Information report for AT5G10280
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0010345 — acts upstream of or within — suberin biosynthetic process
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0000987 — enables — cis-regulatory region sequence-specific DNA binding
- GO:0045723 — acts upstream of or within — positive regulation of fatty acid biosynthetic process
- GO:0000976 — enables — transcription cis-regulatory region binding
- GO:0005515 — enables — protein binding
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Towards functional characterisation of the members of the R2R3-MYB gene family from Arabidopsis thaliana. DOI: 10.1046/j.1365-313x.1998.00278.x ; PMID: 9839469
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- The R2R3-MYB gene family in Arabidopsis thaliana. DOI: 10.1016/s1369-5266(00)00199-0 ; PMID: 11597504
- Genomic evidence for COP1 as a repressor of light-regulated gene expression and development in Arabidopsis. DOI: 10.1105/tpc.004416 ; PMID: 12368493
- Transcriptome analysis of sulfur depletion in Arabidopsis thaliana: interlacing of biosynthetic pathways provides response specificity. DOI: 10.1046/j.1365-313x.2003.01657.x ; PMID: 12609038
- Comparison of lignin deposition in three ectopic lignification mutants. DOI: 10.1111/j.1469-8137.2005.01496.x ; PMID: 16159327
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- AtMYB93 is a novel negative regulator of lateral root development in Arabidopsis. DOI: 10.1111/nph.12879 ; PMID: 24902892
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- AtMYB92 enhances fatty acid synthesis and suberin deposition in leaves of Nicotiana benthamiana. DOI: 10.1111/tpj.14759 ; PMID: 32246506
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis. DOI: 10.1093/molbev/msj051 ; PMID: 16280546
- The MYB transcription factor superfamily of Arabidopsis: expression analysis and phylogenetic comparison with the rice MYB family. DOI: 10.1007/s11103-005-2910-y ; PMID: 16463103
Gene Resources
- UniProt: A0A178UPI6
- EMBL: CACRSJ010000110, LUHQ01000005
- AlphaFoldDB: A0A178UPI6
- EnsemblPlants: AT5G10280.1
- Gramene: AT5G10280.1
- KEGG: ath:AT5G10280
- Orthologous matrix: IDQEHTI
- ExpressionAtlas: AT5G10280
- InterPro: IPR001005, IPR009057, IPR015495
- PANTHER: PTHR47994, PTHR47994:SF5
- SUPFAM: SSF46689
- PROSITE: PS50090, PS51294
- Gene3D: 1.10.10.60
- SWISS-MODEL: A0A178UPI6
- Conserved Domain Database: cd00167
Sequences
cDNA Sequence
- >AT5G10280.1
GGAAAGAAGCACGTGGTGAATGGACATGAAGAGAAAAGGATGCTAGGTTTAATATAAATTGGAATAAGAAGCAGTTAGTGGTTGTGAAGGAAGGAAGGAGGCAAGCAACCAAATCTCAGAGACAATTATAACAGTATAGAGAAGGAAGAAAGAAAAGAAAAAGAAACCGTTGTTGATTTAGATACAGAGAAGAGAAGATCATCTAACATGGGAAGATCTCCTATCTCTGATGACTCTGGTCTCAAGAAAGGTCCTTGGACTCCTGATGAAGATGAGAAACTTGTCAACTATGTTCAAAAACATGGTCATAGTAGCTGGAGAGCCCTTCCCAAACTCGCTGGTCTTAACAGGTGTGGGAAGAGTTGCAGGCTAAGATGGACGAACTACTTGAGACCAGACATCAAGAGAGGGAGATTCTCTCCGGACGAGGAACAGACTATCTTGAATCTTCATTCAGTTCTTGGAAACAAGTGGTCAACGATTGCGAATCAGTTACCAGGGAGAACAGATAACGAGATCAAGAATTTCTGGAACACTCATTTGAAGAAGAAGCTGATTCAGATGGGTTTTGATCCAATGACTCACCGTCCAAGAACCGATATCTTCTCCGGCTTATCTCAGCTCATGTCTTTGTCTTCTAACCTGAGAGGCTTTGTTGATCTGCAACAACAGTTTCCTATTGATCAAGAACACACTATACTCAAACTCCAAACCGAGATGGCCAAACTCCAATTGTTCCAATACCTTCTTCAACCGTCTTCCATGAGTAACAATGTTAACCCTAATGACTTTGACACTCTCAGTCTCCTTAACTCTATTGCCTCTTTCAAAGAGACCAGTAATAATACCACCAGCAACAATCTCGACCTCGGTTTCCTCGGCTCTTATCTTCAGGACTTCCACAGCTTACCTTCCCTGAAAACCCTAAATTCCAACATGGAACCATCATCTGTTTTCCCCCAGAATCTTGATGACAATCACTTCAAATTCTCCACTCAAAGAGAAAACCTACCCGTGTCTCCAATCTGGCTCTCGGATCCATCCAGCACAACTCCTGCTCATGTGAATGATGATCTGATTTTTAACCAATACGGTATTGAAGATGTCAATAGCAATATCACATCTTCAAGCGGTCAAGAATCAGGAGCTTCAGCTTCAGCTGCATGGCCTGATCATCTATTGGATGATTCTATATTTTCCGACATTCCTTAGCCTTCTTTTGTCTTTACTTTCAGGTATGTACTTTGGAGGAACTCAAATCAAATTTACTCTTGGAATTGTGCTTGTTGGAGATTTTTATTTGCCTATCTATATATATATAAATACTGTAGAGACATCATATATTTGTAACTCATGTTGTAGAATGTACAGTACAGAGATTTCATACTCATATGCATATGTTGTTGTCAATGTTCTTTAGCATATGTCTCTGTGCACAGAGTTTATATATATATAAGATTTTTGTGAAATGGATATCATTTGTAGTTGTAGTTGTAGTTGTATGGTATTTAATAATTAGGGTTTTTGCTGATT
CDS Sequence
Protein Sequence