Information report for AT5G10270
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0005634 — is active in — nucleus
- GO:0032968 — involved in — positive regulation of transcription elongation by RNA polymerase II
- GO:0009615 — acts upstream of or within — response to virus
- GO:0006468 — involved in — protein phosphorylation
- GO:0048366 — acts upstream of or within — leaf development
- GO:0005515 — enables — protein binding
- GO:0008353 — enables — RNA polymerase II CTD heptapeptide repeat kinase activity
- GO:0016301 — enables — kinase activity
- GO:0000307 — part of — cyclin-dependent protein kinase holoenzyme complex
- GO:0005634 — located in — nucleus
Functional Keywords
Literature and News
- Genome-wide analysis of core cell cycle genes in Arabidopsis. DOI: 10.1105/tpc.010445 ; PMID: 11971144
- Use of serial analysis of gene expression technology to reveal changes in gene expression in Arabidopsis pollen undergoing cold stress. DOI: 10.1104/pp.103.020511 ; PMID: 12805584
- Gene family analysis of the Arabidopsis pollen transcriptome reveals biological implications for cell growth, division control, and gene expression regulation. DOI: 10.1104/pp.104.057935 ; PMID: 15908605
- A transcriptome-based characterization of habituation in plant tissue culture. DOI: 10.1104/pp.105.076059 ; PMID: 16489130
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Transcriptome analysis of proliferating Arabidopsis endosperm reveals biological implications for the control of syncytial division, cytokinin signaling, and gene expression regulation. DOI: 10.1104/pp.108.128108 ; PMID: 18923020
- In silico comparison of transcript abundances during Arabidopsis thaliana and Glycine max resistance to Fusarium virguliforme. DOI: 10.1186/1471-2164-9-S2-S6 ; PMID: 18831797
- Autophosphorylation profiling of Arabidopsis protein kinases using the cell-free system. DOI: 10.1016/j.phytochem.2011.02.029 ; PMID: 21477822
- Comparative Analysis of CDPK Family in Maize, Arabidopsis, Rice, and Sorghum Revealed Potential Targets for Drought Tolerance Improvement. DOI: 10.3389/fchem.2017.00115 ; PMID: 29312925
- Global analysis of the core cell cycle regulators of Arabidopsis identifies novel genes, reveals multiple and highly specific profiles of expression and provides a coherent model for plant cell cycle control. DOI: 10.1111/j.1365-313X.2004.02319.x ; PMID: 15686519
- Roles of Arabidopsis cyclin-dependent kinase C complexes in cauliflower mosaic virus infection, plant growth, and development. DOI: 10.1105/tpc.107.051375 ; PMID: 17468259
- Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis. DOI: 10.1021/pr8000173 ; PMID: 18433157
- Comparative Analysis of CDPK Family in Maize, Arabidopsis, Rice, and Sorghum Revealed Potential Targets for Drought Tolerance Improvement. DOI: 10.3389/fchem.2017.00115 ; PMID: 29312925
Gene Resources
- UniProt: A0A178UJP9
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UJP9
- EnsemblPlants: AT5G10270.1
- Gramene: AT5G10270.1
- KEGG: ath:AT5G10270
- Orthologous matrix: YTQGGQY
- ExpressionAtlas: AT5G10270
- InterPro: IPR000719, IPR008271, IPR011009
- PANTHER: PTHR24056, PTHR24056:SF546
- SUPFAM: SSF56112
- PROSITE: PS00107, PS00108, PS50011
- Gene3D: 1.10.510.10, 3.30.200.20
- OrthoDB: A0A178UJP9
- SWISS-MODEL: A0A178UJP9
- Conserved Domain Database: cd07840
Sequences
cDNA Sequence
- >AT5G10270.1
GGGAAACCTACGGAGAGAGAGTTGTCTGAGAGAAAAGGAAAGCGATCGAGAAAGACGTAATTTGATCATCGGAGTAAAAGATATTGTTCGACAGTGGGACTCCCGGGAACGAAGATGGCGATGGCATCATTCGGGCAGCTAAATCTCGAGGAACCTCCTCCAATCTGGGGATCTCGCAGCGTTGATTGCTTTGAGAAGCTCGAACAAATTGGTGAAGGCACTTACGGTCAAGTTTACATGGCTAAAGAAATCAAAACTGGTGAAATTGTGGCTCTCAAAAAGATACGTATGGACAATGAAAGAGAAGGGTTTCCTATAACAGCTATTAGAGAGATAAAGATTCTGAAGAAGCTTCATCATGAAAATGTCATTCAGCTGAAAGAGATTGTGACTTCACCAGGTCGGGACAGGGATGACCAAGGAAAGCCAGATAATAACAAATACAAGGGTGGCATCTACATGGTTTTTGAGTACATGGATCATGATTTGACTGGACTAGCAGATCGTCCTGGACTGAGATTTACTGTTCCTCAAATTAAGTGTTACATGAAGCAATTGCTTACCGGGCTTCACTATTGTCATGTGAATCAAGTGCTTCACCGTGATATAAAAGGCTCAAATCTCCTTATCGACAATGAGGGAAATTTAAAGCTGGCTGATTTTGGGCTTGCACGGTCGTATTCTCATGATCATACTGGAAATCTTACAAATCGTGTCATCACATTGTGGTATAGGCCCCCTGAATTACTACTTGGGGCTACAAAATATGGCCCAGCAATTGACATGTGGTCGGTTGGTTGCATATTTGCCGAACTTTTGCATGCAAAACCAATCTTACCTGGGAAAAATGAGCAAGAACAATTGAACAAGATATTTGAGCTTTGTGGATCACCTGATGAAAAACTTTGGCCTGGGGTTTCCAAGATGCCTTGGTTCAACAATTTCAAGCCTGCACGGCCCTTGAAGAGGCGTGTAAGAGAGTTCTTCAGACACTTTGATCGGCATGCTCTTGAATTACTGGAGAAAATGTTGGTGCTTGATCCAGCACAGAGAATATCGGCAAAGGATGCTCTTGATGCCGAGTACTTTTGGACTGATCCGTTGCCATGTGACCCAAAGAGTCTGCCCACATATGAATCATCACATGAGTTCCAGACAAAGAAAAAGCGGCAACAGCAGCGCCAAAACGAGGAAGCAGCAAAAAGACAGAAACTGCAGCATCCACCGCTGCAGCACTCTCGCTTACCCCCATTACAACATGGTGGACAGTCTCATGCTGCTCCACATTGGCCTGCAGGTCCAAACCATCCCACTAACAACGCACCACCACAAGTACCTGCTGGACCCAGCCACAACTTCTATGGGAAGCCGCGTGGTCCACCTGGTCCAAACCGCTACCCTCCTAGCGGAAACCAGAGCGGGGGTTATAATCAAAGCCGAGGAGGTTACAGCAGTGGATCATATCCTCCACAAGGACGTGGAGCTCCTTATGTGGCTGGTCCTAGAGGGCCTAGTGGTGGCCCGTACGGGGTTGGACCTCCTAACTACACACAAGGTGGTCAGTATGGTGGCTCTGGTAGCTCGGGAAGAGGGCAGAATCAGAGAAACCAGCAATACGGATGGCAACAGTAAAGAGCTCTAATGATTTGTTGATCTGATATCTTACTCTTACATTTAATGTGATACTAGTAATAAACTAATAATAGATTAATATGAGAAACTGAATCTCTTTCTTTTCCCAATTCTTTCCAAGTCTTATTTCGTTATCCAAACATTTTCTAGTAATGTCAAGATGGAGACTGACAGTGTGTGATGTAAAAGAAATGAGCAATGAGAACAGAGCAAAACATGCCA
CDS Sequence
Protein Sequence