Information report for AT5G10480
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0030148 — involved in — sphingolipid biosynthetic process
- GO:0042761 — involved in — very long-chain fatty acid biosynthetic process
- GO:0030154 — acts upstream of or within — cell differentiation
- GO:0005515 — enables — protein binding
- GO:0009923 — part of — fatty acid elongase complex
- GO:0042761 — acts upstream of or within — very long-chain fatty acid biosynthetic process
- GO:0005739 — located in — mitochondrion
- GO:0048640 — acts upstream of or within — negative regulation of developmental growth
- GO:0030497 — involved in — fatty acid elongation
- GO:0005829 — located in — cytosol
- GO:0005634 — located in — nucleus
- GO:0004725 — enables — protein tyrosine phosphatase activity
- GO:0050732 — acts upstream of or within — negative regulation of peptidyl-tyrosine phosphorylation
- GO:0018812 — enables — 3-hydroxyacyl-CoA dehydratase activity
- GO:0005783 — located in — endoplasmic reticulum
- GO:0051302 — acts upstream of or within — regulation of cell division
Functional Keywords
Literature and News
- The PASTICCINO genes of Arabidopsis thaliana are involved in the control of cell division and differentiation. DOI: 10.1242/dev.125.5.909 ; PMID: 9449673
- Mutation in the Arabidopsis PASTICCINO1 gene, which encodes a new FK506-binding protein-like protein, has a dramatic effect on plant development. DOI: 10.1128/MCB.18.5.3034 ; PMID: 9566922
- Pasticcino2 is a protein tyrosine phosphatase-like involved in cell proliferation and differentiation in Arabidopsis. DOI: 10.1046/j.1365-313x.2002.01456.x ; PMID: 12472687
- The Arabidopsis gene PEPINO/PASTICCINO2 is required for proliferation control of meristematic and non-meristematic cells and encodes a putative anti-phosphatase. DOI: 10.1007/s00427-002-0273-9 ; PMID: 12459923
- Hormonal control of cell proliferation requires PASTICCINO genes. DOI: 10.1104/pp.102.019026 ; PMID: 12857804
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Very-long-chain fatty acids are involved in polar auxin transport and developmental patterning in Arabidopsis. DOI: 10.1105/tpc.109.071209 ; PMID: 20145257
- A novel high-throughput in vivo molecular screen for shade avoidance mutants identifies a novel phyA mutation. DOI: 10.1093/jxb/err062 ; PMID: 21398429
- Very-long-chain fatty acids are required for cell plate formation during cytokinesis in Arabidopsis thaliana. DOI: 10.1242/jcs.074575 ; PMID: 21896643
- Acyl-lipid metabolism. DOI: 10.1199/tab.0161 ; PMID: 23505340
- The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis. DOI: 10.1371/journal.pgen.1005817 ; PMID: 26828932
- Correction: The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis. DOI: 10.1371/journal.pgen.1005958 ; PMID: 27011024
- Cuticular wax biosynthesis is positively regulated by WRINKLED4, an AP2/ERF-type transcription factor, in Arabidopsis stems. DOI: 10.1111/tpj.13248 ; PMID: 27337244
- Research progress on the autonomous flowering time pathway in Arabidopsis. DOI: 10.1007/s12298-017-0458-3 ; PMID: 28878488
- Differential impact of heat stress on the expression of chloroplast-encoded genes. DOI: 10.1016/j.plaphy.2018.05.023 ; PMID: 29852366
- Arabidopsis Bax inhibitor-1 interacts with enzymes related to very-long-chain fatty acid synthesis. DOI: 10.1007/s10265-018-01081-8 ; PMID: 30604175
- Genome-wide identification of EMBRYO-DEFECTIVE (EMB) genes required for growth and development in Arabidopsis. DOI: 10.1111/nph.16071 ; PMID: 31334862
- Protein-protein interactions in fatty acid elongase complexes are important for very-long-chain fatty acid synthesis. DOI: 10.1093/jxb/erab543 ; PMID: 35560210
- Tackling functional redundancy of Arabidopsis fatty acid elongase complexes. DOI: 10.3389/fpls.2023.1107333 ; PMID: 36798704
Gene Resources
- UniProt: F4KGW0
- EMBL: CP002688
- AlphaFoldDB: F4KGW0
- EnsemblPlants: AT5G10480.3
- Gramene: AT5G10480.3
- Orthologous matrix: WSYILWQ
- ExpressionAtlas: AT5G10480
- InterPro: IPR007482
- PANTHER: PTHR11035, PTHR11035:SF3
Sequences
cDNA Sequence
- >AT5G10480.3
GTAATTCATAAATGCTCCTCTCCTCCGATCTCTCCGCCATAAAATCTACTCTTTCTTCTTCTGGGTGTTCAAAGAATTAGTCGTTCTCGCGTATTCACTTTCCATGGCGGGCTTTCTCTCCGTTGTCCGGCGCGTGTACCTCACTCTCTACAATTGGATCGTCTTTGCTGGATGGGCTCAGGTTTTGTACTTAGCGATAACGACGTTGAAGGAAACGGGTTATGAGAATGTCTATGACGCCATTGAGAAGCCTCTCCAGCTTGCTCAGACTGCCGCCGTTCTCGAGATTCTTCATGGATTAGTAGGTTTGGTCAGATCTCCTGTTTCTGCAACTCTGCCACAGATAGGTTCAAGGCTATTTCTCACTTGGGGCATCCTATACAGTTTTCCAGAGGTCCGATCTCATTTTCTTGTTACGTCGCTGGTCATAAGCTGGTCTATCACAGAGTTTCCTATCACAACATGGATTGTTGAAATTATTCGCTACTCATTCTTCGGCTTTAAGGAAGCTCTAGGCTTTGCACCTTCATGGCACTTGTGGCTCAGATACAGCAGCTTTTTATTGCTATACCCTACCGGTATCACCAGCGAAGTTGGTCTTATCTACCTTGCCTTACCACACATCAAGACATCGGAGATGTACAGCGTTAGGATGCCTAACATATTGAACTTCTCATTTGACTTCTTCTATGCAACGATACTCGTCCTTGCAATCTATGTCCCAGGTAGCCCACACATGTACAGGTACATGCTTGGTCAGCGAAAGAGAGCTCTCTCCAAATCCAAGAGGGAATAAAAGAAAAGATTTAGAAAGAGACGAAAAAGCTCATCAACTGTTTTCTCCTCTTGTCTTGTTCGTTCATGTACTACTAGTCTACTACTACAACTTGTCTTTTGTTTAGCTTGTTTGAGCTTTTACTTCCTCGGCGATTACTTGAACTTACATGCAGCAGGATACTATTAAGTGTAATGTGGTTTCTAAATTAATAAGAAAATCATTGGTTCCTTCTCAGTAGAAATGAAAAAGTTGATTTAAG - >AT5G10480.1
GTAATTCATAAATGCTCCTCTCCTCCGATCTCTCCGCCATAAAATCTACTCTTTCTTCTTCTGGGTGTTCAAAGAATTAGTCGTTCTCGCGTATTCACTTTCCATGGCGGGCTTTCTCTCCGTTGTCCGGCGCGTGTACCTCACTCTCTACAATTGGATCGTCTTTGCTGGATGGGCTCAGGTTTTGTACTTAGCGATAACGACGTTGAAGGAAACGGGTTATGAGAATGTCTATGACGCCATTGAGAAGCCTCTCCAGCTTGCTCAGACTGCCGCCGTTCTCGAGATTCTTCATGGATTAGTAGGTTTGGTCAGATCTCCTGTTTCTGCAACTCTGCCACAGATAGGTTCAAGGCTATTTCTCACTTGGGGCATCCTATACAGTTTTCCAGAGGTCCGATCTCATTTTCTTGTTACGTCGCTGGTCATAAGCTGGTCTATCACAGAGTTTCCTATCACAACATGGATTGTTGAAATTATTCGCTACTCATTCTTCGGCTTTAAGGAAGCTCTAGGCTTTGCACCTTCATGGCACTTGTGGCTCAGATACAGCAGCTTTTTATTGCTATACCCTACCGGTATCACCAGCGAAGTTGGTCTTATCTACCTTGCCTTACCACACATCAAGACATCGGAGATGTACAGCGTTAGGATGCCTAACATATTGAACTTCTCATTTGACTTCTTCTATGCAACGATACTCGTCCTTGCAATCTATGTCCCAGGTAGCCCACACATGTACAGGTACATGCTTGGTCAGCGAAAGAGAGCTCTCTCCAAATCCAAGAGGGAATAAAAGAAAAGATTTAGAAAGAGACGAAAAAGCTCATCAACTGTTTTCTCCTCTTGTCTTGTTCGTTCATGTACTACTAGTCTACTACTACAACTTGTCTTTTGTTTAGCTTGTTTGAGCTTTTACTTCCTCGGCGATTACTTGAACTTACATGCAGCAGGATACTATTAAGTGTAATGTGGTTTCTAAATTAATAAGAAAATCATTGGTTCCTTCTCAGTAGAAATGAAAAAGTTGATTTAAG - >AT5G10480.2
GTAATTCATAAATGCTCCTCTCCTCCGATCTCTCCGCCATAAAATCTACTCTTTCTTCTTCTGGGTGTTCAAAGAATTAGTCGTTCTCGCGTATTCACTTTCCATGGCGGGCTTTCTCTCCGTTGTCCGGCGCGTGTACCTCACTCTCTACAATTGGATCGTCTTTGCTGGATGGGCTCAGGTTTTGTACTTAGCGATAACGACGTTGAAGGAAACGGGTTATGAGAATGTCTATGACGCCATTGAGAAGCCTCTCCAGCTTGCTCAGACTGCCGCCGTTCTCGAGATTCTTCATGGATTAGTAGGTTTGGTCAGATCTCCTGTTTCTGCAACTCTGCCACAGATAGGTTCAAGGCTATTTCTCACTTGGGGCATCCTATACAGTTTTCCAGAGGTCCGATCTCATTTTCTTGTTACGTCGCTGGTCATAAGCTGGTCTATCACAGAGTTTCCTATCACAACATGGATTGTTGAAATTATTCGCTACTCATTCTTCGGCTTTAAGGAAGCTCTAGGCTTTGCACCTTCATGGCACTTGTGGCTCAGATACAGCAGCTTTTTATTGCTATACCCTACCGGTATCACCAGCGAAGTTGGTCTTATCTACCTTGCCTTACCACACATCAAGACATCGGAGATGTACAGCGTTAGGATGCCTAACATATTGAACTTCTCATTTGACTTCTTCTATGCAACGATACTCGTCCTTGCAATCTATGTCCCAGGTAGCCCACACATGTACAGGTACATGCTTGGTCAGCGAAAGAGAGCTCTCTCCAAATCCAAGAGGGAATAAAAGAAAAGATTTAGAAAGAGACGAAAAAGCTCATCAACTGTTTTCTCCTCTTGTCTTGTTCGTTCATGTACTACTAGTCTACTACTACAACTTGTCTTTTGTTTAGCTTGTTTGAGCTTTTACTTCCTCGGCGATTACTTGAACTTACATGCAGCAGGATACTATTAAGTGTAATGTGGTTTCTAAATTAATAAGAAAATCATTGGTTCCTTCTCAGTAGAAATGAAAAAGTTGATTTAAG
CDS Sequence
Protein Sequence