTGAAACAAATGAAAAAGGGTTATACGTTTTAGCAATTTCAGAAATAGGTGTCTGTTATTTTTGGTATGGGTCAAATGTTGAGGAACTATGCAATGCAACGCCTACAAAAGTCGCATTAGCAACTGCAGATTCTTCCCTCAAACCTTACAAGAGCTCATTGCCTTTAATCTTTGCTGCCAAATTACAAGGCATTTTGAAGCCTGGTTCTGCACATGCATTTATTGCATCCGGATTGCTTGTGAAACCTTCATTCCAGAAAATGGTGTTGCAGTTTGGCAATGACTTGGTGCTGAATGCCTCTAAGGATGGGATCCTTCTCCCTATCACTCAGTCAGTTTCCAAGTCCAGCAAGAGGCAAGGCGTGCAGAATAAAGTTACAACATTAGACCGTGCACATGCCGAGGATGCTTTGCTGCCAATCGCAAGAGTTGCTGATCTGCACGAGAAAAAGAGTGTACAACTACACTCATCTGATAAGGATACTTATATGGTTGACCAAAGTCATGCTGATCATGTAGAAACATTTAGCATGGAGGATAAGTTGAGATCGTTAGGGATACTGGGAGGTACAGATGAACATAAAAATCTTTCCTATGCTTCAATAATTGATGGAACTGATCTCAAGGCTTATCTACCACCAAAGAAGTTAAAGTCTGCTGTTTTGTCAATGGAACCCTCCACTGCATTCAAGACTCTAGAAGCTTTGGCTGCTATGTGGCAGACAAGGGCTTGTGGTGGGAGGCATCTTCTTCCATGGATATACAGCATAATGGTGAATCATAGTCATTACATCATGTCCCAAGAACCAAAAAACCAGCAGCTTCTTAATACATTGGTTAAGATTACCAAGTCCCGAGGAACGGCTCTTCAACAGTTACTACAGTTATCTGGGCGCTTACAACTTGTTACAGCTCAGATCAATAAAGCTGCAGGAAGTCAAACGCAAATAACAGCCCATGATCAAGAGATTGATGAAAGTGAGGATGAGGAAGAAGATGTAGAAGACCATTTCTATGGTGAGAATGATAATGAATCCGATTTAAGCAGTGACGATGGAAAGGATAAAGATGATTCCTTGATGGAGACGTAAGCTAATGAGCGAAGCGTAGAGAAAGGAGCGTGGCCTCTTCTTCTCACGTTTTTTTTTGGTCTCTTTTATGATTCCCATTATCTTGTATTAGAATTTGTATTTTTGATCCGAAGCGGGAATTTTTTTCACTCATTTCTTGTCTTCTATGCGTTGCACAGAATTATCTGTCTTTCTTTAAACTGAACAAGACTACAACGAAACGCTTAAGTTCCATAGCAAAGAAGTATTGCAACGGAAAGAAAGCCTTTACTTATCTAGTTCCTTTCATGTTGGATTACGTTCAAAGAGAAAAAA
CDS Sequence
Protein Sequence