Gene Details:
- Gene ID: AT5G10460
- Gene Symbol: HDF1
- Gene Name: HAD-FAMILY REGULATOR OF DEVELOPMENT AND FLOWERING 1
- Description: Haloacid dehalogenase-like hydrolase (HAD) superfamily protein;(source:Araport11)
- TAIR Accession: locus:2142454
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0008610 — acts upstream of or within — lipid biosynthetic process
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0005829 — located in — cytosol
- GO:0009416 — acts upstream of or within — response to light stimulus
- GO:0009507 — located in — chloroplast
- GO:0016791 — enables — phosphatase activity
Function-related keywords:
Literature:
- Phytochrome control of the Arabidopsis transcriptome anticipates seedling exposure to light. DOI: 10.1105/tpc.105.034322 ; PMID: 16024587
- Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes. DOI: 10.1186/1471-2164-9-113 ; PMID: 18315867
- An FMN hydrolase of the haloacid dehalogenase superfamily is active in plant chloroplasts. DOI: 10.1074/jbc.M111.260885 ; PMID: 22002057
- Identification and characterization of the missing phosphatase on the riboflavin biosynthesis pathway in Arabidopsis thaliana. DOI: 10.1111/tpj.13291 ; PMID: 27490826
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Sequences:
cDNA Sequence
- >AT5G10460.1
AACACTTTGTGGTTTGTTTTTCGATTGGTCCAGTTCTCTTCAGTTCTTCTTCTTCTCGTCACAGGAAGAAAAATGTTCTGTTCCTCGCAGCTCTCACAGCCAATGAATGGCCTCAAAGACATAGTTGAGACGAGAAATTTTAAGGCTTGGCTCTTAGATCAGTATGGAGTTCTTCATGATGGCAAAAAACCTTACCCCGGTGCTATCTCAACATTGAAAAATCTTGCAACAGCGGGTGCCAAAATTGTGATCATTAGTAATTCTTCTAGACGTGCTTCAACTACAATGGAAAAGTTGAAAGGCCTTGGCTTTGATCCTTCTTTCTTCACCGGAGCTATAACTAGTGGTGAACTAACTCATCAATCTTTGCAGAGGAGAGATGATCCTTGGTTTGCTGCACTGGGAAGGAGGTGCATTCACATTACTTGGAATGACCGAGGAGCAATCTCTTTGGAGGGTCTAGATCTAAATGTTGTGGAGAATGTGGAAGAAGCTGACTTTGTTTTAGCGCACGGCACTGAAGCCCTAGGACTTCCTTCAGGCAGTGTATCTCCAAGGACTATTGATGAGCTAGAGAAGATTTTGGAGAAATCTGCAGCTCGAGGACTTCCCATGATCGTAGCTAATCCAGATTACGTGACTGTTGAAGCAAATGTTTTTCATATCATGCCAGGTACACTAGCTTCCAAGTATGAAGAACTGGGAGGAGAAGTGAAGTCGATGGGAAAACCTCATAAGATGATCTATGAGTCTGCTATAGCAATTGCGGGAGTCAATCCGTCTGAGTCTATCGCAGTAGGAGATTCGCTACATCATGATATAAGGGGAGCAAATGTTTCAGGAATTGAATCAATATTCATCACTGGAGGGATTCATGGTAATGAGCTTGGTCTCACTTCTTTTGATGAAACTGCAAGTCTAGACTCAGTCAAGACCCTTACTGCTAAACACAATGCATTCCCAACTTATGTATTATCAGCCTTTAAATGGTAGTTTTCGTTTTGTTGTACAAATCATATTATTGCTTCTTGAACTACATTTTGCCTTCATTTAACACTCAGAGAGAGTAATTTAAAAAGCTCATTTGCTGAGAAAGT
CDS Sequence
Protein Sequence