Information report for AT5G10350
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- An Arabidopsis Fip1 homolog interacts with RNA and provides conceptual links with a number of other polyadenylation factor subunits. DOI: 10.1074/jbc.M510964200 ; PMID: 16282318
- BIGPETALp, a bHLH transcription factor is involved in the control of Arabidopsis petal size. DOI: 10.1038/sj.emboj.7601270 ; PMID: 16902407
- Arabidopsis mRNA polyadenylation machinery: comprehensive analysis of protein-protein interactions and gene expression profiling. DOI: 10.1186/1471-2164-9-220 ; PMID: 18479511
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Interactome analysis reveals versatile functions of Arabidopsis COLD SHOCK DOMAIN PROTEIN 3 in RNA processing within the nucleus and cytoplasm. DOI: 10.1007/s12192-012-0398-3 ; PMID: 23334891
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
Gene Resources
- UniProt: A0A1P8BBR0
- EMBL: CP002688
- AlphaFoldDB: A0A1P8BBR0
- EnsemblPlants: AT5G10350.3, AT5G10350.4, AT5G10350.5
- Gramene: AT5G10350.3, AT5G10350.4, AT5G10350.5
- ExpressionAtlas: AT5G10350
- InterPro: IPR000504, IPR012677, IPR035979
- PANTHER: PTHR23236, PTHR23236:SF102
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- SWISS-MODEL: A0A1P8BBR0
Sequences
cDNA Sequence
- >AT5G10350.6
CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT - >AT5G10350.5
CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT - >AT5G10350.2
CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT - >AT5G10350.3
CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT - >AT5G10350.4
CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT - >AT5G10350.1
CTCGATCAGTTTATGTTGGCAATGGTTGTTCTCATAAATGAAGTTCTTAATAGCTCTGGGTTCTCAACTAAGTTTTGTGACTGTTTTGCTAGTTTCCTTGTTGTAGTGTTAAAATCATTCTTCCCGTGCAATTTGATGATAAAAAAGCTATAAAAAAAATGTTGAAAGTAAAAAGAAAAGAGAAGGAAAAAAATTTGAAAAAAAAAAAAAAAGATATAGCAGAAAAATGTGGAGAAAAATATTGCATGAGCTTGAAAAAAAAAAGAAGGATTTCTTGAGAGGAAAAAGGGAGTCTGAGTGAGTTGGGTGGGATTAGAAAGCAAGGTTTCTGTTATCCTTGAGGAGATGGTCTCTGAACTCTGAAGAGCTGGATCAAGATGCCAAGATGCTGGATGCTTTCTAAACAAGACCCAAAGCTCCGCAGGGAGGATACTTGGAGCTAATACAGGTCGACTATGCCTGTACACCTGAAGAAGTGCAACTACATTTCCAAACATGCGGAACAGTCAACCGGGTAACCATTCTAATGGACAAGTTTGGACAGCCAAAGGGATTTGCTTATGTGGAGTTTGTAGAAGTGGAAGCCGTGCAAGAAGCTCTGCAGCTGAATGAATCAGAGCTTCATGGTCGTCAACTGAAGGTCTCGCCTAAGCGAACCAATGTTCCTGGAATGAAACAGTATCATCCTGGGCGTTTCAACCCTTCAATGGGATACCGCTTTCGCAGACCCTTTGTGCCTCCGTATTTTTATTCCCCATATGGATACGGGAAGGCTCCTAGGTTCAGAAGGCCAATGCGGTACATGCCTTACCAATAGAAACCGTACCGGAATAAGAAGAACTATGACAGAGATGATGCCGAGGTCGTCCCTCCATTTCGAGCTTTATATATGAATATGACTTTGCTCGCACCTGAACTTAATTTTGAATCTGTCATGTACGGATGAGATTATAAGCTTTTGTTTCTTTAGATTATGATTATATTTGGTCGATATTACTTTCAGTTTATATCTTTGTTAGTACTTTCTTTCATCCAAAGGGGGCTAAATAAGTATACCAACAAGAAGATTGATGTTACGTAGAGAAGCCTTTGTAAGAAGCTATTATGTTTCCGCAAAAAATCCCTTAGTCAGAAGCTAACCTTTACTAATCAATGATGTATGGTATAATCAAATCCCTTATTCCTT
CDS Sequence
Protein Sequence