Information report for AT5G09420
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000014 — rosette leaf — hoja en roseta (Spanish, exact), ロゼット葉 (Japanese, exact)
- PO:0000056 — flower bud — floral bud (exact), yema floral (Spanish, exact), 花芽 (Japanese, exact)
- GO:0006626 — acts upstream of or within — protein targeting to mitochondrion
- GO:0005515 — enables — protein binding
- GO:0005739 — located in — mitochondrion
- GO:0030150 — acts upstream of or within — protein import into mitochondrial matrix
- GO:0030150 — involved in — protein import into mitochondrial matrix
- CS869031 — Irregular leaf surface and irregular leaf margins; numerous lateral inflorescences, bushy plants; short siliques; average height = 38 cm.
- toc64-III-1 toc64-V — No visible phenotype.
- toc64-III-1 toc64-V toc64-I — No visible phenotype.
- toc64-V — No visible phenotype.
- toc64-V toc64-I — No visible phenotype.
Functional Keywords
- root , rosette leaf , flower bud , root
Literature and News
- Rapid identification of Arabidopsis insertion mutants by non-radioactive detection of T-DNA tagged genes. DOI: 10.1046/j.1365-313x.2002.01416.x ; PMID: 12383089
- Prediction of the plant beta-barrel proteome: a case study of the chloroplast outer envelope. DOI: 10.1110/ps.0237503 ; PMID: 12649433
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- A plant outer mitochondrial membrane protein with high amino acid sequence identity to a chloroplast protein import receptor. DOI: 10.1016/s0014-5793(03)01457-1 ; PMID: 14741350
- Subcellular localization and tissue specific expression of amidase 1 from Arabidopsis thaliana. DOI: 10.1007/s00425-006-0304-2 ; PMID: 16738862
- Toc64/OEP64 is not essential for the efficient import of proteins into chloroplasts in Arabidopsis thaliana. DOI: 10.1111/j.1365-313X.2007.03207.x ; PMID: 17655652
- AKR2A-mediated import of chloroplast outer membrane proteins is essential for chloroplast biogenesis. DOI: 10.1038/ncb1683 ; PMID: 18193034
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Targeting of nucleus-encoded proteins to chloroplasts in plants. DOI: 10.1111/j.1469-8137.2008.02452.x ; PMID: 19086173
- In silico identification of carboxylate clamp type tetratricopeptide repeat proteins in Arabidopsis and rice as putative co-chaperones of Hsp90/Hsp70. DOI: 10.1371/journal.pone.0012761 ; PMID: 20856808
- An in silico analysis of the mitochondrial protein import apparatus of plants. DOI: 10.1186/1471-2229-10-249 ; PMID: 21078193
- Identification of proteins enriched in rice egg or sperm cells by single-cell proteomics. DOI: 10.1371/journal.pone.0069578 ; PMID: 23936051
- IMTACT (isolation of mitochondria tagged in specific cell types). DOI: 10.1111/tpj.14723 ; PMID: 32057155
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Functional definition of outer membrane proteins involved in preprotein import into mitochondria. DOI: 10.1105/tpc.107.050534 ; PMID: 17981999
Gene Resources
- UniProt: A0A178UC85
- EMBL: CACRSJ010000110, CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UC85
- EnsemblPlants: AT5G09420.1
- Gramene: AT5G09420.1
- KEGG: ath:AT5G09420
- Orthologous matrix: WKRTHEP
- ExpressionAtlas: AT5G09420
- InterPro: IPR011990, IPR019734, IPR023631
- PANTHER: PTHR46310, PTHR46310:SF4
- SUPFAM: SSF48452, SSF75304
- PROSITE: PS50005
- Gene3D: 1.25.40.10, 3.90.1300.10
- OrthoDB: A0A178UC85
- SWISS-MODEL: A0A178UC85
Sequences
cDNA Sequence
- >AT5G09420.1
GTTTAGACACAGTGCGCACGATAGCATCTGTGTTTGCTTCTTCCAAATCTCTCTCCTATTTTTCTTTCCCCTTTTCTCTCTTAAACCCTCCTAAAACCCTTGTCTCTCTCTCTCTCTCTCTCTCTTTCTCGTGAGATCGCGTTATGTCGAATACGCTTTCTTTGATTCAAAGCAATGCCTCGAATCCCAAAGTTTGGGTAGTGATCGGCGTGACGGTGGCCGGGATCGTGATTCTGGCGGAGACCCGGAAGCGGCGGATTAGAGCCCTTAGAGAAGAAGACTTTGGTGCTTTCTTAGATCGTTTCGAGCTTCTTCCTTTCCCTCCGCCTCCTCCTCCTGCTGCTAAACAATCTCTCTCTGGTCTTACCTTCTCCATCTCCGACGCGTTCGATGTTAAGGATTATATCACAGGATTTGGTTGTCCACAATGGAAGAAGACTCATGAGGCTGCTGAGAAAACTGCTGTGGTTGTCACGACGCTCTTGAAAAATGGAGCTACTTGTGTTGGCAAGACTATAATGGATGAGCTGGGTTTTGGGATTATTGGAGAAAACAAGCACTATGGAACTCCTATTAATCCATTGATGCCAGATAATGTTCCTGGAGGATGTTCCAGTGGCTCAGCAGTTTCTGTTGGGGCTGAACTCGTTGACTTTTCACTTGGGATTGATACCACTGGTGGTGTTAGAGTCCCAGCAGCCTTTTGTGGTATTCTTGGTTTTCGACCATCTCAGGGGACTGTTTCTTCAGTTGGAGTTTTGCCCAATTCTCAGAGCCTAGAGACTGTTGGATGGTTTGCCTCTGATCCATCCGTTTTGTGTCAAGTTGGACATGCCTTACTAAATCTGAGTGCAGTAACACATAGAAGGCAAAGATCTTTAATCTTTGCTGATGATTTATTCGAGCTCTCTGACATTCCTAAGCAAAAGTCGGTGCAAGTTGTCAGAAAGGCAATCGAGAATCTATCTGGCTACAAGACTCCAAAACATGTTAACGTTGGCCAATATGTCGCTTCAAATGTACCAAGTCTTGCGGAATTCTGTGAGCAATCTGGGAAATCCCAAAATTCAGCATCAACTTTAAGGGCTCTTTCATCTGTGATGTTGGCTATACAAAGGCATGAGTTCAAAACAAATCATGAAGAATGGTGGCAAACATGCAAATCGTTTCTAGGGCCAAGATTTTCCAATGATGTTGTTACAGCTCTGAAGAGCAAAAACGAGAGCATTAAATCCCTCTACAGAGTGAAAAATGAGATGCGGGCCACCATTCAAAGCCTTTTAAAGGAAGATGGAATTCTGGTAATCCCCACAGTTGCTGATCCCCCTCCAAGGCTTAACACAAAGAGAAATAAATCTTTGAATGAGTTTCTTGATCGTACTTATGCACTCTCCTGCATTGCAAGCATGTCTGGATGTTGTCAGGTTACAATTCCTTTAGGGGAACATGGTGATCGTCCAATATCCGTGTCGCTTCTTACTTACTATGGAGGTGATAAGTTCCTTCTCGATACAACTCTCGATGTATATGCATCCCTTCAAGACCAAGCCAAACTTGCATCCAACTTAGCTCCAGTGTCTGACACCAATGGTAACATGGAGGCTTCTGAAGTTATGAAAGAAAAGGGCAATGCTGCATACAAGGGGAAACAATGGAATAAGGCGGTAAACTTTTATACAGAAGCTATAAAATTGAATGGAGCAAATGCTACTTATTATTGCAATAGAGCTGCAGCTTTCTTGGAACTTTGCTGCTTCCAACAAGCCGAACAAGATTGTACCAAGGCCATGTTGATCGATAAGAAGAATGTGAAGGCATATTTGAGACGAGGGACTGCTAGAGAATCACTTGTACGGTACAAGGAAGCTGCTGCAGATTTCAGGCACGCATTGGTCCTTGAACCACAGAACAAGACGGCAAAGGTTGCTGAGAAGAGACTCCGAAAACACATATGAGTTAAAAAGGATTATTACTCGATTTCTCTTGTTCACCAATCTATCTTTTCACTTATCTAAAACCCTAAAAAGGAAAGGTTTTGCTCCGGTTTCAACAGACTAATAATTTAGTGGTTTTGTGACATGTGTACAGATTGGGATGAAAACTTCTACCTCTAATTACTTGATCTGAAAAGTTTTATGGGGTCCTTTTAGCTTCTTTGTTTTCTTAACGGTCTTTTACGTAAATTACAATTTCCCCCAAGTCCAATACTGTAATTCCTTAAATTAC
CDS Sequence
Protein Sequence