Gene Details:
- Gene ID: AT5G11100
- Gene Symbol: ATSYTD, NTMC2T2.2, NTMC2TYPE2.2, SYT4, SYTD
- Gene Name: synaptotagmin 4
- Description: Calcium-dependent lipid-binding (CaLB domain) family protein;(source:Araport11)
- TAIR Accession: locus:2184931
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0044272 — acts upstream of or within — sulfur compound biosynthetic process
- GO:0048364 — acts upstream of or within — root development
- GO:0010286 — acts upstream of or within — heat acclimation
- GO:0005783 — is active in — endoplasmic reticulum
- GO:0009888 — acts upstream of or within — tissue development
- GO:0007049 — acts upstream of or within — cell cycle
- GO:0005886 — located in — plasma membrane
- GO:0003674 — enables — molecular_function
- GO:1903338 — acts upstream of or within — regulation of cell wall organization or biogenesis
- GO:0009834 — acts upstream of or within — plant-type secondary cell wall biogenesis
Function-related keywords:
Literature:
- Genomic analysis of synaptotagmin genes. DOI: 10.1006/geno.2001.6619 ; PMID: 11543631
- Arabidopsis synaptotagmin SYT1, a type I signal-anchor protein, requires tandem C2 domains for delivery to the plasma membrane. DOI: 10.1074/jbc.M109.084046 ; PMID: 20498364
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- Synaptotagmin gene content of the sequenced genomes. DOI: 10.1186/1471-2164-5-43 ; PMID: 15238157
- Evolutionary genomics of plant genes encoding N-terminal-TM-C2 domain proteins and the similar FAM62 genes and synaptotagmin genes of metazoans. DOI: 10.1186/1471-2164-8-259 ; PMID: 17672888
Sequences:
cDNA Sequence
- >AT5G11100.1
ATGGGTTTTCTCTTTGGTTTGTTCATAGGAATCGCGGTTTCTTTCGGTTTGGTCGTCGCATTTGCTCGCTACTCTAGTGTCAGATCCACTCGTCGAGCTGATTTGGCAAAGACCATTGCTGCATTTGCAAGAATGACAGTTCAAGATTCGAGAAAACTTCTCCCGGGAGATTTTTATCCTTCTTGGGTTGTGTTTTCTCAGAGACAAAATTAAATTGGCTTAATCTTGAACTTGAAAAGATCTGGCCTTATGTAAATGAGGCAGCTTCTGAGCTGATTAAAAGCAGTGTGGAACCAGTACTTGAACAGTATACACCAGCTATGTTAGCATCTCTCAAGTTCTCTAAATTCACACTTGGGACTGTGGCTCCTCAGTTCACAGGAGTTTCTATCTTAGAAAGTGAAAGTGGACCTAATGGAATCACAATGGAACTTGAAATGCAATGGGATGGTAATCCAAAAATCGTGTTGGATGTCAAAACCTTACTTGGCGTGTCTCTACCTATTGAGGTCAAAAACATAGGATTCACAGGTGTTTTCAGGCTGATTTTCAAACCTCTTGTTGATGAATTCCCTTGCTTTGGGGCACTTTCTTATTCACTCCGCGAGAAGAAAGGGCTTGATTTTACCCTCAAAGTTATAGGTGGTGAATTAACATCAATTCCAGGGATTTCAGATGCAATCGAAGAAACTATTCGTGACGCCATTGAAGACAGTATAACATGGCCAGTTAGGAAAATTATACCTATTTTACCAGGAGATTACAGTGATCTGGAGTTGAAACCTGTTGGAAAATTGGATGTGAAGGTTGTGCAAGCAAAGGACTTAGCTAACAAAGACATGATTGGAAAATCTGATCCTTACGCTATTGTATTCATTCGCCCTTTGCCTGACAGAACCAAAAAGACCAAAACTATTAGTAACTCGTTGAATCCGATTTGGAATGAACATTTTGAGTTCATTGTGGAAGATGTCTCAACTCAACATTTGACAGTAAGAGTCTTTGACGACGAAGGAGTTGGATCTTCTCAGCTTATTGGGGCTGCTCAAGTACCGTTAAATGAACTCGTACCCGGGAAAGTTAAAGATATTTGGTTGAAGTTAGTCAAGGATTTAGAGATCCAAAGGGATACAAAAAATAGGGGTCAGGTGCAGTTGGAGCTCTTATATTGTCCCTTAGGCAAAGAAGGCGGATTGAAGAACCCGTTTAACCCGGACTACTCATTGACCATTTTAGAGAAGGTACTGAAGCCGGAAAGCGAGGATTCGGATGCCACGGATATGAAAAAACTGGTGACCTCGAAGAAAAAAGATGTGATAGTGAGAGGAGTGTTGTCTGTGACAGTGGTGGCAGCTGAAGACTTACCAGCTGTAGATTTTATGGGAAAAGCAGATGCATTTGTGGTAATCACATTGAAGAAATCAGAAACGAAATCCAAGACAAGGGTAGTACCGGATAGCTTGAATCCGGTTTGGAACCAGACGTTTGATTTTGTAGTGGAAGATGCTTTGCATGATCTATTGACGCTTGAAGTATGGGACCATGACAAATTTGGCAAGGACAAGATAGGGAGAGTGATAATGACATTGACGCGAGTGATGTTAGAAGGAGAGTTTCAAGAGTGGTTTGAGTTAGATGGAGCTAAATCAGGGAAGCTTTGTGTCCATCTTAAATGGACTCCTAGGCTTAAGCTCAGAGACGCCTCTTGA
CDS Sequence
Protein Sequence