Information report for AT5G10940
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0045717 — acts upstream of or within — negative regulation of fatty acid biosynthetic process
- GO:0080008 — part of — Cul4-RING E3 ubiquitin ligase complex
- GO:0005737 — located in — cytoplasm
- GO:0045717 — involved in — negative regulation of fatty acid biosynthetic process
- GO:0005515 — enables — protein binding
- GO:0005829 — located in — cytosol
- GO:0047484 — involved in — regulation of response to osmotic stress
- GO:0009788 — involved in — negative regulation of abscisic acid-activated signaling pathway
- GO:1901000 — involved in — regulation of response to salt stress
- GO:0005737 — is active in — cytoplasm
- GO:0009506 — located in — plasmodesma
- GO:0005634 — located in — nucleus
- asg2-1 — Increased fatty acid content.
Functional Keywords
Literature and News
- MicroRNAs in plants. DOI: 10.1101/gad.1004402 ; PMID: 12101121
- Evolution of Arabidopsis microRNA families through duplication events. DOI: 10.1101/gr.4680506 ; PMID: 16520461
- Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases. DOI: 10.1105/tpc.107.055418 ; PMID: 18223036
- Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes. DOI: 10.1105/tpc.108.058891 ; PMID: 18552200
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis. DOI: 10.1074/mcp.M600429-MCP200 ; PMID: 17317660
- Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases. DOI: 10.1105/tpc.107.055418 ; PMID: 18223036
- Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes. DOI: 10.1105/tpc.108.058891 ; PMID: 18552200
Gene Resources
- UniProt: A0A654G076
- EMBL: CACRSJ010000110, LR881470
- AlphaFoldDB: A0A654G076
- EnsemblPlants: AT5G10940.2
- Gramene: AT5G10940.2
- ExpressionAtlas: AT5G10940
- InterPro: IPR001680, IPR011990, IPR015943
- PANTHER: PTHR15574, PTHR15574:SF40
- SUPFAM: SSF48452, SSF50978
- PROSITE: PS50082, PS50294
- Gene3D: 1.25.40.10, 2.130.10.10
- OrthoDB: A0A654G076
- SWISS-MODEL: A0A654G076
Sequences
cDNA Sequence
- >AT5G10940.2
CTGAGATGTAATTAGAGAACATAGATAACCCAACACATGCGCCGCAGAGGATCTCACCGAGAATGTAGAACCGGGCACGAGAAATAGCGTCAGATTACAAAGAGCCAAAGAAGGAGGGCTTCTTCTTCCAATTTGTGATCGGTGCTGATCGATTTCTCCATGGATAATCTCAGTTTTCACGATGGTAACATCTTCAATCTCCTCCACACAAGGTCCCAGGACCCAAGTCATGAGGTTGATCAAAGAATGCAGTTTCACTCTTCCTTGGTTCGGAGACTTTCTCAGGAGCAAGAATTGGAGGGACATCAAGGCTGTGTTAATGCTTTAGCGTGGAACTCTAATGGTTCACTTTTGATATCTGGATCAGATGATTTAAGGATCAATATTTGGAATTACTCCAGTCGGAAGCTTTTGCATTCTATAGATACAGGGCATACTGCCAACATCTTCTGTACGAAGTTTGTCCCTGAAACCTCTGACGAGCTTGTGGTATCTGGTGCTGGAGATGCTGAGGTTAGGCTATTCAATACATCCCGGTTAAGCGGTAGAGCAGAAGATGACAATGCTATTATTCCATCAGCATTGTACCAATGTCACACACGAAGAGTGAAAAAACTAGCTGTCGAACCTGGTAACCCCAATGTTGTATGGAGTGCTAGTGAAGATGGGACTTTAAGGCAGCATGATTTCCGGGAATCTACCTCTTGTCCTCCTGCTGGAACCGCTCACCAAGAATGCCGCAGTGTTCTGCTTGATCTGCGCAGTGGTGCCAAAAGAGCACTAGCTGATCCTCCAAAGCAAACTCTCTCCCTGAAGTCTTGTGATATAAGTGCCACAAGACCGCACCTACTTCTTGTTGGTGGAAGTGATGCATTTGCTCGTTTATACGATAGAAGGATGCTCCCACCGTTGGCATCAAGTCGGAAAAGGATGCCTCCACCTCCGTGTGTCAATTACTTCTGTCCCATGCATCTTTCTGAACGTGGGCGAACAAATTTGCACCTAACACATGTTACTTTCAGTCCTAATGGCGAAGAAGTTTTGCTCAGTTACAGTGGGGAGCATGTCTACCTGATGAATGTAAATAATGGCACTGGAATCATGCAATACACACCAGGAGATGTAGATAACTTGTTTTCTTTCAGTAACAACCTCCACGATGTAGAATCTCCACCTCAGGTTTCCACCACTCCTCAAAATGGCTTTCACAGAAGTAGCAATGCTGCAACGGTTAAGAAGTGTACGGAATTGGTAGAAATTGCTAAATGGTCTTTAGAAGAGGGTACAGATGTTTTCTATGCAATTGAGGCAGCTAATGAAGTTCTGGATGCTCATTCTAATGATATTGAGTCTGCGCTAAGGCATGAATGCCTTTGTACTCGTGCCGCATTGTTACTCAAGAGGAAGTGGAAGAATGATGCTCATATGGCCGTAAGAGATTGCCATAATGCTCGGAGAATTGATGCTTCATCCTTTAAAGCTCATTACTACATGTCTGAAGCGCTGCAGCAATTGGGAAAATGTAAAGAAGCTCTAGATTTTGCGACTGCTGCACAACATATGAACCCATCAGATGCCGATATAGTGGCAAAAGTGGAGAGCATTAAAAGGGATCTTCAAGCAGCTGGAGCTGAGAAAAACGAAGAGACAGGAGCTGGAACTACTAGAGTACTTTCTTTAAGCGACATACTATATAGATCAGAGGCCAACAGTGACAGTTCACATGATATGTCGAGATCCGAAAGAGAAGATTCTGATTATGATGAGGAATTGGAGTTGGATATTCAAACTTCGTTGTCTGATGATGAAGGACGAGATACAGACTCAAATTCTATGCGTGGCAGTCTCAACTTACGAATTCATAGAGTAGGTGATGATAAACCGATGGAAAATACAGTTGACAATGCCTCCTCAGGAACTGCATCGTCATCTCAAAATGATAGGACGTCTTATCAGCCAGAGGGAGCCATTGATATGAAACGTAGATATGTTGGCCACTGTAACGTAGGAACTGATATTAAGCAGGCCAGTTTTCTTGGTCAGAGAGGTGAATATATTGCAAGTGGAAGCGATGACGGTCGGTGGTTTATATGGGAGAAACAGACTGGAAGGCTTATGAAAGTGCTCGTTGGCGATGAATCAGTTTTGAACTGCATTCAATGCCATCCGTTTGATAGTGTTGTAGCAACGAGTGGAATTGATAACACAATAAAGATATGGAGCCCAACCGCATCAGTCCCATCAATTGTAGCAGGAGGATCAGCTGGACCAGCAACCGCCAATGTAGTGGAAGTAATGGAGAGTAATCAACAGAAGCTAAGCCGCAATCGAGAGAATCCTCTGTCTGTGGAGCTAATGCAAAGGTTTAGGATGCAAGAATTTGCAGAAGGAAACTTTCACCCATTTGAATGTACTCAGAGCTAAAGCAGGAGGGAACTGTAGAGGTATAATAAGCTTGCTTTGTGAAGGTGATGGTGGAATAACAATGGTTTTGAATATGAATAATGAATAATAAGGTTTGATTAGGTTTCATATGTAGCAAAAGCTTTCTCTCTGTAAAACTCATGCATAGCTTCCTTCTAAAAGCTTTTTTTGTTGTTGTTGTTGTTGTTGTACAGTTTGATATTGGCTTCTTCTTTTGAATGTGAATATTCATCGTTATTTTACATTGTTTTTTCATTTCTGTCGCGTTTAGTAGACAGCATAAGGCTGTATGTGTTATGTGTCCAATCTCGTTATTTTAATATAGACTTGTGGAGGAAGCTCTAACCACTTTGCT - >AT5G10940.1
CTGAGATGTAATTAGAGAACATAGATAACCCAACACATGCGCCGCAGAGGATCTCACCGAGAATGTAGAACCGGGCACGAGAAATAGCGTCAGATTACAAAGAGCCAAAGAAGGAGGGCTTCTTCTTCCAATTTGTGATCGGTGCTGATCGATTTCTCCATGGATAATCTCAGTTTTCACGATGGTAACATCTTCAATCTCCTCCACACAAGGTCCCAGGACCCAAGTCATGAGGTTGATCAAAGAATGCAGTTTCACTCTTCCTTGGTTCGGAGACTTTCTCAGGAGCAAGAATTGGAGGGACATCAAGGCTGTGTTAATGCTTTAGCGTGGAACTCTAATGGTTCACTTTTGATATCTGGATCAGATGATTTAAGGATCAATATTTGGAATTACTCCAGTCGGAAGCTTTTGCATTCTATAGATACAGGGCATACTGCCAACATCTTCTGTACGAAGTTTGTCCCTGAAACCTCTGACGAGCTTGTGGTATCTGGTGCTGGAGATGCTGAGGTTAGGCTATTCAATACATCCCGGTTAAGCGGTAGAGCAGAAGATGACAATGCTATTATTCCATCAGCATTGTACCAATGTCACACACGAAGAGTGAAAAAACTAGCTGTCGAACCTGGTAACCCCAATGTTGTATGGAGTGCTAGTGAAGATGGGACTTTAAGGCAGCATGATTTCCGGGAATCTACCTCTTGTCCTCCTGCTGGAACCGCTCACCAAGAATGCCGCAGTGTTCTGCTTGATCTGCGCAGTGGTGCCAAAAGAGCACTAGCTGATCCTCCAAAGCAAACTCTCTCCCTGAAGTCTTGTGATATAAGTGCCACAAGACCGCACCTACTTCTTGTTGGTGGAAGTGATGCATTTGCTCGTTTATACGATAGAAGGATGCTCCCACCGTTGGCATCAAGTCGGAAAAGGATGCCTCCACCTCCGTGTGTCAATTACTTCTGTCCCATGCATCTTTCTGAACGTGGGCGAACAAATTTGCACCTAACACATGTTACTTTCAGTCCTAATGGCGAAGAAGTTTTGCTCAGTTACAGTGGGGAGCATGTCTACCTGATGAATGTAAATAATGGCACTGGAATCATGCAATACACACCAGGAGATGTAGATAACTTGTTTTCTTTCAGTAACAACCTCCACGATGTAGAATCTCCACCTCAGGTTTCCACCACTCCTCAAAATGGCTTTCACAGAAGTAGCAATGCTGCAACGGTTAAGAAGTGTACGGAATTGGTAGAAATTGCTAAATGGTCTTTAGAAGAGGGTACAGATGTTTTCTATGCAATTGAGGCAGCTAATGAAGTTCTGGATGCTCATTCTAATGATATTGAGTCTGCGCTAAGGCATGAATGCCTTTGTACTCGTGCCGCATTGTTACTCAAGAGGAAGTGGAAGAATGATGCTCATATGGCCGTAAGAGATTGCCATAATGCTCGGAGAATTGATGCTTCATCCTTTAAAGCTCATTACTACATGTCTGAAGCGCTGCAGCAATTGGGAAAATGTAAAGAAGCTCTAGATTTTGCGACTGCTGCACAACATATGAACCCATCAGATGCCGATATAGTGGCAAAAGTGGAGAGCATTAAAAGGGATCTTCAAGCAGCTGGAGCTGAGAAAAACGAAGAGACAGGAGCTGGAACTACTAGAGTACTTTCTTTAAGCGACATACTATATAGATCAGAGGCCAACAGTGACAGTTCACATGATATGTCGAGATCCGAAAGAGAAGATTCTGATTATGATGAGGAATTGGAGTTGGATATTCAAACTTCGTTGTCTGATGATGAAGGACGAGATACAGACTCAAATTCTATGCGTGGCAGTCTCAACTTACGAATTCATAGAGTAGGTGATGATAAACCGATGGAAAATACAGTTGACAATGCCTCCTCAGGAACTGCATCGTCATCTCAAAATGATAGGACGTCTTATCAGCCAGAGGGAGCCATTGATATGAAACGTAGATATGTTGGCCACTGTAACGTAGGAACTGATATTAAGCAGGCCAGTTTTCTTGGTCAGAGAGGTGAATATATTGCAAGTGGAAGCGATGACGGTCGGTGGTTTATATGGGAGAAACAGACTGGAAGGCTTATGAAAGTGCTCGTTGGCGATGAATCAGTTTTGAACTGCATTCAATGCCATCCGTTTGATAGTGTTGTAGCAACGAGTGGAATTGATAACACAATAAAGATATGGAGCCCAACCGCATCAGTCCCATCAATTGTAGCAGGAGGATCAGCTGGACCAGCAACCGCCAATGTAGTGGAAGTAATGGAGAGTAATCAACAGAAGCTAAGCCGCAATCGAGAGAATCCTCTGTCTGTGGAGCTAATGCAAAGGTTTAGGATGCAAGAATTTGCAGAAGGAAACTTTCACCCATTTGAATGTACTCAGAGCTAAAGCAGGAGGGAACTGTAGAGGTATAATAAGCTTGCTTTGTGAAGGTGATGGTGGAATAACAATGGTTTTGAATATGAATAATGAATAATAAGGTTTGATTAGGTTTCATATGTAGCAAAAGCTTTCTCTCTGTAAAACTCATGCATAGCTTCCTTCTAAAAGCTTTTTTTGTTGTTGTTGTTGTTGTTGTACAGTTTGATATTGGCTTCTTCTTTTGAATGTGAATATTCATCGTTATTTTACATTGTTTTTTCATTTCTGTCGCGTTTAGTAGACAGCATAAGGCTGTATGTGTTATGTGTCCAATCTCGTTATTTTAATATAGACTTGTGGAGGAAGCTCTAACCACTTTGCT
CDS Sequence
Protein Sequence