AT5G10140

Information report for AT5G10140

Gene Details

Gene ID: AT5G10140
Gene Symbol: AGL25, FLC, FLF, RSB6
Gene Name: AGAMOUS-like 25, FLOWERING LOCUS C, FLOWERING LOCUS F, REDUCED STEM BRANCHING 6
Description: K-box region and MADS-box transcription factor family protein;(source:Araport11)
TAIR Accession: locus:2184118
Genome: Araport11_genome_release
Species: Arabidopsis thaliana

Functional Descriptions

PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
PO:0009013 — portion of meristem tissue — meristem (exact), meristema (Spanish, exact), meristematic tissue (exact), 分裂組織 (Japanese, exact)
PO:0000025 — root tip — punta de la raíz (Spanish, exact), 根端 (Japanese, exact)
PO:0000037 — shoot axis apex — ápice del epiblasto (epiblastema) (Spanish, exact), シュート頂、茎頂 (Japanese, exact)
PO:0009010 — seed — semilla (Spanish, exact), 種子 (Japanese, exact), pyrene (narrow), diaspore (broad)

GO:2000028 — involved in — regulation of photoperiodism, flowering
GO:0000976 — enables — transcription cis-regulatory region binding
GO:0003700 — enables — DNA-binding transcription factor activity
GO:0005634 — located in — nucleus
GO:0045944 — involved in — positive regulation of transcription by RNA polymerase II
GO:0005515 — enables — protein binding
GO:0000977 — enables — RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0010048 — acts upstream of or within — vernalization response
GO:0000978 — enables — RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0006357 — involved in — regulation of transcription by RNA polymerase II
GO:0009910 — acts upstream of or within — negative regulation of flower development
GO:0009910 — involved in — negative regulation of flower development
GO:0000981 — enables — DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0042752 — acts upstream of or within — regulation of circadian rhythm
GO:0046983 — enables — protein dimerization activity
GO:0009266 — acts upstream of or within — response to temperature stimulus
GO:0032991 — part of — protein-containing complex
GO:0009266 — involved in — response to temperature stimulus

CS1122 — variation in flowering time, height = 40-45 cm.
CS1123 — variation in flowering time, height = 40-45 cm.
CS189 — not late flowering alone; when combined with FRI or ld, confers extreme late flowering and strong response to vernalization.
CS2110009 — impaired in several environmental pathways and possesses severely reduced flowering responses to changes in photoperiod and ambient temperature
CS22574 — After 12 wk vernalization FLC levels increased after 30 d growth post-cold.
CS22574 — After 6 wk of cold, FLC levels were lower than those observed at 4 wk.
CS22574 — After 6 wk vernalization, Lov-1 flowered earlier than Ull-2-5, suggesting that Lov-1 might be insensitive to short periods of cold but then respond quickly after that.
CS22574 — FLC levels decreased during cold treatment but then increased significantly after the plants were returned to 23°C.
CS22574 — Medium to large size of rosettes with numerous leaves, early leaves have leaf margins irregularly serrated, later leaves have leaf margins almost smooth, late flowering (vernalization at rosette stage may promote earlier flowering), dark-green plants with numerous aerial rosettes, height=56-66 cm.
CS22574 — While FLC decreased in Lov-1 plants over a 4-wk cold period, flowering time was not accelerated.
CS22579 — Accelerated flowering by 2 weeks vernalization. Flowering time variation between accessions was maximal after 4 wk vernalization.
CS22579 — After 6 wk of cold, FLC levels were lower than those observed at 4 wk.
CS22579 — FLC levels return to a moderately high level after 4 wk vernalization.
CS22579 — Large rosettes with numerous oval-shape leaves, elongated petiols, asymmetric and contorted leaf surfaces, leaf margins smooth, late flowering (vernalization at rosette stage may promote earlier flowering), dark-green plants, height=50-60 cm.
CS22581 — After 6 wk of cold, FLC levels were lower than those observed at 4 wk.
CS22581 — Despite responding to 4 wk of cold, Var-2-6 and Ull-2-5 still flowered late after >6 wk of cold; i.e., the vernalization response was relatively slow.
CS22581 — Large rosettes with numerous large leaves, leaves with rounded tips, leaf margins irregularly serrated, late flowering (vernalization at rosette stage may promote earlier flowering), dull greyish dark-green plants (slightly more pubescent than normal), height=45-55cm.
CS22586 — After 4 wk vernalization, FLC levels had increased (by 30 d after transfer to 23°C) to the same level as nonvernalized plants.
CS22586 — After 6 wk of cold, FLC levels were lower than those observed at 4 wk.
CS22586 — Despite responding to 4 wk of cold, Var-2-6 and Ull-2-5 still flowered late after >6 wk of cold; i.e., the vernalization response was relatively slow.
CS22586 — FLC levels decreased during cold treatment but then increased significantly after the plants were returned to 23°C.
CS22586 — Flowered extremely late after 8 wk vernalization and required at least 14 wk of cold to fully saturate the vernalization requirement.
CS22586 — Large rosettes with numerous leaves, leaf margins serrated, late flowering (vernalization at rosette stage may promote earlier flowering), dark -green plants, height= 42-48 cm.
CS22586 — Plants did flower after 4 wk vernalization but considerably later than H51.
CS22657 — Large rosettes with numerous leaves, elongated leaves with narrow appearance, leaf margins slightly serrated, late flowering (vernalization at rosette stage may promote earlier flowering), height = 40-50 cm.
CS6688 — Accelerated flowering by 2 weeks vernalization. Flowering time variation between accessions was maximal after 4 wk vernalization.
CS6688 — After 4 wk vernalization, the repression of FLC expression was maintained.
CS6688 — After 6 wk of cold, FLC levels were lower than those observed at 4 wk.
CS6688 — variation in flowering time, height = 40-45 cm.
H51 — Accelerated flowering by 2 weeks vernalization. Flowering time variation between accessions was maximal after 4 wk vernalization.
H51 — After 4 wk vernalization, the repression of FLC expression was maintained.
H51 — After 6 wk of cold, FLC levels were lower than those observed at 4 wk.
SALK_131491 — increased FLC mRNA, late flowering
SALK_140021 — reduced FLC mRNA, early flowering
agl19-1 flc-6 — The double mutant responded less to vernalization than either single mutant.
agl20-101D FRI-Sf2 flc-3 — Extreme acceleration of flowering time.
ath1-1 flc-7 — No additive effect on flowering time.
flc-1 — Early flowering.
flc-2 (FRI-Sf2) — Wild-type phenotype restored.
flc-3 — early flowering in short days
flc-3 agl24-2 — Late flowering in both long- and short-day growth conditions but retain a normal response to photoperiod compared to wild type.
flc-4 (FRI-Sf2) — Wild-type phenotype restored.
flc-5 (FRI-Sf2) — Wild-type phenotype restored.
flc-8 — Early flowering.
hlp1-1/flc-3 — Normal flowering response under long and short days. Loss of flc supresses the phenotype of hlp1-1
ldl1-2/ldl2/flc-3 — Late flowering. Flowers later than flc3 single mutant but earlier than ldl1/ldl2 double mutant.
p5cs1 p5cs2/P5CS2 flc-8 — Flowering time same as flc-8 single mutant.
suf4 flc-3 — Flowering time similar to that of the flc-3 single mutant in both LD and SD conditions.

Functional Keywords

Literature and News

Gene Resources

Sequences

cDNA Sequence

>AT5G10140.1
CGAGAAAAGGAAAAAAAAAAATAGAAAGAGAAAACGCTTAGTATCTCCGGCGACTTGAACCCAAACCTGAGGATCAAATTAGGGCACAAAGCCCTCTCGGAGAGAAGCCATGGGAAGAAAAAAACTAGAAATCAAGCGAATTGAGAACAAAAGTAGCCGACAAGTCACCTTCTCCAAACGTCGCAACGGTCTCATCGAGAAAGCTCGTCAGCTTTCTGTTCTCTGTGACGCATCCGTCGCTCTTCTCGTCGTCTCCGCCTCCGGCAAGCTCTACAGCTTCTCCTCCGGCGATAACCTGGTCAAGATCCTTGATCGATATGGGAAACAGCATGCTGATGATCTTAAAGCCTTGGATCATCAGTCAAAAGCTCTGAACTATGGTTCACACTATGAGCTACTTGAACTTGTGGATAGCAAGCTTGTGGGATCAAATGTCAAAAATGTGAGTATCGATGCTCTTGTTCAACTGGAGGAACACCTTGAGACTGCCCTCTCCGTGACTAGAGCCAAGAAGACCGAACTCATGTTGAAGCTTGTTGAGAATCTTAAAGAAAAGGAGAAAATGCTGAAAGAAGAGAACCAGGTTTTGGCTAGCCAGATGGAGAATAATCATCATGTGGGAGCAGAAGCTGAGATGGAGATGTCACCTGCTGGACAAATCTCCGACAATCTTCCGGTGACTCTCCCACTACTTAATTAGCCACCTTAAATCGGCGGTTGAAATCAAAATCCAAAACATATATAATTATGAAGAAAAAAAAAATAAGATATGTAATTATTCCGCTGATAAGGGCGAGCGTTTGTATATCTTAATACTCTCTCTTTGGCCAAGAGACTTTGTGTGTGATACTTAAGTAGACGGAACTAAGTCAATACTATCTGTTTTAAGACAAAAGGTTGATGAACTTTGTACCTTATTCGTGTGAGAATTGCATCGAGATCTTGAGTGTATGTGTTCTTCACTTCTGTCAAAAACTTGTGTTTGCTTCACAGTGAAGAAGCCTACGGCTTATTTTGCAACAGGGACGTGGCTCTCTCTCTC
>AT5G10140.2
CGAGAAAAGGAAAAAAAAAAATAGAAAGAGAAAACGCTTAGTATCTCCGGCGACTTGAACCCAAACCTGAGGATCAAATTAGGGCACAAAGCCCTCTCGGAGAGAAGCCATGGGAAGAAAAAAACTAGAAATCAAGCGAATTGAGAACAAAAGTAGCCGACAAGTCACCTTCTCCAAACGTCGCAACGGTCTCATCGAGAAAGCTCGTCAGCTTTCTGTTCTCTGTGACGCATCCGTCGCTCTTCTCGTCGTCTCCGCCTCCGGCAAGCTCTACAGCTTCTCCTCCGGCGATAACCTGGTCAAGATCCTTGATCGATATGGGAAACAGCATGCTGATGATCTTAAAGCCTTGGATCATCAGTCAAAAGCTCTGAACTATGGTTCACACTATGAGCTACTTGAACTTGTGGATAGCAAGCTTGTGGGATCAAATGTCAAAAATGTGAGTATCGATGCTCTTGTTCAACTGGAGGAACACCTTGAGACTGCCCTCTCCGTGACTAGAGCCAAGAAGACCGAACTCATGTTGAAGCTTGTTGAGAATCTTAAAGAAAAGGAGAAAATGCTGAAAGAAGAGAACCAGGTTTTGGCTAGCCAGATGGAGAATAATCATCATGTGGGAGCAGAAGCTGAGATGGAGATGTCACCTGCTGGACAAATCTCCGACAATCTTCCGGTGACTCTCCCACTACTTAATTAGCCACCTTAAATCGGCGGTTGAAATCAAAATCCAAAACATATATAATTATGAAGAAAAAAAAAATAAGATATGTAATTATTCCGCTGATAAGGGCGAGCGTTTGTATATCTTAATACTCTCTCTTTGGCCAAGAGACTTTGTGTGTGATACTTAAGTAGACGGAACTAAGTCAATACTATCTGTTTTAAGACAAAAGGTTGATGAACTTTGTACCTTATTCGTGTGAGAATTGCATCGAGATCTTGAGTGTATGTGTTCTTCACTTCTGTCAAAAACTTGTGTTTGCTTCACAGTGAAGAAGCCTACGGCTTATTTTGCAACAGGGACGTGGCTCTCTCTCTC
>AT5G10140.4
CGAGAAAAGGAAAAAAAAAAATAGAAAGAGAAAACGCTTAGTATCTCCGGCGACTTGAACCCAAACCTGAGGATCAAATTAGGGCACAAAGCCCTCTCGGAGAGAAGCCATGGGAAGAAAAAAACTAGAAATCAAGCGAATTGAGAACAAAAGTAGCCGACAAGTCACCTTCTCCAAACGTCGCAACGGTCTCATCGAGAAAGCTCGTCAGCTTTCTGTTCTCTGTGACGCATCCGTCGCTCTTCTCGTCGTCTCCGCCTCCGGCAAGCTCTACAGCTTCTCCTCCGGCGATAACCTGGTCAAGATCCTTGATCGATATGGGAAACAGCATGCTGATGATCTTAAAGCCTTGGATCATCAGTCAAAAGCTCTGAACTATGGTTCACACTATGAGCTACTTGAACTTGTGGATAGCAAGCTTGTGGGATCAAATGTCAAAAATGTGAGTATCGATGCTCTTGTTCAACTGGAGGAACACCTTGAGACTGCCCTCTCCGTGACTAGAGCCAAGAAGACCGAACTCATGTTGAAGCTTGTTGAGAATCTTAAAGAAAAGGAGAAAATGCTGAAAGAAGAGAACCAGGTTTTGGCTAGCCAGATGGAGAATAATCATCATGTGGGAGCAGAAGCTGAGATGGAGATGTCACCTGCTGGACAAATCTCCGACAATCTTCCGGTGACTCTCCCACTACTTAATTAGCCACCTTAAATCGGCGGTTGAAATCAAAATCCAAAACATATATAATTATGAAGAAAAAAAAAATAAGATATGTAATTATTCCGCTGATAAGGGCGAGCGTTTGTATATCTTAATACTCTCTCTTTGGCCAAGAGACTTTGTGTGTGATACTTAAGTAGACGGAACTAAGTCAATACTATCTGTTTTAAGACAAAAGGTTGATGAACTTTGTACCTTATTCGTGTGAGAATTGCATCGAGATCTTGAGTGTATGTGTTCTTCACTTCTGTCAAAAACTTGTGTTTGCTTCACAGTGAAGAAGCCTACGGCTTATTTTGCAACAGGGACGTGGCTCTCTCTCTC
>AT5G10140.3
CGAGAAAAGGAAAAAAAAAAATAGAAAGAGAAAACGCTTAGTATCTCCGGCGACTTGAACCCAAACCTGAGGATCAAATTAGGGCACAAAGCCCTCTCGGAGAGAAGCCATGGGAAGAAAAAAACTAGAAATCAAGCGAATTGAGAACAAAAGTAGCCGACAAGTCACCTTCTCCAAACGTCGCAACGGTCTCATCGAGAAAGCTCGTCAGCTTTCTGTTCTCTGTGACGCATCCGTCGCTCTTCTCGTCGTCTCCGCCTCCGGCAAGCTCTACAGCTTCTCCTCCGGCGATAACCTGGTCAAGATCCTTGATCGATATGGGAAACAGCATGCTGATGATCTTAAAGCCTTGGATCATCAGTCAAAAGCTCTGAACTATGGTTCACACTATGAGCTACTTGAACTTGTGGATAGCAAGCTTGTGGGATCAAATGTCAAAAATGTGAGTATCGATGCTCTTGTTCAACTGGAGGAACACCTTGAGACTGCCCTCTCCGTGACTAGAGCCAAGAAGACCGAACTCATGTTGAAGCTTGTTGAGAATCTTAAAGAAAAGGAGAAAATGCTGAAAGAAGAGAACCAGGTTTTGGCTAGCCAGATGGAGAATAATCATCATGTGGGAGCAGAAGCTGAGATGGAGATGTCACCTGCTGGACAAATCTCCGACAATCTTCCGGTGACTCTCCCACTACTTAATTAGCCACCTTAAATCGGCGGTTGAAATCAAAATCCAAAACATATATAATTATGAAGAAAAAAAAAATAAGATATGTAATTATTCCGCTGATAAGGGCGAGCGTTTGTATATCTTAATACTCTCTCTTTGGCCAAGAGACTTTGTGTGTGATACTTAAGTAGACGGAACTAAGTCAATACTATCTGTTTTAAGACAAAAGGTTGATGAACTTTGTACCTTATTCGTGTGAGAATTGCATCGAGATCTTGAGTGTATGTGTTCTTCACTTCTGTCAAAAACTTGTGTTTGCTTCACAGTGAAGAAGCCTACGGCTTATTTTGCAACAGGGACGTGGCTCTCTCTCTC

CDS Sequence

Protein Sequence