Information report for AT5G11170
Gene Details
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Functional Descriptions
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0005634 — located in — nucleus
- GO:0003723 — enables — RNA binding
- GO:0046686 — acts upstream of or within — response to cadmium ion
- GO:0003690 — enables — double-stranded DNA binding
- GO:0009506 — located in — plasmodesma
- GO:0003724 — enables — RNA helicase activity
- GO:0003725 — enables — double-stranded RNA binding
- GO:0005515 — enables — protein binding
- GO:0003727 — enables — single-stranded RNA binding
- GO:0005730 — located in — nucleolus
- GO:0005829 — located in — cytosol
- GO:0010099 — involved in — regulation of photomorphogenesis
- GO:0003729 — enables — mRNA binding
- GO:0016887 — enables — ATP hydrolysis activity
- GO:0003676 — enables — nucleic acid binding
- uap56a-2 — Mutants have normal levels of UAP56 protein and are indistinguishable from WT.
Functional Keywords
Literature and News
- Isolation, sequence analysis, and expression studies of florally expressed cDNAs in Arabidopsis. DOI: 10.1023/B:PLAN.0000019063.18097.62 ; PMID: 15010618
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- The THO/TREX complex functions in disease resistance in Arabidopsis. DOI: 10.4161/psb.18991 ; PMID: 22499202
- ALY RNA-Binding Proteins Are Required for Nucleocytosolic mRNA Transport and Modulate Plant Growth and Development. DOI: 10.1104/pp.18.00173 ; PMID: 29540591
- The UAP56-Interacting Export Factors UIEF1 and UIEF2 Function in mRNA Export. DOI: 10.1104/pp.18.01476 ; PMID: 30700540
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- The RNA helicase UAP56 and the E3 ubiquitin ligase COP1 coordinately regulate alternative splicing to repress photomorphogenesis in Arabidopsis. DOI: 10.1093/plcell/koac235 ; PMID: 35920787
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Proteome changes in Arabidopsis thaliana roots upon exposure to Cd2+. DOI: 10.1093/jxb/erl170 ; PMID: 17075075
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- Proteomic analysis of the Arabidopsis nucleolus suggests novel nucleolar functions. DOI: 10.1091/mbc.e04-09-0791 ; PMID: 15496452
- The early responses of Arabidopsis thaliana cells to cadmium exposure explored by protein and metabolite profiling analyses. DOI: 10.1002/pmic.200500543 ; PMID: 16502469
- Proteome changes in Arabidopsis thaliana roots upon exposure to Cd2+. DOI: 10.1093/jxb/erl170 ; PMID: 17075075
Gene Resources
- UniProt: F4JWF3
- EMBL: CP002688
- AlphaFoldDB: F4JWF3
- EnsemblPlants: AT5G11170.2
- Gramene: AT5G11170.2
- ExpressionAtlas: AT5G11170
- InterPro: IPR001650, IPR011545, IPR014001
Sequences
cDNA Sequence
- >AT5G11170.2
ATTTACGACACCAACGCGGCGTTGGTGATTCATTCTCTTCAGTCAGAGATTTCGAAACCCTAGTCGATTTCGAGATCCAACCAACTCTGCTCCTTATCTCAGCTTGTTGAATTTGCGAAGTATGGGAGACGCTAGAGACAACGAAGCCTACGAGGAGGAGCTCTTGGACTATGAAGAAGAAGACGAGAAGGTCCCAGATTCTGGAAACAAAGTTAACGGTGAAGCCGTGAAAAAAGGGTACGTGGGAATACACAGTTCTGGATTCAGAGACTTCCTTTTAAAACCGGAGCTTCTCAGAGCTATTGTTGACTCTGGATTTGAACATCCATCTGAAGGTAATAAACGATATTTCAATCTATTGGTTTGGAGTGAGCTTAAACATGTGCTAAAGCCACCAATTTAAAAGATATGGAGGTTATCATCTACTTATAAAGGCTTTCTTCGGTACAATTTTCTTTGGTTCTCCACCAGTGCAACATGAATGTATCCCTCAAGCTATCTTGGGCATGGATGTCATCTGCCAAGCAAAGTCTGGTATGGGGAAGACTGCTGTGTTTGTCCTGTCTACTCTACAACAGATTGAACCATCTCCTGGCCAGGTTTCTGCACTTGTCTTGTGCCATACAAGAGAGCTAGCTTACCAGATCTGCAATGAGTTTGTGCGATTCAGTACCTATCTGCCTGATACAAAGGTTTCGGTGTTCTATGGTGGAGTCAACATTAAAATTCACAAAGACTTGCTGAAGAATGAATGTCCTCACATTGTTGTTGGTACCCCTGGTCGGGTGCTTGCACTTGCCAGGGAGAAAGATCTCTCTTTGAAGAATGTGAGGCATTTTATTCTTGATGAATGTGATAAAATGCTCGAGTCACTTGACATGCGAAGGGATGTGCAGGAGATTTTCAAGATGACTCCTCATGACAAACAAGTAATGATGTTCTCAGCAACGCTCAGCAAAGAGATACGCCCAGTCTGCAAAAAATTTATGCAAGATCCAATGGAAATATATGTCGATGATGAAGCCAAGTTGACTCTTCATGGGCTTGTCCAGCACTATATCAAACTGAGCGAGATGGAGAAAAACCGGAAGTTGAATGACCTTCTTGATGCGTTGGACTTCAATCAAGTTGTCATTTTTGTGAAGAGCGTGAGCAGGGCTGCTGAGCTGAACAAGTTACTGGTGGAATGCAATTTCCCCTCAATATGCATCCACTCTGGAATGTCTCAAGAAGAGAGGTTGACTCGATACAAAAGTTTCAAGGAAGGGCACAAAAGGATCCTTGTGGCGACTGACTTGGTAGGAAGAGGGATTGACATTGAGCGTGTCAACATTGTCATCAACTATGACATGCCAGATTCTGCTGATACCTATCTTCACAGGGTTGGCAGAGCTGGTAGATTTGGAACCAAGGGTCTTGCAATCACATTTGTTGCATCTGCTTCAGATTCAGAGGTTCTTAACCAGGTACAAGAGAGGTTTGAGGTTGATATAAAGGAACTTCCGGAGCAGATTGATACTTCAACCTACATGCCTTCTTAAACAAGTAGCACGTCCCTCAGGAAAGAAGCTCTTCAGATTTCAACCTTGTAGGTGTTCGAAGGGTGATGGGGGTTCACAACTATCTCTCGCTCCGTTTGTTTTAGTGTTTTCTATGACGACATTTTTTTCCATATGTTTAGAACGTCTGTTGTACTCTTTAAAGGAGATTCGAGTCACTCTCCAAATCGCACAGTTAAAAGCTGTCCAGTTTTTTGTACAAGAGATTATTATGTTTGAAATATCAGGATTTAGTCTCGACCTGATTACTGTGTTCCTTAGGAATCGATCTATTATCAATTTATCATGGTGTTGCTAAGAATCGTCATTCATCAGCGTTACTTCCTTCATGTGATGCTTTTTTTTTATAACACA - >AT5G11170.1
ATTTACGACACCAACGCGGCGTTGGTGATTCATTCTCTTCAGTCAGAGATTTCGAAACCCTAGTCGATTTCGAGATCCAACCAACTCTGCTCCTTATCTCAGCTTGTTGAATTTGCGAAGTATGGGAGACGCTAGAGACAACGAAGCCTACGAGGAGGAGCTCTTGGACTATGAAGAAGAAGACGAGAAGGTCCCAGATTCTGGAAACAAAGTTAACGGTGAAGCCGTGAAAAAAGGGTACGTGGGAATACACAGTTCTGGATTCAGAGACTTCCTTTTAAAACCGGAGCTTCTCAGAGCTATTGTTGACTCTGGATTTGAACATCCATCTGAAGGTAATAAACGATATTTCAATCTATTGGTTTGGAGTGAGCTTAAACATGTGCTAAAGCCACCAATTTAAAAGATATGGAGGTTATCATCTACTTATAAAGGCTTTCTTCGGTACAATTTTCTTTGGTTCTCCACCAGTGCAACATGAATGTATCCCTCAAGCTATCTTGGGCATGGATGTCATCTGCCAAGCAAAGTCTGGTATGGGGAAGACTGCTGTGTTTGTCCTGTCTACTCTACAACAGATTGAACCATCTCCTGGCCAGGTTTCTGCACTTGTCTTGTGCCATACAAGAGAGCTAGCTTACCAGATCTGCAATGAGTTTGTGCGATTCAGTACCTATCTGCCTGATACAAAGGTTTCGGTGTTCTATGGTGGAGTCAACATTAAAATTCACAAAGACTTGCTGAAGAATGAATGTCCTCACATTGTTGTTGGTACCCCTGGTCGGGTGCTTGCACTTGCCAGGGAGAAAGATCTCTCTTTGAAGAATGTGAGGCATTTTATTCTTGATGAATGTGATAAAATGCTCGAGTCACTTGACATGCGAAGGGATGTGCAGGAGATTTTCAAGATGACTCCTCATGACAAACAAGTAATGATGTTCTCAGCAACGCTCAGCAAAGAGATACGCCCAGTCTGCAAAAAATTTATGCAAGATCCAATGGAAATATATGTCGATGATGAAGCCAAGTTGACTCTTCATGGGCTTGTCCAGCACTATATCAAACTGAGCGAGATGGAGAAAAACCGGAAGTTGAATGACCTTCTTGATGCGTTGGACTTCAATCAAGTTGTCATTTTTGTGAAGAGCGTGAGCAGGGCTGCTGAGCTGAACAAGTTACTGGTGGAATGCAATTTCCCCTCAATATGCATCCACTCTGGAATGTCTCAAGAAGAGAGGTTGACTCGATACAAAAGTTTCAAGGAAGGGCACAAAAGGATCCTTGTGGCGACTGACTTGGTAGGAAGAGGGATTGACATTGAGCGTGTCAACATTGTCATCAACTATGACATGCCAGATTCTGCTGATACCTATCTTCACAGGGTTGGCAGAGCTGGTAGATTTGGAACCAAGGGTCTTGCAATCACATTTGTTGCATCTGCTTCAGATTCAGAGGTTCTTAACCAGGTACAAGAGAGGTTTGAGGTTGATATAAAGGAACTTCCGGAGCAGATTGATACTTCAACCTACATGCCTTCTTAAACAAGTAGCACGTCCCTCAGGAAAGAAGCTCTTCAGATTTCAACCTTGTAGGTGTTCGAAGGGTGATGGGGGTTCACAACTATCTCTCGCTCCGTTTGTTTTAGTGTTTTCTATGACGACATTTTTTTCCATATGTTTAGAACGTCTGTTGTACTCTTTAAAGGAGATTCGAGTCACTCTCCAAATCGCACAGTTAAAAGCTGTCCAGTTTTTTGTACAAGAGATTATTATGTTTGAAATATCAGGATTTAGTCTCGACCTGATTACTGTGTTCCTTAGGAATCGATCTATTATCAATTTATCATGGTGTTGCTAAGAATCGTCATTCATCAGCGTTACTTCCTTCATGTGATGCTTTTTTTTTATAACACA
CDS Sequence
Protein Sequence