Gene Details:

• Gene ID: AT5G09870
• Gene Symbol: CESA5, MUM3
• Gene Name: cellulose synthase 5, MUCILAGE-MODIFIED 3
• Description: cellulose synthase 5;(source:Araport11)
• TAIR Accession: locus:2178193
• Genome: Araport11_genome_release
• Species: Arabidopsis thaliana

Transcripts:

• AT5G09870.1

Plant Ontology Annotations:

• PO:0009005  — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
• PO:0009006  — shoot system — sistema de epiblasto (epiblastema) (Spanish, exact), シュート系、苗条系 (Japanese, exact), Poaceae crown (related), shoot (related), thalli (related), thallus (related), tree crown (narrow)
• PO:0006048  — seed coat epidermis — epidermis de la cubierta de la semilla (Spanish, exact), 種子種皮表皮 (Japanese, exact)

Gene Ontology:

• GO:0009833  — involved in — plant-type primary cell wall biogenesis
• GO:0048354  — involved in — mucilage biosynthetic process involved in seed coat development
• GO:0010192  — acts upstream of or within — mucilage biosynthetic process
• GO:0009832  — acts upstream of or within — plant-type cell wall biogenesis
• GO:0030244  — involved in — cellulose biosynthetic process
• GO:0030244  — acts upstream of or within — cellulose biosynthetic process
• GO:0016760  — enables — cellulose synthase (UDP-forming) activity
• GO:0005886  — is active in — plasma membrane
• GO:0016759  — enables — cellulose synthase activity
• GO:0005886  — located in — plasma membrane
• GO:0009832  — involved in — plant-type cell wall biogenesis
• GO:0016757  — enables — glycosyltransferase activity

Germplasm Phenotype:

• CS2106718  — Seed mucilage defects.
• CS2106719  — Seed mucilage defects.
• CS3906  — Defective in seed coat mucilage secretory cells; seed coats produce mucilage with altered sugar composition and altered staining and mechanical properties.
• ixr2-1 cesa5  — The homozygous cesa6/cesa5 double mutant is seedling lethal.

Function-related keywords:

• root ,  shoot system ,  seed coat epidermis

Literature:

• The irregular xylem3 locus of Arabidopsis encodes a cellulose synthase required for secondary cell wall synthesis.   DOI:  10.1105/tpc.11.5.769 ;  PMID:  10330464
• Collapsed xylem phenotype of Arabidopsis identifies mutants deficient in cellulose deposition in the secondary cell wall.   DOI:  10.1105/tpc.9.5.689 ;  PMID:  9165747
• Isolation and characterization of mutants defective in seed coat mucilage secretory cell development in Arabidopsis.   DOI:  6897 ;  PMID:  11706181
• Evaluation and classification of RING-finger domains encoded by the Arabidopsis genome.   DOI:  10.1186/gb-2002-3-4-research0016 ;  PMID:  11983057
• Phosphoproteomics of the Arabidopsis plasma membrane and a new phosphorylation site database.   DOI:  10.1105/tpc.104.023150 ;  PMID:  15308754
• Loss of TIP1;1 aquaporin in Arabidopsis leads to cell and plant death.   DOI:  10.1111/j.1365-313X.2004.02265.x ;  PMID:  15584951
• Cellulose synthesis in higher plants.   DOI:  10.1146/annurev.cellbio.22.022206.160206 ;  PMID:  16824006
• The cellulose synthase (CESA) gene superfamily of the moss Physcomitrella patens.   DOI:  10.1007/s11103-006-9083-1 ;  PMID:  17006591
• General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis.   DOI:  10.1105/tpc.107.054809 ;  PMID:  18334669
• GeneCAT–novel webtools that combine BLAST and co-expression analyses.   DOI:  10.1093/nar/gkn292 ;  PMID:  18480120
• Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection.   DOI:  10.1104/pp.108.121038 ;  PMID:  18650403
• Transcriptional profiling of mature Arabidopsis trichomes reveals that NOECK encodes the MIXTA-like transcriptional regulator MYB106.   DOI:  10.1104/pp.108.126979 ;  PMID:  18805951
• Transcriptomic analysis of Arabidopsis developing stems: a close-up on cell wall genes.   DOI:  10.1186/1471-2229-9-6 ;  PMID:  19149885
• Thaxtomin A affects CESA-complex density, expression of cell wall genes, cell wall composition, and causes ectopic lignification in Arabidopsis thaliana seedlings.   DOI:  10.1093/jxb/ern344 ;  PMID:  19269997
• The GLABRA2 homeodomain protein directly regulates CESA5 and XTH17 gene expression in Arabidopsis roots.   DOI:  10.1111/j.1365-313X.2009.03976.x ;  PMID:  19619157
• Phylogenetically distinct cellulose synthase genes support secondary wall thickening in arabidopsis shoot trichomes and cotton fiber.   DOI:  10.1111/j.1744-7909.2010.00934.x ;  PMID:  20377682
• Subfunctionalization of cellulose synthases in seed coat epidermal cells mediates secondary radial wall synthesis and mucilage attachment.   DOI:  10.1104/pp.111.179069 ;  PMID:  21750228
• Cellulose synthesis via the FEI2 RLK/SOS5 pathway and cellulose synthase 5 is required for the structure of seed coat mucilage in Arabidopsis.   DOI:  10.1111/j.1365-313X.2011.04760.x ;  PMID:  21883548
• Phytochrome regulation of cellulose synthesis in Arabidopsis.   DOI:  10.1016/j.cub.2011.09.026 ;  PMID:  22036185
• Cellulose synthesis in two secondary cell wall processes in a single cell type.   DOI:  10.4161/psb.6.11.17709 ;  PMID:  22057330
• The FEI2-SOS5 pathway and CELLULOSE SYNTHASE 5 are required for cellulose biosynthesis in the Arabidopsis seed coat and affect pectin mucilage structure.   DOI:  10.4161/psb.18819 ;  PMID:  22353871
• Starting to gel: how Arabidopsis seed coat epidermal cells produce specialized secondary cell walls.   DOI:  10.3390/ijms16023452 ;  PMID:  25658798
• Unidirectional movement of cellulose synthase complexes in Arabidopsis seed coat epidermal cells deposit cellulose involved in mucilage extrusion, adherence, and ray formation.   DOI:  10.1104/pp.15.00478 ;  PMID:  25926481
• Highly Branched Xylan Made by IRREGULAR XYLEM14 and MUCILAGE-RELATED21 Links Mucilage to Arabidopsis Seeds.   DOI:  10.1104/pp.15.01441 ;  PMID:  26482889
• Dissecting Seed Mucilage Adherence Mediated by FEI2 and SOS5.   DOI:  10.3389/fpls.2016.01073 ;  PMID:  27524986
• The Developmental Regulator SEEDSTICK Controls Structural and Mechanical Properties of the Arabidopsis Seed Coat.   DOI:  10.1105/tpc.16.00454 ;  PMID:  27624758
• The role of COBRA-LIKE 2 function, as part of the complex network of interacting pathways regulating Arabidopsis seed mucilage polysaccharide matrix organization.   DOI:  10.1111/tpj.13871 ;  PMID:  29446495
• Cellulose Synthase Mutants Distinctively Affect Cell Growth and Cell Wall Integrity for Plant Biomass Production in Arabidopsis.   DOI:  10.1093/pcp/pcy050 ;  PMID:  29514326
• Seed hemicelluloses tailor mucilage properties and salt tolerance.   DOI:  10.1111/nph.17056 ;  PMID:  33128402
• HOMEODOMAIN GLABROUS2 regulates cellulose biosynthesis in seed coat mucilage by activating CELLULOSE SYNTHASE5.   DOI:  10.1093/plphys/kiaa007 ;  PMID:  33631797
• The Genetic Control of SEEDSTICK and LEUNIG-HOMOLOG in Seed and Fruit Development: New Insights into Cell Wall Control.   DOI:  10.3390/plants11223146 ;  PMID:  36432874
• The irregular xylem3 locus of Arabidopsis encodes a cellulose synthase required for secondary cell wall synthesis.   DOI:  10.1105/tpc.11.5.769 ;  PMID:  10330464
• Molecular analysis of cellulose biosynthesis in Arabidopsis.   DOI:  10.1126/science.279.5351.717 ;  PMID:  9445479
• Collapsed xylem phenotype of Arabidopsis identifies mutants deficient in cellulose deposition in the secondary cell wall.   DOI:  10.1105/tpc.9.5.689 ;  PMID:  9165747
• Isolation and characterization of mutants defective in seed coat mucilage secretory cell development in Arabidopsis.   DOI:  6897 ;  PMID:  11706181
• Large-scale analysis of in vivo phosphorylated membrane proteins by immobilized metal ion affinity chromatography and mass spectrometry.   DOI:  10.1074/mcp.T300006-MCP200 ;  PMID:  14506206
• Quantitative phosphoproteomics of early elicitor signaling in Arabidopsis.   DOI:  10.1074/mcp.M600429-MCP200 ;  PMID:  17317660
• General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis.   DOI:  10.1105/tpc.107.054809 ;  PMID:  18334669

Sequences: