Information report for AT5G11200
Gene Details
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Functional Descriptions
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0003690 — enables — double-stranded DNA binding
- GO:0003729 — enables — mRNA binding
- GO:0003724 — enables — RNA helicase activity
- GO:0010099 — involved in — regulation of photomorphogenesis
- GO:0005515 — enables — protein binding
- GO:0003697 — enables — single-stranded DNA binding
- GO:0005634 — located in — nucleus
- GO:0016887 — enables — ATP hydrolysis activity
- GO:0005737 — located in — cytoplasm
- GO:0009505 — located in — plant-type cell wall
- GO:0003723 — enables — RNA binding
- GO:0009506 — located in — plasmodesma
- GO:0003676 — enables — nucleic acid binding
- GO:0003725 — enables — double-stranded RNA binding
- uap56b-2 — Mutants have normal levels of UAP56 protein and are indistinguishable from WT.
Functional Keywords
Literature and News
- New molecular phenotypes in the dst mutants of Arabidopsis revealed by DNA microarray analysis. DOI: 10.1105/tpc.010295 ; PMID: 11752382
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- Proteomic investigation of the effect of salicylic acid on Arabidopsis seed germination and establishment of early defense mechanisms. DOI: 10.1104/pp.106.082057 ; PMID: 16679420
- Proteomic analysis of seed dormancy in Arabidopsis. DOI: 10.1104/pp.106.087452 ; PMID: 17028149
- Mutations in CHLOROPLAST RNA BINDING provide evidence for the involvement of the chloroplast in the regulation of the circadian clock in Arabidopsis. DOI: 10.1111/j.1365-313X.2007.03160.x ; PMID: 17617174
- Alternative and effective proteomic analysis in Arabidopsis. DOI: 10.1002/pmic.200700346 ; PMID: 17828791
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The THO/TREX complex functions in disease resistance in Arabidopsis. DOI: 10.4161/psb.18991 ; PMID: 22499202
- Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm. DOI: 10.1007/s12192-012-0398-3 ; PMID: 23334891
- ALY RNA-Binding Proteins Are Required for Nucleocytosolic mRNA Transport and Modulate Plant Growth and Development. DOI: 10.1104/pp.18.00173 ; PMID: 29540591
- Protein and metabolite composition of Arabidopsis stress granules. DOI: 10.1111/nph.15690 ; PMID: 30664249
- The UAP56-Interacting Export Factors UIEF1 and UIEF2 Function in mRNA Export. DOI: 10.1104/pp.18.01476 ; PMID: 30700540
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- The RNA helicase UAP56 and the E3 ubiquitin ligase COP1 coordinately regulate alternative splicing to repress photomorphogenesis in Arabidopsis. DOI: 10.1093/plcell/koac235 ; PMID: 35920787
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Analysis of protein complexes in Arabidopsis leaves using size exclusion chromatography and label-free protein correlation profiling. DOI: 10.1016/j.jprot.2017.06.004 ; PMID: 28627464
Gene Resources
- UniProt: F4JWF7
- EMBL: CP002688
- AlphaFoldDB: F4JWF7
- EnsemblPlants: AT5G11200.3
- Gramene: AT5G11200.3
- ExpressionAtlas: AT5G11200
- InterPro: IPR001650, IPR011545, IPR014001
Sequences
cDNA Sequence
- >AT5G11200.3
ATATTTAATTTTCTTCAGTCAGAGATTTCGAAACCCTAGTCGATTTCGAGATCCAACTAACTCTGCTCCTTATCTCAGCTTGTTGAATTTGCGAAGTATGGGAGACGCTAGAGACAACGAAGCCTACGAGGAGGAGCTCTTGGACTATGAAGAAGAAGACGAGAAGGTCCCAGATTCTGGAAACAAAGTTAACGGCGAAGCTGTGAAAAAAGGGTACGTGGGAATACACAGTTCTGGATTCAGAGACTTCCTTTTGAAACCGGAGCTTCTCAGAGCTATTGTTGACTCAGGATTTGAACATCCATCTGAAGTGCAACACGAATGTATCCCTCAAGCTATCTTGGGTATGGATGTTATCTGCCAAGCAAAGTCTGGTATGGGGAAGACTGCTGTGTTTGTCCTGTCTACTCTACAACAGATTGAACCATCTCCTGGCCAGGTTTCTGCACTTGTCTTGTGCCATACAAGAGAGCTAGCTTACCAGATCTGCAATGAGTTTGTGCGATTCAGTACCTATCTGCCTGATACAAAAGTTTCGGTGTTCTATGGTGGAGTCAACATTAAAATTCACAAAGACTTGCTGAAGAATGAATGTCCTCACATTGTTGTTGGTACCCCTGGTCGAGTGCTTGCACTTGCCAGGGAGAAAGATCTCTCTTTGAAGAATGTGAGGCATTTTATTCTTGATGAGTGTGATAAAATGCTCGAGTCACTTGACATGCGAAGGGATGTGCAGGAGATTTTCAAGATGACTCCTCATGACAAACAAGTAATGATGTTCTCAGCAACGCTCAGCAAAGAGATACGCCCAGTCTGCAAGAAGTTTATGCAAGATGGGTTGAGAACTCTGAGTGGAGACTCTGTAGCTTTGTGGTGGGTGGGTTTTGGGTCGGGGTACTGTGTTTTCCCAAGGTTTCATCGTGCTCGTATGGGTCTCAATGTTCCGAGCAATATTGATCCAATGGAAATATATGTTGATGATGAAGCCAAGTTGACTCTTCATGGACTTGTCCAGCACTACATCAAACTGAGCGAGATGGAGAAAAATCGCAAGTTGAATGACCTTCTTGATGCGTTGGACTTCAATCAAGTTGTCATTTTTGTGAAGAGCGTGAGCAGGGCTGCGGAGCTGAACAAGTTACTGGTGGAATGCAATTTCCCCTCAATATGCATACACTCTGGCATGTCTCAAGAAGAGAGGTTGACTCGATACAAAAGTTTCAAGGAAGGGCACAAGAGGATCCTTGTGGCGACTGACTTGGTAGGAAGAGGGATTGACATAGAGCGTGTCAACATTGTTATCAACTATGACATGCCAGATTCTGCGGATACCTATCTTCATAGGGTTGGGAGAGCTGGTAGATTTGGAACCAAGGGTCTTGCAATCACATTTGTTGCATCTGCTTCAGATTCAGAGGTCCTTAATCAGGTTCAAGAGAGGTTTGAGGTCGATATAAAGGAGCTTCCTGAGCAGATTGATACATCGACTTACATGCCGTCTTAAACAAGTAGCATCATCTCTGAGGAACGAACCTCTTCAGATTTCAACCTTTTAGGTGTTCAAAGGGGTCATGGAGGTCCACAACTATCTCTCACACCGTTTGTTGCTTCGCTATTTTAGACTTTTCTATGAGGACAAGTTTTTCCATATATTTAGACCGTTTTGTAACTCTTGAAAAATGAGATTGAGCTACTCTCCAAATCGCGCACAGTTGAGAGCTCTCCTGTTTTTTGTACTAGTGATGGTTATCTTTAAAATATTAAGATTTCAGGATTTATTCTTTGGCTTGATCATTGATTAAATGTTCCTAGTGAATTGATCTAGTTTGATGC - >AT5G11200.1
ATATTTAATTTTCTTCAGTCAGAGATTTCGAAACCCTAGTCGATTTCGAGATCCAACTAACTCTGCTCCTTATCTCAGCTTGTTGAATTTGCGAAGTATGGGAGACGCTAGAGACAACGAAGCCTACGAGGAGGAGCTCTTGGACTATGAAGAAGAAGACGAGAAGGTCCCAGATTCTGGAAACAAAGTTAACGGCGAAGCTGTGAAAAAAGGGTACGTGGGAATACACAGTTCTGGATTCAGAGACTTCCTTTTGAAACCGGAGCTTCTCAGAGCTATTGTTGACTCAGGATTTGAACATCCATCTGAAGTGCAACACGAATGTATCCCTCAAGCTATCTTGGGTATGGATGTTATCTGCCAAGCAAAGTCTGGTATGGGGAAGACTGCTGTGTTTGTCCTGTCTACTCTACAACAGATTGAACCATCTCCTGGCCAGGTTTCTGCACTTGTCTTGTGCCATACAAGAGAGCTAGCTTACCAGATCTGCAATGAGTTTGTGCGATTCAGTACCTATCTGCCTGATACAAAAGTTTCGGTGTTCTATGGTGGAGTCAACATTAAAATTCACAAAGACTTGCTGAAGAATGAATGTCCTCACATTGTTGTTGGTACCCCTGGTCGAGTGCTTGCACTTGCCAGGGAGAAAGATCTCTCTTTGAAGAATGTGAGGCATTTTATTCTTGATGAGTGTGATAAAATGCTCGAGTCACTTGACATGCGAAGGGATGTGCAGGAGATTTTCAAGATGACTCCTCATGACAAACAAGTAATGATGTTCTCAGCAACGCTCAGCAAAGAGATACGCCCAGTCTGCAAGAAGTTTATGCAAGATGGGTTGAGAACTCTGAGTGGAGACTCTGTAGCTTTGTGGTGGGTGGGTTTTGGGTCGGGGTACTGTGTTTTCCCAAGGTTTCATCGTGCTCGTATGGGTCTCAATGTTCCGAGCAATATTGATCCAATGGAAATATATGTTGATGATGAAGCCAAGTTGACTCTTCATGGACTTGTCCAGCACTACATCAAACTGAGCGAGATGGAGAAAAATCGCAAGTTGAATGACCTTCTTGATGCGTTGGACTTCAATCAAGTTGTCATTTTTGTGAAGAGCGTGAGCAGGGCTGCGGAGCTGAACAAGTTACTGGTGGAATGCAATTTCCCCTCAATATGCATACACTCTGGCATGTCTCAAGAAGAGAGGTTGACTCGATACAAAAGTTTCAAGGAAGGGCACAAGAGGATCCTTGTGGCGACTGACTTGGTAGGAAGAGGGATTGACATAGAGCGTGTCAACATTGTTATCAACTATGACATGCCAGATTCTGCGGATACCTATCTTCATAGGGTTGGGAGAGCTGGTAGATTTGGAACCAAGGGTCTTGCAATCACATTTGTTGCATCTGCTTCAGATTCAGAGGTCCTTAATCAGGTTCAAGAGAGGTTTGAGGTCGATATAAAGGAGCTTCCTGAGCAGATTGATACATCGACTTACATGCCGTCTTAAACAAGTAGCATCATCTCTGAGGAACGAACCTCTTCAGATTTCAACCTTTTAGGTGTTCAAAGGGGTCATGGAGGTCCACAACTATCTCTCACACCGTTTGTTGCTTCGCTATTTTAGACTTTTCTATGAGGACAAGTTTTTCCATATATTTAGACCGTTTTGTAACTCTTGAAAAATGAGATTGAGCTACTCTCCAAATCGCGCACAGTTGAGAGCTCTCCTGTTTTTTGTACTAGTGATGGTTATCTTTAAAATATTAAGATTTCAGGATTTATTCTTTGGCTTGATCATTGATTAAATGTTCCTAGTGAATTGATCTAGTTTGATGC - >AT5G11200.2
ATATTTAATTTTCTTCAGTCAGAGATTTCGAAACCCTAGTCGATTTCGAGATCCAACTAACTCTGCTCCTTATCTCAGCTTGTTGAATTTGCGAAGTATGGGAGACGCTAGAGACAACGAAGCCTACGAGGAGGAGCTCTTGGACTATGAAGAAGAAGACGAGAAGGTCCCAGATTCTGGAAACAAAGTTAACGGCGAAGCTGTGAAAAAAGGGTACGTGGGAATACACAGTTCTGGATTCAGAGACTTCCTTTTGAAACCGGAGCTTCTCAGAGCTATTGTTGACTCAGGATTTGAACATCCATCTGAAGTGCAACACGAATGTATCCCTCAAGCTATCTTGGGTATGGATGTTATCTGCCAAGCAAAGTCTGGTATGGGGAAGACTGCTGTGTTTGTCCTGTCTACTCTACAACAGATTGAACCATCTCCTGGCCAGGTTTCTGCACTTGTCTTGTGCCATACAAGAGAGCTAGCTTACCAGATCTGCAATGAGTTTGTGCGATTCAGTACCTATCTGCCTGATACAAAAGTTTCGGTGTTCTATGGTGGAGTCAACATTAAAATTCACAAAGACTTGCTGAAGAATGAATGTCCTCACATTGTTGTTGGTACCCCTGGTCGAGTGCTTGCACTTGCCAGGGAGAAAGATCTCTCTTTGAAGAATGTGAGGCATTTTATTCTTGATGAGTGTGATAAAATGCTCGAGTCACTTGACATGCGAAGGGATGTGCAGGAGATTTTCAAGATGACTCCTCATGACAAACAAGTAATGATGTTCTCAGCAACGCTCAGCAAAGAGATACGCCCAGTCTGCAAGAAGTTTATGCAAGATGGGTTGAGAACTCTGAGTGGAGACTCTGTAGCTTTGTGGTGGGTGGGTTTTGGGTCGGGGTACTGTGTTTTCCCAAGGTTTCATCGTGCTCGTATGGGTCTCAATGTTCCGAGCAATATTGATCCAATGGAAATATATGTTGATGATGAAGCCAAGTTGACTCTTCATGGACTTGTCCAGCACTACATCAAACTGAGCGAGATGGAGAAAAATCGCAAGTTGAATGACCTTCTTGATGCGTTGGACTTCAATCAAGTTGTCATTTTTGTGAAGAGCGTGAGCAGGGCTGCGGAGCTGAACAAGTTACTGGTGGAATGCAATTTCCCCTCAATATGCATACACTCTGGCATGTCTCAAGAAGAGAGGTTGACTCGATACAAAAGTTTCAAGGAAGGGCACAAGAGGATCCTTGTGGCGACTGACTTGGTAGGAAGAGGGATTGACATAGAGCGTGTCAACATTGTTATCAACTATGACATGCCAGATTCTGCGGATACCTATCTTCATAGGGTTGGGAGAGCTGGTAGATTTGGAACCAAGGGTCTTGCAATCACATTTGTTGCATCTGCTTCAGATTCAGAGGTCCTTAATCAGGTTCAAGAGAGGTTTGAGGTCGATATAAAGGAGCTTCCTGAGCAGATTGATACATCGACTTACATGCCGTCTTAAACAAGTAGCATCATCTCTGAGGAACGAACCTCTTCAGATTTCAACCTTTTAGGTGTTCAAAGGGGTCATGGAGGTCCACAACTATCTCTCACACCGTTTGTTGCTTCGCTATTTTAGACTTTTCTATGAGGACAAGTTTTTCCATATATTTAGACCGTTTTGTAACTCTTGAAAAATGAGATTGAGCTACTCTCCAAATCGCGCACAGTTGAGAGCTCTCCTGTTTTTTGTACTAGTGATGGTTATCTTTAAAATATTAAGATTTCAGGATTTATTCTTTGGCTTGATCATTGATTAAATGTTCCTAGTGAATTGATCTAGTTTGATGC
CDS Sequence
Protein Sequence