Information report for AT5G10650
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0005515 — enables — protein binding
- GO:0061630 — enables — ubiquitin protein ligase activity
- GO:0005634 — located in — nucleus
- GO:0097427 — located in — microtubule bundle
- GO:0008017 — enables — microtubule binding
Functional Keywords
Literature and News
- Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome. DOI: 10.1186/gb-2002-3-4-research0016 ; PMID: 11983057
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Large-scale identification of leaf senescence-associated genes. DOI: 10.1046/j.1365-313x.2003.01908.x ; PMID: 14617064
- Binding of arabinogalactan proteins by Yariv phenylglycoside triggers wound-like responses in Arabidopsis cell cultures. DOI: 10.1104/pp.104.039370 ; PMID: 15235117
- Genome analysis and functional characterization of the E2 and RING-type E3 ligase ubiquitination enzymes of Arabidopsis. DOI: 10.1104/pp.105.067983 ; PMID: 16339806
- ATR and ATM play both distinct and additive roles in response to ionizing radiation. DOI: 10.1111/j.1365-313X.2006.02931.x ; PMID: 17227549
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The E3 ligase MREL57 modulates microtubule stability and stomatal closure in response to ABA. DOI: 10.1038/s41467-021-22455-y ; PMID: 33846350
- JUL1, Ring-Type E3 Ubiquitin Ligase, Is Involved in Transcriptional Reprogramming for ERF15-Mediated Gene Regulation. DOI: 10.3390/ijms24020987 ; PMID: 36674500
- Repertoire of plant RING E3 ubiquitin ligases revisited: New groups counting gene families and single genes. DOI: 10.1371/journal.pone.0203442 ; PMID: 30169501
Gene Resources
- UniProt: Q5XEP8
- EMBL: BT015918, BT020582, CP002688
- AlphaFoldDB: Q5XEP8
- EnsemblPlants: AT5G10650.1, AT5G10650.2
- Gramene: AT5G10650.1, AT5G10650.2
- ExpressionAtlas: AT5G10650
- InterPro: IPR001841, IPR013083, IPR045191
- PANTHER: PTHR22937, PTHR22937:SF195
- SUPFAM: SSF57850
- PROSITE: PS50089
- Gene3D: 3.30.40.10
- SWISS-MODEL: Q5XEP8
Sequences
cDNA Sequence
- >AT5G10650.2
CTCGGCAAAGGAAAAAAATAAAGGTAACGCCGGAAAGTTTTTTTTTTCTTCCCCTCTCTCTCGCAGCAGCTGACATGGTTTCTCTAAAATGATCTCGAGAAAGAAAAAAAAAAGTTGATATATTTGTTGTATCTGATTCTCTCTTGTTGTTTCTGTATTTGGATTGAAATTTTCAACTTTGGAAGATTTTTCTTCAATTTCACAGTTAGGGTTCGAATCCTGTTAACTTGTAGCTTGATCGGAAAAATTTTGAAGGGCAAAGTTTCTTTAATTGTCTCATCTCTCTGTTTAGATTTTGTTGTTGATGGCTTTGTTTCATGGTGAAGCTGGAATCGCGGAGAAAAGGGTTGTTGTTATGTTTATGGAAAGTCCGTGTAATTCGAATCAGACCCTTTCTTTTGGAACCATTAAAGTCACCTCCTTTCTCTCTCTCTCTTTTCGTTTCTTTTAACTAGTTTTTTGTTCATCTCTCTCTCTTATCTATCTACGATCACCGAATCATCAGCTTGATGTTTATGATACATCAAGTGTTTTGCTCTGGATGATTTATTATCTACATCCATGTTGTTACCGGAAAGTGTTTCTTTGATTCATGGATGGATGTGCTGGTAAACGATCTGTTGACCGGTTGGTTGTGCCTCGGAAAGCCAGTGGTCTTACCCTGCGTGAGAATATGAACAAGACAGATGGTAAGAATGTTCCTTTCTGCAGCCGAGTTGGTTGTACTGCAAAGGTAACTTCTACCAAGAGATCTCGGATTGGCTCTACGGATAACAATACAAAAGTTGGTCTGCCTCCGGTTCCATCTACCTTAAATAGAAAGGAAATTGTTGGGAGCTCATCTCGTACTCCTGGTGGATTTGGATACTTGAGAAAGCCAGCCAAAGTTACTGCAAGAAGACAGCCGTCATCTAGTTTAGACACTGAATCTTCGGAAACGAGTTGTATTCATGATGATCCAGCTGCAACAGAGCCCACACTTCCACGCCAAAAGACTAAAAGAGTCACAATCAATGTTCATCCTCAAAGCGCTGTCTCTAGAGAAGTTGTAATAACAAAGGCAGGAAGCTCAAGTAGAGGAACCAGCAGAATTAGTCATCCAAAGTCTGAATTGGGTACCCGCGATGCTCTGACGGGTCCTTCTGTTTCTACATCTTCTGGTAACAGTGAGCACACTGTAAGAGGCGGTTTGAGTAGGCATAGATTGAGGAACTTGAGCTGCAATTCTGTGTCTGATGTTCTTCCAACTAACTCAAACTCAGCAACAAAAATCAGTGTGACTAAAAAGAAAAACGCTGATGGAGAGAGCAGCTTATCTAGCAAAGGTAGTAAGACTAGTGTGTTGGTTCCAAAGGTAAGGAATCAAATTTCTTCTCATGGCAATGGCGTCACAGTTTCTGATAACAGAAGAAATCGAGTAGTACCAAGTATTAGGGACAGCAGTACTGTTGTTTCAAATGGTTGTAGGAGAGCTGGTTATTTTGGTAGATCAGAGCGACTTGGAGCTACTGCATCCTCTGCTACTTCTCGACAAATGCCTCATCCTACAACACCAACCGATCCCAATCCTTCTCTTTCGTTTTGTCCATCAAATATATACAGTAGTACTGGACGCGTACATAGCAATATGCCTGGTAGCCCCACGGAAGCTGACCCTTCAAGCTCTTTGGTGAACCGGGATGGTTTGAGTCACTACAACATGAATGGAATTGCAGAGGTATTGTTGGCCCTGGAAAGGATTGAACATGATGAAGAGCTTACATATGAGCAACTGGCTTCTATAGAGACCAATCTATTCTCAAGTGGTATGTTCAGATTCTATGATCAGCATAGAGATATGAGGCTTGACATCGATAACATGTCATATGAGGAGTTACTAGCTTTGGGGGATAAAATGGGTACAGTGAGCACAGCTCTAAGCGAAGAAGCACTCTCAAGAAGCCTTAAGCAAAGCATTTATCAGGAGACAGATGAAACCGGTTCCATCTCTCTGTATAAGGATGATGATATCAAGTGCAGTATTTGCCAGGAAGAGTATGTTGATGGAGATGAATTAGGGACTATTCCATGTCAACATATGTACCATGTGAGCTGTGTACAACAATGGCTGCGGATGAAGAATTGGTGCCCAATCTGCAAAACCTCTGCGGAAGAAGAGAAGTCGATTTAGTGAATAATGCCAACAGCAGTTTTAGCTTTGTGGGATGATTCCAAGATGATGCAGATACATTGCTATTTTCTTCACCAAGTGCTTGTCTCTACATCATCTTGCTCTCTCTTCTCTTTTCTTTTGTACATATAACAGTATCTTTCTTTTGACCTAATTGGGTACAAATGGGTAAATAAGATCAGGTGACCATTTTCTTCTCCTTCTGTATTAAAAGCTCGACTTTGATTTGAACCTGAAACATGTTTTGGTTTATACAAACAAATAC - >AT5G10650.1
CTCGGCAAAGGAAAAAAATAAAGGTAACGCCGGAAAGTTTTTTTTTTCTTCCCCTCTCTCTCGCAGCAGCTGACATGGTTTCTCTAAAATGATCTCGAGAAAGAAAAAAAAAAGTTGATATATTTGTTGTATCTGATTCTCTCTTGTTGTTTCTGTATTTGGATTGAAATTTTCAACTTTGGAAGATTTTTCTTCAATTTCACAGTTAGGGTTCGAATCCTGTTAACTTGTAGCTTGATCGGAAAAATTTTGAAGGGCAAAGTTTCTTTAATTGTCTCATCTCTCTGTTTAGATTTTGTTGTTGATGGCTTTGTTTCATGGTGAAGCTGGAATCGCGGAGAAAAGGGTTGTTGTTATGTTTATGGAAAGTCCGTGTAATTCGAATCAGACCCTTTCTTTTGGAACCATTAAAGTCACCTCCTTTCTCTCTCTCTCTTTTCGTTTCTTTTAACTAGTTTTTTGTTCATCTCTCTCTCTTATCTATCTACGATCACCGAATCATCAGCTTGATGTTTATGATACATCAAGTGTTTTGCTCTGGATGATTTATTATCTACATCCATGTTGTTACCGGAAAGTGTTTCTTTGATTCATGGATGGATGTGCTGGTAAACGATCTGTTGACCGGTTGGTTGTGCCTCGGAAAGCCAGTGGTCTTACCCTGCGTGAGAATATGAACAAGACAGATGGTAAGAATGTTCCTTTCTGCAGCCGAGTTGGTTGTACTGCAAAGGTAACTTCTACCAAGAGATCTCGGATTGGCTCTACGGATAACAATACAAAAGTTGGTCTGCCTCCGGTTCCATCTACCTTAAATAGAAAGGAAATTGTTGGGAGCTCATCTCGTACTCCTGGTGGATTTGGATACTTGAGAAAGCCAGCCAAAGTTACTGCAAGAAGACAGCCGTCATCTAGTTTAGACACTGAATCTTCGGAAACGAGTTGTATTCATGATGATCCAGCTGCAACAGAGCCCACACTTCCACGCCAAAAGACTAAAAGAGTCACAATCAATGTTCATCCTCAAAGCGCTGTCTCTAGAGAAGTTGTAATAACAAAGGCAGGAAGCTCAAGTAGAGGAACCAGCAGAATTAGTCATCCAAAGTCTGAATTGGGTACCCGCGATGCTCTGACGGGTCCTTCTGTTTCTACATCTTCTGGTAACAGTGAGCACACTGTAAGAGGCGGTTTGAGTAGGCATAGATTGAGGAACTTGAGCTGCAATTCTGTGTCTGATGTTCTTCCAACTAACTCAAACTCAGCAACAAAAATCAGTGTGACTAAAAAGAAAAACGCTGATGGAGAGAGCAGCTTATCTAGCAAAGGTAGTAAGACTAGTGTGTTGGTTCCAAAGGTAAGGAATCAAATTTCTTCTCATGGCAATGGCGTCACAGTTTCTGATAACAGAAGAAATCGAGTAGTACCAAGTATTAGGGACAGCAGTACTGTTGTTTCAAATGGTTGTAGGAGAGCTGGTTATTTTGGTAGATCAGAGCGACTTGGAGCTACTGCATCCTCTGCTACTTCTCGACAAATGCCTCATCCTACAACACCAACCGATCCCAATCCTTCTCTTTCGTTTTGTCCATCAAATATATACAGTAGTACTGGACGCGTACATAGCAATATGCCTGGTAGCCCCACGGAAGCTGACCCTTCAAGCTCTTTGGTGAACCGGGATGGTTTGAGTCACTACAACATGAATGGAATTGCAGAGGTATTGTTGGCCCTGGAAAGGATTGAACATGATGAAGAGCTTACATATGAGCAACTGGCTTCTATAGAGACCAATCTATTCTCAAGTGGTATGTTCAGATTCTATGATCAGCATAGAGATATGAGGCTTGACATCGATAACATGTCATATGAGGAGTTACTAGCTTTGGGGGATAAAATGGGTACAGTGAGCACAGCTCTAAGCGAAGAAGCACTCTCAAGAAGCCTTAAGCAAAGCATTTATCAGGAGACAGATGAAACCGGTTCCATCTCTCTGTATAAGGATGATGATATCAAGTGCAGTATTTGCCAGGAAGAGTATGTTGATGGAGATGAATTAGGGACTATTCCATGTCAACATATGTACCATGTGAGCTGTGTACAACAATGGCTGCGGATGAAGAATTGGTGCCCAATCTGCAAAACCTCTGCGGAAGAAGAGAAGTCGATTTAGTGAATAATGCCAACAGCAGTTTTAGCTTTGTGGGATGATTCCAAGATGATGCAGATACATTGCTATTTTCTTCACCAAGTGCTTGTCTCTACATCATCTTGCTCTCTCTTCTCTTTTCTTTTGTACATATAACAGTATCTTTCTTTTGACCTAATTGGGTACAAATGGGTAAATAAGATCAGGTGACCATTTTCTTCTCCTTCTGTATTAAAAGCTCGACTTTGATTTGAACCTGAAACATGTTTTGGTTTATACAAACAAATAC - >AT5G10650.3
CTCGGCAAAGGAAAAAAATAAAGGTAACGCCGGAAAGTTTTTTTTTTCTTCCCCTCTCTCTCGCAGCAGCTGACATGGTTTCTCTAAAATGATCTCGAGAAAGAAAAAAAAAAGTTGATATATTTGTTGTATCTGATTCTCTCTTGTTGTTTCTGTATTTGGATTGAAATTTTCAACTTTGGAAGATTTTTCTTCAATTTCACAGTTAGGGTTCGAATCCTGTTAACTTGTAGCTTGATCGGAAAAATTTTGAAGGGCAAAGTTTCTTTAATTGTCTCATCTCTCTGTTTAGATTTTGTTGTTGATGGCTTTGTTTCATGGTGAAGCTGGAATCGCGGAGAAAAGGGTTGTTGTTATGTTTATGGAAAGTCCGTGTAATTCGAATCAGACCCTTTCTTTTGGAACCATTAAAGTCACCTCCTTTCTCTCTCTCTCTTTTCGTTTCTTTTAACTAGTTTTTTGTTCATCTCTCTCTCTTATCTATCTACGATCACCGAATCATCAGCTTGATGTTTATGATACATCAAGTGTTTTGCTCTGGATGATTTATTATCTACATCCATGTTGTTACCGGAAAGTGTTTCTTTGATTCATGGATGGATGTGCTGGTAAACGATCTGTTGACCGGTTGGTTGTGCCTCGGAAAGCCAGTGGTCTTACCCTGCGTGAGAATATGAACAAGACAGATGGTAAGAATGTTCCTTTCTGCAGCCGAGTTGGTTGTACTGCAAAGGTAACTTCTACCAAGAGATCTCGGATTGGCTCTACGGATAACAATACAAAAGTTGGTCTGCCTCCGGTTCCATCTACCTTAAATAGAAAGGAAATTGTTGGGAGCTCATCTCGTACTCCTGGTGGATTTGGATACTTGAGAAAGCCAGCCAAAGTTACTGCAAGAAGACAGCCGTCATCTAGTTTAGACACTGAATCTTCGGAAACGAGTTGTATTCATGATGATCCAGCTGCAACAGAGCCCACACTTCCACGCCAAAAGACTAAAAGAGTCACAATCAATGTTCATCCTCAAAGCGCTGTCTCTAGAGAAGTTGTAATAACAAAGGCAGGAAGCTCAAGTAGAGGAACCAGCAGAATTAGTCATCCAAAGTCTGAATTGGGTACCCGCGATGCTCTGACGGGTCCTTCTGTTTCTACATCTTCTGGTAACAGTGAGCACACTGTAAGAGGCGGTTTGAGTAGGCATAGATTGAGGAACTTGAGCTGCAATTCTGTGTCTGATGTTCTTCCAACTAACTCAAACTCAGCAACAAAAATCAGTGTGACTAAAAAGAAAAACGCTGATGGAGAGAGCAGCTTATCTAGCAAAGGTAGTAAGACTAGTGTGTTGGTTCCAAAGGTAAGGAATCAAATTTCTTCTCATGGCAATGGCGTCACAGTTTCTGATAACAGAAGAAATCGAGTAGTACCAAGTATTAGGGACAGCAGTACTGTTGTTTCAAATGGTTGTAGGAGAGCTGGTTATTTTGGTAGATCAGAGCGACTTGGAGCTACTGCATCCTCTGCTACTTCTCGACAAATGCCTCATCCTACAACACCAACCGATCCCAATCCTTCTCTTTCGTTTTGTCCATCAAATATATACAGTAGTACTGGACGCGTACATAGCAATATGCCTGGTAGCCCCACGGAAGCTGACCCTTCAAGCTCTTTGGTGAACCGGGATGGTTTGAGTCACTACAACATGAATGGAATTGCAGAGGTATTGTTGGCCCTGGAAAGGATTGAACATGATGAAGAGCTTACATATGAGCAACTGGCTTCTATAGAGACCAATCTATTCTCAAGTGGTATGTTCAGATTCTATGATCAGCATAGAGATATGAGGCTTGACATCGATAACATGTCATATGAGGAGTTACTAGCTTTGGGGGATAAAATGGGTACAGTGAGCACAGCTCTAAGCGAAGAAGCACTCTCAAGAAGCCTTAAGCAAAGCATTTATCAGGAGACAGATGAAACCGGTTCCATCTCTCTGTATAAGGATGATGATATCAAGTGCAGTATTTGCCAGGAAGAGTATGTTGATGGAGATGAATTAGGGACTATTCCATGTCAACATATGTACCATGTGAGCTGTGTACAACAATGGCTGCGGATGAAGAATTGGTGCCCAATCTGCAAAACCTCTGCGGAAGAAGAGAAGTCGATTTAGTGAATAATGCCAACAGCAGTTTTAGCTTTGTGGGATGATTCCAAGATGATGCAGATACATTGCTATTTTCTTCACCAAGTGCTTGTCTCTACATCATCTTGCTCTCTCTTCTCTTTTCTTTTGTACATATAACAGTATCTTTCTTTTGACCTAATTGGGTACAAATGGGTAAATAAGATCAGGTGACCATTTTCTTCTCCTTCTGTATTAAAAGCTCGACTTTGATTTGAACCTGAAACATGTTTTGGTTTATACAAACAAATAC
CDS Sequence
Protein Sequence