Gene Details:

• Gene ID: AT5G11010
• Gene Symbol: GRC3
• Gene Name:
• Description: Pre-mRNA cleavage complex II protein family;(source:Araport11)
• TAIR Accession: locus:2183830
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G11010.1     AT5G11010.2     AT5G11010.3     AT5G11010.4

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)

Gene Ontology:

• GO:0005515  — enables — protein binding
• GO:0006364  — involved in — rRNA processing
• GO:0005634  — located in — nucleus
• GO:0051731  — enables — polynucleotide 5-hydroxyl-kinase activity GO:0051731 22523 F kinase activity IBA none PANTHER:PTN000978836|UniProtKB:E7F3I6|UniProtKB:Q5SY16|SGD:S000003958|UniProtKB:Q92989|WB:WBGene00010304 Communication:501741973 2023-06-07 AT5G11010 locus:2183830 AT5G11010 involved in cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000448 27794 P nucleobase-containing compound metabolic process IBA none PANTHER:PTN000298031|PomBase:SPCC830.03|SGD:S000003958|ZFIN:ZDB-GENE-070629-1 Communication:501741973 2023-06-07 AT5G11010 locus:2183830 AT5G11010 is active in nucleus GO:0005634 537 C nucleus IBA none PANTHER:PTN000978836|UniProtKB:Q57VM9|PomBase:SPCC830.03|UniProtKB:Q582U0|UniProtKB:Q585W7|UniProtKB:Q57Y15|SGD:S000003958|UniProtKB:Q5SY16|UniProtKB:Q92989|SGD:S000005776|TAIR:locus:2084938 Communication:501741973 2023-06-07 AT5G11010 locus:2183830 AT5G11010 enables polynucleotide 5-hydroxyl-kinase activity
• GO:0051731  — enables — polynucleotide 5-hydroxyl-kinase activity GO:0051731 22523 F transferase activity ISS none UniProtKB:Q07845 Communication:501789215 2021-04-01 AT5G11010 gene:1006229505 AT5G11010.3 located in nucleus GO:0005634 537 C nucleus ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G11010 gene:3443442 AT5G11010.1 located in nucleus GO:0005634 537 C nucleus ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G11010 locus:2183830 AT5G11010 involved in cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000448 27794 P other cellular processes IBA none PANTHER:PTN000298031|PomBase:SPCC830.03|SGD:S000003958|ZFIN:ZDB-GENE-070629-1 Communication:501741973 2023-06-07 AT5G11010 locus:2183830 AT5G11010 involved in cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) GO:0000448 27794 P other metabolic processes IBA none PANTHER:PTN000298031|PomBase:SPCC830.03|SGD:S000003958|ZFIN:ZDB-GENE-070629-1 Communication:501741973 2023-06-07 AT5G11010 gene:6532554641 AT5G11010.4 located in nucleus GO:0005634 537 C nucleus ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G11010 locus:2183830 AT5G11010 involved in rRNA processing GO:0006364 7076 P other cellular processes ISS none UniProtKB:Q07845 Communication:501789215 2021-03-31

Function-related keywords:

• root

Literature:

• Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana.   DOI:  10.1074/jbc.M308435200 ;  PMID:  14576160
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Capturing the phosphorylation and protein interaction landscape of the plant TOR kinase.   DOI:  10.1038/s41477-019-0378-z ;  PMID:  30833711
• NIGT1 family proteins exhibit dual mode DNA recognition to regulate nutrient response-associated genes in Arabidopsis.   DOI:  10.1371/journal.pgen.1009197 ;  PMID:  33137118

Sequences: