Gene Details:

• Gene ID: AT5G11200
• Gene Symbol: UAP56b
• Gene Name: homolog of human UAP56 b
• Description: DEAD/DEAH box RNA helicase family protein;(source:Araport11)
• TAIR Accession: locus:2148027
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G11200.1     AT5G11200.2     AT5G11200.3

Plant Ontology Annotations:

• PO:0000293  — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)

Gene Ontology:

• GO:0003690  — enables — double-stranded DNA binding
• GO:0003729  — enables — mRNA binding
• GO:0003724  — enables — RNA helicase activity
• GO:0010099  — involved in — regulation of photomorphogenesis
• GO:0005515  — enables — protein binding
• GO:0003697  — enables — single-stranded DNA binding
• GO:0005634  — located in — nucleus
• GO:0016887  — enables — ATP hydrolysis activity
• GO:0005737  — located in — cytoplasm
• GO:0009505  — located in — plant-type cell wall
• GO:0003723  — enables — RNA binding
• GO:0009506  — located in — plasmodesma
• GO:0003676  — enables — nucleic acid binding
• GO:0003725  — enables — double-stranded RNA binding

Germplasm Phenotype:

• uap56b-2  — Mutants have normal levels of UAP56 protein and are indistinguishable from WT.

Function-related keywords:

• guard cell

Literature:

• New molecular phenotypes in the dst mutants of Arabidopsis revealed by DNA microarray analysis.   DOI:  10.1105/tpc.010295 ;  PMID:  11752382
• Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions.   DOI:  10.1091/mbc.e04-09-0791 ;  PMID:  15496452
• Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms.   DOI:  10.1104/pp.106.082057 ;  PMID:  16679420
• Proteomic analysis of seed dormancy in Arabidopsis.   DOI:  10.1104/pp.106.087452 ;  PMID:  17028149
• Mutations in CHLOROPLAST RNA BINDING provide evidence for the involvement of the chloroplast in the regulation of the circadian clock in Arabidopsis.   DOI:  10.1111/j.1365-313X.2007.03160.x ;  PMID:  17617174
• Alternative and effective proteomic analysis in Arabidopsis.   DOI:  10.1002/pmic.200700346 ;  PMID:  17828791
• Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis.   DOI:  10.1104/pp.108.126375 ;  PMID:  18775970
• The THO/TREX complex functions in disease resistance in Arabidopsis.   DOI:  10.4161/psb.18991 ;  PMID:  22499202
• Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm.   DOI:  10.1007/s12192-012-0398-3 ;  PMID:  23334891
• ALY RNA-Binding Proteins Are Required for Nucleocytosolic mRNA Transport and Modulate Plant Growth and Development.   DOI:  10.1104/pp.18.00173 ;  PMID:  29540591
• Protein and metabolite composition of Arabidopsis stress granules.   DOI:  10.1111/nph.15690 ;  PMID:  30664249
• The UAP56-Interacting Export Factors UIEF1 and UIEF2 Function in mRNA Export.   DOI:  10.1104/pp.18.01476 ;  PMID:  30700540
• Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method.   DOI:  10.3390/biom10040661 ;  PMID:  32344669
• The RNA helicase UAP56 and the E3 ubiquitin ligase COP1 coordinately regulate alternative splicing to repress photomorphogenesis in Arabidopsis.   DOI:  10.1093/plcell/koac235 ;  PMID:  35920787
• Arabidopsis cell wall proteome defined using multidimensional protein identification technology.   DOI:  10.1002/pmic.200500046 ;  PMID:  16287169
• Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism.   DOI:  10.1021/pr1009433 ;  PMID:  21166475
• Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling.   DOI:  10.1016/j.jprot.2017.06.004 ;  PMID:  28627464

Sequences: