Information report for AT5G10790
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0070461 — part of — SAGA-type complex
- GO:0008270 — enables — zinc ion binding
- GO:0006511 — involved in — ubiquitin-dependent protein catabolic process
- GO:0004843 — enables — cysteine-type deubiquitinase activity
- GO:0016579 — involved in — protein deubiquitination
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- The ubiquitin-specific protease family from Arabidopsis. AtUBP1 and 2 are required for the resistance to the amino acid analog canavanine. DOI: 10.1104/pp.124.4.1828 ; PMID: 11115897
- Functional characterization of the Arabidopsis ubiquitin-specific protease gene family reveals specific role and redundancy of individual members in development. DOI: 10.1111/j.1365-313X.2008.03557.x ; PMID: 18485060
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- UBIQUITIN-SPECIFIC PROTEASES function in plant development and stress responses. DOI: 10.1007/s11103-017-0633-5 ; PMID: 28695315
- The Adaptor Protein ENY2 Is a Component of the Deubiquitination Module of the Arabidopsis SAGA Transcriptional Co-activator Complex but not of the TREX-2 Complex. DOI: 10.1016/j.jmb.2018.03.018 ; PMID: 29588169
- Three functionally redundant plant-specific paralogs are core subunits of the SAGA histone acetyltransferase complex in Arabidopsis. DOI: 10.1016/j.molp.2021.03.014 ; PMID: 33737195
Gene Resources
- UniProt: A0A178UPE9
- EMBL: CACRSJ010000110, LUHQ01000005
- AlphaFoldDB: A0A178UPE9
- EnsemblPlants: AT5G10790.1
- Gramene: AT5G10790.1
- KEGG: ath:AT5G10790
- ExpressionAtlas: AT5G10790
- InterPro: IPR001394, IPR001607, IPR013083
- PANTHER: PTHR21646, PTHR21646:SF49
- SUPFAM: SSF54001, SSF57850
- PROSITE: PS00972, PS50235, PS50271
- Gene3D: 3.30.40.10, 3.90.70.10
- SWISS-MODEL: A0A178UPE9
- Conserved Domain Database: cd02660
Sequences
cDNA Sequence
- >AT5G10790.1
CAAAAATGTTTACTTTAATGATTATAAGATTTGCAAGAAATAAAAGATTTACAGGAAAGAAAAAAACACCCAAAAAAGAAAGTAGAAAAAAAGAGAAATAGATATTTCCCCATTAATCTTGTAAAATTTTCCTTTGCATAATCCTCCGATCTTTTAGTAAAAATTTGATAAAAACGAACAGAGAGATGATGACTCTTAACACGCTAACCTGATCCGAAATTTTCTTTCTTTTTTGTTTTTCATCACAGAAAAAAAGAGGATTGATTCTTTGATCTCAAACAAAAACTCTTACTTTGGTCACTGTGATTTTTGATTCCATTTATTCTTCTTTTTGAAGCGAATCTGAGTTTTGTTTTCATGTCCGCGAGGATTTCATTTCTGAAAAATCCCGATCCGTGCAATCACTTATCTGATTATAAGCTTAGATATGGTACTGATGGTTACAAATCTTTCAATAACTTGTTCAGATGCTTCAACGATGCAAGGATTAAGATCAAACTTCAAGGAATCGACATACCCAGATGCAGTTATTGTTCTGTTTATCAAAAGAGACTCTACATCTGTTTGATCTGTCGTTCCATTTCTTGTTCAAGTCATATCCTTTTGCATACCCAGTTGAATAAAGGCCATGATATCGCCATTGATGTCGAAAGATCTGAGCTTTATTGCTGTGCTTGCATCGATCAAGTGTATGATTCTGAGTTCGACGAGGTTGTTGTGTCTAAGCAGCTTTTTGGTTTGGGTATGTCTGTTAAATCAGGGGCTGATGTTGTTGCGGTTAGATCGAACAAGAAGAGGAGATTGGACTCGCAATTGATCATAGGGTCGAATTTTTTGGTCTCACCTCGAGATCGAAGGGAGAAATGGACGTTTCCTTTGGGGTTGAGAGGTTTGAACAATCTGGGAAGCACTTGTTTTATGAATGCTGTGTTGCAAGCACTTGTTCATGCTCCTCCTTTGAGAAACTTTTGGTTGAGTGGTCAACATAATCGTGATCTTTGTCCTAGAAGAACAATGGGTTTGTTGTGTTTGCCTTGTGATCTTGATGTTATCTTCTCTGCTATGTTTTCTGGTGATCGGACTCCATATAGCCCTGCTCATTTGCTTTACAGTTGGTGGCAGCACTCAACGAATCTAGCTACATATGAGCAGCAAGATTCTCACGAGTTCTTCATTTCGCTATTGGACCGTATCCATGAGAACGAAGGGAAGTCGAAATGTTTGTATCAAGATAATGAGGAGTGTCAGTGTATCACCCACAAGGCATTCTCTGGTCTTTTAAGATCAGATGTCACCTGTACAACATGTGGATCCACATCAACAACATATGACCCGTTTATCGACATTTCACTTACTTTAGATTCAATGAATGGATTCTCTCCCGCTGATTGCAGAAAGAACAGATACAGTGGTGGACCAAGTGTGAACGCAATCATGCCAACTCTCTCGGGTTGCTTAGATTTCTTCACACGGTCAGAGAAACTCGGTCCAGACCAGAAACTAAACTGCCAAAGCTGTGGAGAAAAGAGAGAATCTTCGAAACAAATGTCTATAAGAAGACTTCCTCTGCTTCTTTGCTTGCACGTAAAGCGTTTCGAACATTCTCTTACCCGTAAAACCTCGAGAAAAATTGATAGCTACTTGCAGTATCCGTTCCGCCTAAACATGTCTCCTTACCTCTCTTCCTCCATCATCGGAAAGCGGTTTGGGAACAGAATATTTGCCTTTGATGGAGAAGGTGAGTATGACAGTTCGTCATCATCATCTCCATCAGCGGAGTTTGAGATATTTGCGGTTGTGACACACAAGGGGATGTTGGAATCAGGTCACTATGTGACGTATCTGAGGCTTAAAGGGTTGTGGTATAGATGTGATGATGCATGGATCAATGAGGTTGAAGAAGAAGTGGTGAGAGGATGTGAGTGTTACATGTTGTTCTATGCACAAGAGACAGTGATTCAAAAAGCTCATAAGGAGTTGAGTTATCAAGTTATCTCCATGGCTGATGCATTTCCCTTTGCTGATTGCTGACTCTTAACTTGGCCAAAGATTTTGACGCATTTTCCCTTACTACTTTTTTTAATTGATTTAAGGTTTATGCCAAATATTTGAAAGCCAAGTTTAATGATTAAATTTCTTTCACTATATCAGTGTTCAAGTTTACGACATCAGACTCTCACGTCAGCGTCAGCTAGAAAATACGACTTATGCTTCTCACATGTTAACTTCTGCAGTAAACTATGAAAATGGGACAGTAATACACAAAATTTCTTACATATTTTTTTAAGAGTCAACGAGACAAAAGAGGTTAATAATCTTCAGAGAAAAACATTCCACGTGTACCGCAGAGACCAAAACAAACAATCATCTCATCTCATGCCTCGTCTGCGCCAATCTCTATCTCGCTCTCTGCTTCTATCATGATCGTCTCTCTCGCGACTTGAGCTCTTTGCTCTTCGTTTTCGGTCCTTGTCCAAATCATGTTGTTGCCTATCTCTGTCTCTGTGT - >AT5G10790.2
CAAAAATGTTTACTTTAATGATTATAAGATTTGCAAGAAATAAAAGATTTACAGGAAAGAAAAAAACACCCAAAAAAGAAAGTAGAAAAAAAGAGAAATAGATATTTCCCCATTAATCTTGTAAAATTTTCCTTTGCATAATCCTCCGATCTTTTAGTAAAAATTTGATAAAAACGAACAGAGAGATGATGACTCTTAACACGCTAACCTGATCCGAAATTTTCTTTCTTTTTTGTTTTTCATCACAGAAAAAAAGAGGATTGATTCTTTGATCTCAAACAAAAACTCTTACTTTGGTCACTGTGATTTTTGATTCCATTTATTCTTCTTTTTGAAGCGAATCTGAGTTTTGTTTTCATGTCCGCGAGGATTTCATTTCTGAAAAATCCCGATCCGTGCAATCACTTATCTGATTATAAGCTTAGATATGGTACTGATGGTTACAAATCTTTCAATAACTTGTTCAGATGCTTCAACGATGCAAGGATTAAGATCAAACTTCAAGGAATCGACATACCCAGATGCAGTTATTGTTCTGTTTATCAAAAGAGACTCTACATCTGTTTGATCTGTCGTTCCATTTCTTGTTCAAGTCATATCCTTTTGCATACCCAGTTGAATAAAGGCCATGATATCGCCATTGATGTCGAAAGATCTGAGCTTTATTGCTGTGCTTGCATCGATCAAGTGTATGATTCTGAGTTCGACGAGGTTGTTGTGTCTAAGCAGCTTTTTGGTTTGGGTATGTCTGTTAAATCAGGGGCTGATGTTGTTGCGGTTAGATCGAACAAGAAGAGGAGATTGGACTCGCAATTGATCATAGGGTCGAATTTTTTGGTCTCACCTCGAGATCGAAGGGAGAAATGGACGTTTCCTTTGGGGTTGAGAGGTTTGAACAATCTGGGAAGCACTTGTTTTATGAATGCTGTGTTGCAAGCACTTGTTCATGCTCCTCCTTTGAGAAACTTTTGGTTGAGTGGTCAACATAATCGTGATCTTTGTCCTAGAAGAACAATGGGTTTGTTGTGTTTGCCTTGTGATCTTGATGTTATCTTCTCTGCTATGTTTTCTGGTGATCGGACTCCATATAGCCCTGCTCATTTGCTTTACAGTTGGTGGCAGCACTCAACGAATCTAGCTACATATGAGCAGCAAGATTCTCACGAGTTCTTCATTTCGCTATTGGACCGTATCCATGAGAACGAAGGGAAGTCGAAATGTTTGTATCAAGATAATGAGGAGTGTCAGTGTATCACCCACAAGGCATTCTCTGGTCTTTTAAGATCAGATGTCACCTGTACAACATGTGGATCCACATCAACAACATATGACCCGTTTATCGACATTTCACTTACTTTAGATTCAATGAATGGATTCTCTCCCGCTGATTGCAGAAAGAACAGATACAGTGGTGGACCAAGTGTGAACGCAATCATGCCAACTCTCTCGGGTTGCTTAGATTTCTTCACACGGTCAGAGAAACTCGGTCCAGACCAGAAACTAAACTGCCAAAGCTGTGGAGAAAAGAGAGAATCTTCGAAACAAATGTCTATAAGAAGACTTCCTCTGCTTCTTTGCTTGCACGTAAAGCGTTTCGAACATTCTCTTACCCGTAAAACCTCGAGAAAAATTGATAGCTACTTGCAGTATCCGTTCCGCCTAAACATGTCTCCTTACCTCTCTTCCTCCATCATCGGAAAGCGGTTTGGGAACAGAATATTTGCCTTTGATGGAGAAGGTGAGTATGACAGTTCGTCATCATCATCTCCATCAGCGGAGTTTGAGATATTTGCGGTTGTGACACACAAGGGGATGTTGGAATCAGGTCACTATGTGACGTATCTGAGGCTTAAAGGGTTGTGGTATAGATGTGATGATGCATGGATCAATGAGGTTGAAGAAGAAGTGGTGAGAGGATGTGAGTGTTACATGTTGTTCTATGCACAAGAGACAGTGATTCAAAAAGCTCATAAGGAGTTGAGTTATCAAGTTATCTCCATGGCTGATGCATTTCCCTTTGCTGATTGCTGACTCTTAACTTGGCCAAAGATTTTGACGCATTTTCCCTTACTACTTTTTTTAATTGATTTAAGGTTTATGCCAAATATTTGAAAGCCAAGTTTAATGATTAAATTTCTTTCACTATATCAGTGTTCAAGTTTACGACATCAGACTCTCACGTCAGCGTCAGCTAGAAAATACGACTTATGCTTCTCACATGTTAACTTCTGCAGTAAACTATGAAAATGGGACAGTAATACACAAAATTTCTTACATATTTTTTTAAGAGTCAACGAGACAAAAGAGGTTAATAATCTTCAGAGAAAAACATTCCACGTGTACCGCAGAGACCAAAACAAACAATCATCTCATCTCATGCCTCGTCTGCGCCAATCTCTATCTCGCTCTCTGCTTCTATCATGATCGTCTCTCTCGCGACTTGAGCTCTTTGCTCTTCGTTTTCGGTCCTTGTCCAAATCATGTTGTTGCCTATCTCTGTCTCTGTGT
CDS Sequence
Protein Sequence