Information report for AT5G11060
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0003011 — root vascular system — sistema vascular de la raíz (Spanish, exact), 根維管系 (Japanese, exact), root vein (related)
- PO:0005059 — root endodermis — endodermis de la raíz (Spanish, exact), 根内皮 (Japanese, exact)
- PO:0006203 — pericycle — periciclo (Spanish, exact), portion of pericycle tissue (exact), portion of pericyclic tissue (exact), 内鞘 (Japanese, exact)
- PO:0025257 — primary root elongation zone — zona de elongación de la raíz primaria (Spanish, exact), 一次根伸長帯（層） (Japanese, exact)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
- GO:0005829 — located in — cytosol
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0005634 — located in — nucleus
- GO:0005737 — located in — cytoplasm
- GO:0009416 — acts upstream of or within — response to light stimulus
- GO:0000981 — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
Functional Keywords
Literature and News
- Three knotted1-like homeobox genes in Arabidopsis. DOI: 10.1007/BF00020208 ; PMID: 8980519
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The FHY3 and FAR1 genes encode transposase-related proteins involved in regulation of gene expression by the phytochrome A-signaling pathway. DOI: 10.1046/j.1365-313x.2003.01741.x ; PMID: 12753585
- Monitoring genome-wide changes in gene expression in response to endogenous cytokinin reveals targets in Arabidopsis thaliana. DOI: 10.1016/s0014-5793(03)01194-3 ; PMID: 14623097
- Comprehensive comparison of auxin-regulated and brassinosteroid-regulated genes in Arabidopsis. DOI: 10.1104/pp.103.034736 ; PMID: 15047898
- Global transcript profiling of primary stems from Arabidopsis thaliana identifies candidate genes for missing links in lignin biosynthesis and transcriptional regulators of fiber differentiation. DOI: 10.1111/j.1365-313X.2005.02403.x ; PMID: 15918878
- A map of KNAT gene expression in the Arabidopsis root. DOI: 10.1007/s11103-005-1673-9 ; PMID: 16463096
- Analysis of phase of LUCIFERASE expression reveals novel circadian quantitative trait loci in Arabidopsis. DOI: 10.1104/pp.105.074518 ; PMID: 16461388
- The relationship of drought-related gene expression in Arabidopsis thaliana to hormonal and environmental factors. DOI: 10.1093/jxb/ern155 ; PMID: 18552355
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- The Class II KNOX genes KNAT3 and KNAT7 work cooperatively to influence deposition of secondary cell walls that provide mechanical support to Arabidopsis stems. DOI: 10.1111/tpj.14541 ; PMID: 31587430
- Understanding the Modus Operandi of Class II KNOX Transcription Factors in Secondary Cell Wall Biosynthesis. DOI: 10.3390/plants11040493 ; PMID: 35214825
- Transcription factors KNAT3 and KNAT4 are essential for integument and ovule formation in Arabidopsis. DOI: 10.1093/plphys/kiac513 ; PMID: 36342216
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Gene Resources
- UniProt: A0A178UC59
- EMBL: LUHQ01000005
- AlphaFoldDB: A0A178UC59
- EnsemblPlants: AT5G11060.1
- Gramene: AT5G11060.1
- KEGG: ath:AT5G11060
- Orthologous matrix: ANIFDIG
- ExpressionAtlas: AT5G11060
- InterPro: IPR001356, IPR005539, IPR005540
- PANTHER: PTHR11850
- SUPFAM: SSF46689
- PROSITE: PS50071, PS51213
- Gene3D: 1.10.10.60
- SWISS-MODEL: A0A178UC59
- Conserved Domain Database: cd00086
Sequences
cDNA Sequence
- >AT5G11060.1
TTCTTCAAAATTTGTTTTAAAATCCTTTGCAGATTTGTGTAATTTATTTACTTTTGCTTGGTACCAAAAACAAATAGAGCAAAAATGAGCAATTCTTTTTGATAAGCAGAAAAAAATGTTAGGAACGAATGAAGAAAAAGTGATGCAGCTATTTCCTTTTACTGTCACTTCGTAATTCGTATCATTCTTTTGCCGTCAACTTCTACCATCTCTTTTTTTTGTAAAACGATAAAACTTTTTGTTGTCGCTGTAAATGTTAGTAATCTGACCTAATCCCAATTTATTATGGATCACCAAAAAGCTGGTACTCTACAATTTAATAATAAAAGAAGAAGAATAAATATAGGAATAAATCGTCTTTTTTGGTGTAAGCTACATATAAAATTCAAACCGTCAAACACACATACACATCGAAACCCTTATATTTCATTTTCTTTCTGTTTTAGAGAAGAAAGTTTCTATAATTGATTGATAAATCTGAACATCAAAGCTAAGAATTTCTCTTCTTTTTTTCTTCTTAATTCATCTTTCCCTCTCCGAAACAGAAATTCAAAAACAAATTCAACACGAAAACGATGGCGTTTCATAACAATCACTTTAATCATTTCACCGACCAACAACAACATCAGCCTCCTCCTCCGCCGCAACAGCAGCAGCAACAACATTTTCAAGAATCAGCACCCCCTAATTGGCTCCTCCGCTCCGACAACAACTTCCTCAATCTCCACACAGCTGCCTCTGCCGCCGCTACAAGCTCCGATTCTCCTTCTTCCGCCGCCGCTAACCAGTGGCTCTCACGATCCTCATCCTTCCTCCAACGAGGCAACACCGCAAACAACAACAACAACGAAACATCCGGTGACGTCATCGAAGACGTTCCCGGCGGAGAGGAGTCAATGATCGGAGAGAAGAAGGAGGCGGAGAGGTGGCAGAATGCGAGACACAAGGCGGAGATACTGTCTCATCCACTATACGAGCAACTTTTGTCGGCACACGTGGCGTGCCTGAGGATCGCAACGCCGGTGGATCAGCTTCCGAGGATAGACGCACAGCTTGCTCAGTCTCAAAACGTCGTGGCTAAGTACTCAACTTTAGAAGCCGCTCAAGGACTCCTCGCCGGCGATGACAAGGAGCTTGACCACTTCATGACGCATTATGTACTATTGCTTTGCTCTTTCAAAGAACAACTGCAACAGCATGTTCGTGTTCATGCAATGGAAGCTGTTATGGCCTGTTGGGAGATTGAACAGTCGCTTCAAAGTTTTACAGGGGTATCTCCTGGTGAAGGCACAGGAGCAACAATGTCTGAGGATGAAGATGAGCAAGTAGAGAGTGATGCTCATTTGTTTGATGGAAGCTTAGATGGGTTAGGGTTTGGTCCTCTAGTTCCCACTGAGAGCGAGAGATCTTTGATGGAACGAGTCAGACAAGAACTCAAACATGAACTCAAGCAGGGTTACAAGGAGAAAATTGTGGACATAAGAGAGGAGATACTGAGGAAGAGAAGAGCTGGAAAATTACCAGGAGACACCACCTCTGTTCTCAAATCATGGTGGCAATCTCATTCTAAGTGGCCTTACCCTACTGAGGAAGATAAGGCGAGGTTGGTGCAGGAGACGGGTTTGCAGCTCAAACAGATAAACAATTGGTTCATCAATCAAAGAAAGAGGAATTGGCATAGCAATCCATCTTCTTCTACCGTCTCAAAGAATAAACGCCGAAGCAATGCAGGTGAAAACAGCGGAAGAGACCGTTGAGATCAAGCTTGCATGTAGAGATCCAAAAGCTTTATAGAAAGGTGGAGGCATGAAGACAAAGAATTCTTACACAACAAACGTAGGACGTAATTTTGTGCCAGTACATGGTATGGCTTTCATATTTGGTAATGATTAGGGCCACACAAAATTAAACCCCAAAGCATGATTTGTAATATGAGGTTTTAGATGGACTTTATGATAGGATCGTCAGTCTTCACTGCCATCTCCATTCTCCACCATCAATCCATCATTATATCTTGTGAATAACATGGAAATTTCTCGTTATGCATTTAATTTGTGCAATCATTGGCCGTAATCTACACAAATATACATATTAATTTAGCTTGAATATATTATCTCAATTAATGGTTTCAATTTTTTTGTTTTGTTTTGTGAGTGGAACCACTTTTTATGTGGAATTGTTAACCCTAATGCCAAAATCTAAACTCTGCGAAGGTCGCCAGCAAACGAAAGAAAGAGATTATCTCCGCCGTTGTCAAAATTATTAAAAGGGATTATAAAGTTTTTCAATTTGGGCCCCTTTCCTGCGTTTTCTTTATTGTCCATTATGGGCCTCATTGTCTCTAGACTCTCTACCTTACAGGGTTTGCTCGCCGACGTTTCATACATAGTCCTCTTGTTTCTAAGGATGCCGATTAACACTTTTCATTTTTATCAACAAACTGGCTTGCAAGGGTTTTGAACCTGAGTGATGACCTACCATTTCTATCCATACTATAATCAGATTTTTTTTTGTTCTTTTTTATAATCAAG
CDS Sequence
Protein Sequence