Gene Details:
- Gene ID: AT5G09920
- Gene Symbol: ATRPB15.9, NRPB4, RPB15.9, RPB15.9.9
- Gene Name:
- Description: RNA polymerase II, Rpb4, core protein;(source:Araport11)
- TAIR Accession: locus:2178158
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0034402 — involved in — recruitment of 3-end processing factors to RNA polymerase II holoenzyme complex
- GO:0005665 — part of — RNA polymerase II, core complex
- GO:0006366 — acts upstream of or within — transcription by RNA polymerase II
- GO:0006367 — involved in — transcription initiation at RNA polymerase II promoter
- GO:0000166 — enables — nucleotide binding
Function-related keywords:
Literature:
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Subunit compositions of the RNA-silencing enzymes Pol IV and Pol V reveal their origins as specialized forms of RNA polymerase II. DOI: 10.1016/j.molcel.2008.12.015 ; PMID: 19110459
Sequences:
cDNA Sequence
- >AT5G09920.1
ATATTCATCACTTTCGTTGTTAAGACGGAAAAAAAAAAAAAAGAGGCAGAACCAAAAAACTTTAGGGTTCGATTTCGCTCCTTGGTAATCACCATGTCCGGAGAAGAAGAAGAGAACGCCGCCGAACTCAAGATCGGAGATGAGTTTTTGAAGGCAAAGTGCTTAATGAACTGTGAAGTCTCTTTGATTCTTGAGCACAAGTTTGAACAGCTTCAGCAAATCTCAGAGGATCCTATGAATCAAGTTTCTCAAGTGTTTGAGAAGTCCTTGCAATATGTGAAGCGATTCAGCCGCTACAAGAATCCAGATGCTGTTAGACAAGTTCGAGAAATACTAAGCAGACATCAACTCACTGAGTTTGAGCTATGTGTTCTTGGCAATCTCTGTCCTGAAACTGTTGAAGAAGCAGTGGCAATGGTTCCTTCTCTTAAGACAAAAGGAAGAGCTCATGATGATGAAGCTATTGAGAAGATGCTCAATGATCTCTCACTTGTCAAGAGATTCGAGTAGTGCAGAAGATTCTCAAGATCTAAGATTCTGAACATTTAGCAGGATGCTTTACTTGCCTTCTAGCTGATCTGGAGTTAATTCGCCACGTCTGAAATTATAAAGCTTTAATGCCTAGAATTTCTGGAATGATACCTTCATGTTAAATGAATGTAATTTACAACGGATGATCCAAGCTTTTAATGAAATATACCATCTCTTTTTCACTAAATCAAGTAAGGGATGACACTATATACATACTACACCTAAAGCAGCTATGTGTGAACTGTGAAGCTTTAATTCCATCTCTTGGCATTTTTGCTGGACTTTGACTTCTTTTTGGAAGCTTGAAACGCTTTCATCTTTTGCTTCTTCCGTGCTTCTCTCTCAGCCTTTGACATCTTTGACTTTGCTTTCACTTTTGGAGCTTTTTCTTCCAATTCTGCTTCCCTCTCCAGCTCCCTTGCTCTAGCTTCAACATTCTTCTCCAG
CDS Sequence
Protein Sequence