Information report for AT5G09840
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- GO:0004540 — enables — RNA nuclease activity
- GO:0005777 — located in — peroxisome
- GO:0009507 — located in — chloroplast
- GO:0005739 — located in — mitochondrion
- GO:0016070 — acts upstream of or within — RNA metabolic process
- GO:0010468 — involved in — regulation of gene expression
Functional Keywords
Literature and News
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Arabidopsis response regulator, ARR22, ectopic expression of which results in phenotypes similar to the wol cytokinin-receptor mutant. DOI: 10.1093/pcp/pch128 ; PMID: 15356332
- Combinatorial microarray analysis revealing arabidopsis genes implicated in cytokinin responses through the His->Asp Phosphorelay circuitry. DOI: 10.1093/pcp/pci033 ; PMID: 15695462
- Two NYN domain containing putative nucleases are involved in transcript maturation in Arabidopsis mitochondria. DOI: 10.1111/tpj.13111 ; PMID: 26711866
- Determination of protein-only RNase P interactome in Arabidopsis mitochondria and chloroplasts identifies a complex between PRORP1 and another NYN domain nuclease. DOI: 10.1111/tpj.14458 ; PMID: 31319441
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
Gene Resources
- UniProt: Q9FIC2
- EMBL: AB016893, CP002688
- AlphaFoldDB: Q9FIC2
- EnsemblPlants: AT5G09840.1
- Gramene: AT5G09840.1
- KEGG: ath:AT5G09840
- Orthologous matrix: GHYKAPL
Sequences
cDNA Sequence
- >AT5G09840.1
TTATCGACAATTCCAAAATAATAACTAGGGTTTAAGCTCTGCTTTCCTTTACTTCGTCTTCCTCACTCCTAAAACCCTCTCAGTCTCTCCATTTCCCGGAGCAAAAATAGCTCTCCGACCATGAAGTTTGGATCTTTACCATCCAAATCCCTTCTCTTCCGCCTCTCTTCTTCCTCCACAACCCAATCTCACCGTCGAACAATTACCCTTTTCATCACTAACATTCATTCCTCTCCATTCTCCACCACAACCACCTCCGGCTCCAATTTCGTCTCCGGATCCAGCCATTCTCCCTCTCGACGTCCTCAGCAAGACGAAGAGTCCCGATCCGTTAGGGTTTCGGTCTGGTGGGACTTCCTGAGCTGTAACTTACCTGTAGACACCAATGTCTACAAAGTAGCACAATCAATCACCGCCGCTATCAGAAACAGCGGAATCAAAGGACCAATCACAATCACAGCCTTCGGTGACGTTTTACAGCTCCCCAGATCAAACCAAGACGCTCTCTCCGCTACAGGAATCAGTCTCACTCATGTTCCTAACGGTGGTAAGAACAGTGCTGATAGATCTCTAATCACAGATCTTATGTGTTGGGTTTCTCAGAATCCACCACCAGCTCATCTTTTGCTAATCTCTAGTGATAAGGAGTTTGCAAGTGTGTTACATAGATTGAGGATGAACAATTACAACATTTTGCTTGCGAGTAAATCATCAGCTCCTGGTGTTTTGTGTAGTGCTGCTTCTATTATGTGGGATTGGGATGCTTTGATTAAAGGAGAGTGTGTTACTGGTAAGCATTTTAATCAGCCTCCTGATGGTCCTTATAACTCTTGGTATGGTCACTATAGGATTCCTCTTCTTGATCCATTTGCTATTGCTACCACTACTGAGCAATCTTCGTCTAGTGTGAAAATCGAAGAACTATCCGAGTCTGTGAATTCGAATGCTGTTGTTAACCTTCGTCCTATTCCAAAAGAAGTTGTTGATAAGATTCGTTCGATAGTGAGTTTATATCCCAAGGGGGCTGCCATTACAGAACTACGTGCTGAGCTGAGTAAGAGCAACTTGGCTATTGATAAAGATTTCTATGGACATAAGAAGTTTTCGAAGTTTCTTTTATCCATGCCAGATATCTTACAGGTTACTACAGTAAGTGAAGGCTTGTTTATGATTCGGGCTGTTACCGAAAAGAAGCCTCCGATGCGGCTTGATTCTAGTCCTCGTTTGTCTACTGCTGTTGATCAGAAGATTAAAGATAAGGAAACTGTTAATGCTCCATCACCAAAGCTAATTAGCGATGTAGAGCTTGCTGCTGAAAGAAGAAGAGATGGCTTACTTGGAAAGAAGCAGGAAAAGGTATTGGAGAGTGATAAAATTGTTAAAGAAGAATCATCAGAGAGTTCTCAAGACCCAATTCTGGTCGGCCAGAAGGATGTTAAGGCAAATGTTAAACCCGTCGAGACGAATCAAGTCGCTCTTGTTGCGTGGAGTGATTCGTCCATGGAAGATGGCTTTTTTCAAAAGCTAAAAAGACTGTGGTATGGTTCACCTGAGATGGAATTAGAGCATCTCCCAGAAATGAAGAGCGTTTCTGGAAGTGGAGACACACATAGAGAGGATAATGACTTAAAGTCATCAAGTCAGGGAAGTGGAAACAAACATAAAGAGGATAAGGACTTAAAGTCATCGAGTCAGGGAACTGTGCCCATGTCTCAAATCTCACCTTCTTTCGTTGCTGAGTCGGTCGATGAGGTAAAAGTTGGAGCTGATGACGTAGACAGTAAAGATAAAGATGCAAGTCCAGGCTTTTTAGGTCGCCTTTTGAAGAGTTTCAAGTTCTGGGGAAAGAATACAAAGTCTAGCAAAGACTCTAGTGGGAATCAGGAGCTTGTCAATGTTGATTCTCAAGTACAAGACATATTTGCAAAAGAGTATTTTTGGAGTGATATTGAATCTTTCATTAATTCTCCAAGAGGCTTTGCTATAGTATCTCACTCGAGGACAAGGGAGGTGATGGCTAAAAATGTGCAGGAGGAAGGGCCTTCGTGTCTCAGACTGCTCGATGAATCAAGCATGCTTCATTTAGTTACTTTGCTAATATCAGAAAAGAAATGGATTGAAGAAACCCCATCTTCTTCTTTACCATTCAGAATCATCAAAGGATCTAGCCCTGGCCACCGTCATGCTTCAAACGGTTTGAGCTCAATCTTCTCGGATTCTTCAAAATCACAGTGGCAGAAACAAAATGGTGAGAAAAGCGGCAAGAACGTTGCTCATGCTGGAGTTTCTGTTGGTTCTGTGGACCGGAAAGAGCTGGAAAGATACAAAAGTAATGCAATAGCGGATTGTCAGAAGATGATAAAGAAGATAACAGAGGAACACCCTGAAGGGTATAGCCTGATTCGTTTCAGGAAAGACTTCTTAGAGGAGTATGGGTACCATTTAGCGGTTGACAAGCTCGGTTACGACAACCTGCAGTCTCTGATTCGAGTCATGCATGGAGTGAGAATAGCATCTGGATACATCTTTCCTTCAACTCCTTCACCAAATGCCAAGTCAAAAGAAGATGATTCGGACTTGGCATTCGCAGAACTTGGTCCAGTTTCTGATACAACAACTACCCACCCGACGACCAAAAAGCTTCCAGTATATGAACCATCACTCTCAGAGGATGAAGAAGATTCTGGTTCAGAGAGAGATAACCCAGAGAAGAAGAAGCAACAGATGATGAGTAAAGAAGGTAAAGAGAGCTCGTTATTGCAAATTCTGGATTCTTATTACACAAATAAAGATGGAGAATTGAAGGAGAATCCGGTGGAGAGGAAGCTTGTAAGCAACGGTAGAAAGCAAAAGCCTACAAAGACGTATTCTTTTGTGAAAGATTCAGAAGTCTAGTGAGTCAGAGGGTTGTTTACTGTTTAATTAACAATCTCCCGAGGAATTGAGTGTAATTAGTTGAAGCCGGTTTTGGGTTTGGTCTATGGTAAACCGAATCCGGTTAAGGAGAAATAAGATTAATATGGTTCAAACTCTTTTCAGTGGCAAGTCGCATCGTATGCATTTATTGATAGGTTTTACTGTATTACGTGATTTTTTAAATTAAATTTTGGTTCTT
CDS Sequence
Protein Sequence