Information report for AT5G08720
Gene Details
|
|
Functional Descriptions
- GO:0042644 — located in — chloroplast nucleoid
- NONE — enables — mRNA 5-UTR binding GO:0048027 14101 F RNA binding IPI Co-immunoprecipitation AGI_LocusCode:ATCG00350 Publication:501765974|PMID:26307378 TAIR 2016-01-14 AT5G08720 locus:504956340 AT5G08720 located in mitochondrion GO:0005739 486 C mitochondrion HDA none NONE Publication:501711651|PMID:14671022 hmillar 2021-04-15 AT5G08720 locus:504956340 AT5G08720 located in chloroplast nucleoid GO:0042644 14200 C chloroplast IDA localization of GFP/YFP fusion protein Publication:501765974|PMID:26307378 TAIR 2015-10-23 AT5G08720 locus:504956340 AT5G08720 involved in regulation of photosynthesis, light reaction GO:0042548 13570 P other cellular processes IMP analysis of physiological response Publication:501765974|PMID:26307378 TAIR 2021-04-30 AT5G08720 locus:504956340 AT5G08720 enables protein binding GO:0005515 3877 F protein binding IPI none UniProtKB:Q7G8V2 Publication:501727302|PMID:18642946 2023-05-23 AT5G08720 locus:504956340 AT5G08720 involved in regulation of photosynthesis, light reaction GO:0042548 13570 P photosynthesis IMP analysis of physiological response Publication:501765974|PMID:26307378 TAIR 2021-04-30 AT5G08720 locus:504956340 AT5G08720 acts upstream of or within polycistronic mRNA processing GO:0031426 21034 P other metabolic processes IMP biochemical/chemical analysis NONE Publication:501765974|PMID:26307378 TAIR 2015-10-23 AT5G08720 locus:504956340 AT5G08720 located in chloroplast GO:0009507 175 C chloroplast IDA localization of GFP/YFP fusion protein Publication:501765974|PMID:26307378 TAIR 2015-10-23 AT5G08720 gene:504954188 AT5G08720.1 located in chloroplast GO:0009507 175 C chloroplast ISM predicted protein features AnalysisReference:501780126 rkaundal 2018-08-31 AT5G08720 locus:504956340 AT5G08720 acts upstream of or within chloroplast mRNA processing GO:0010239 19804 P nucleobase-containing compound metabolic process IMP analysis of another genes protein levels
- GO:0042548 — involved in — regulation of photosynthesis, light reaction
- GO:0031426 — acts upstream of or within — polycistronic mRNA processing
- GO:0010239 — acts upstream of or within — chloroplast mRNA processing
Functional Keywords
Literature and News
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
- Evolution of Arabidopsis microRNA families through duplication events. DOI: 10.1101/gr.4680506 ; PMID: 16520461
- PPP1, a plant-specific regulator of transcription controls Arabidopsis development and PIN expression. DOI: 10.1038/srep32196 ; PMID: 27553690
- Experimental analysis of the Arabidopsis mitochondrial proteome highlights signaling and regulatory components, provides assessment of targeting prediction programs, and indicates plant-specific mitochondrial proteins. DOI: 10.1105/tpc.016055 ; PMID: 14671022
Gene Resources
- UniProt: Q9C5A5
- EMBL: AK117869, AL590346, BT005959
- AlphaFoldDB: Q9C5A5
- EnsemblPlants: AT5G08720.1
- Gramene: AT5G08720.1
- KEGG: ath:AT5G08720
- Orthologous matrix: DHWGAEY
- ExpressionAtlas: AT5G08720
- InterPro: IPR005031, IPR023393
- PANTHER: PTHR34060, PTHR34060:SF2
- SUPFAM: SSF55961
- Gene3D: 3.30.530.20
- OrthoDB: Q9C5A5
- Conserved Domain Database: cd08866
Sequences
cDNA Sequence
- >AT5G08720.1
CAGAGGAACAATAAAGTTTAAATCATGGTTTCGAATATAATGTCTATTGAAGAACAAAAGGTGAATTTCAACCATACATCAAATATATAAAATAAGAAAAAATCCGGTGGCTGAGAATATTTAACGGTAATGTAACACTCTGCAACAGTATCTTCTTCCTCTACACTGACACATTTCGTCGAACACCTTTCGCTAATGTCAGTGAGCAAGTTTCCACATCTCTCTCATGGCGTTCACACTATCAATTTCCTCAATGAACCAGTGTTTTTAAGTGTGTTGCTCCCATCTCCCTCTCGGATTCGAGTATTCTCGTCCATTTCCACCTCCGGGATCGGCGGCGGGGTCGCCAAGTGCCATGGAACGAGACATAGCGGCGCCGGTGGTAGAGGTGATAACGGGTTGAGGAGAGATAGTGGATTAGGTTTCGACGAGAGAGGAGAGAGAAAAGTGCGTTGTGAGGTTGATGTGATCTCGTGGAGAGAACGGAGGATAAGAGGCGAAATCTGGGTCGATTCTGATTCTCAATCTGTTTGGAATGTTCTTACTGATTATGAACGACTTGCTGATTTCATACCCAATCTCGTTTGGAGTGGAAGAATTCCTTGTCCACATCCAGGACGTATATGGCTGGAGCAACGAGGCCTTCAAAGAGCCTTGTATTGGCATATTGAGGCTCGTGTTGTCCTTGATCTCCATGAGTGTCTAGATTCTCCAAATGGTCGTGAGCTTCACTTCTCTATGGTAGATGGTGATTTCAAAAAGTTTGAGGGAAAGTGGTCTGTGAAATCTGGTATCAGGTCCGTAGGAACTGTCTTGTCATACGAAGTAAACGTAATCCCAAGATTTAACTTCCCTGCCATTTTCTTAGAGAGGATAATCAGATCAGATCTTCCTGTAAATCTCCGGGCCGTAGCTCGCCAAGCTGAGAAAATTTATAAAGATTGCGGAAAGCCGTCAATAATAGAAGATTTGTTGGGTATAATATCTTCACAGCCAGCCCCTTCTAATGGTATTGAGTTCGATAGTCTTGCTACGGAGAGATCTGTTGCCTCCAGTGTTGGATCATTAGCTCATTCAAATGAATTGAACAACAATTGGGGAGTGTATGGAAAAGCCTGCAAGCTTGATAAACCTTGCACCGTGGATGAAGTTCATCTTCGTAGATTTGATGGTCTATTGGAAAATGGAGGTGTTCACCGATGCGCCGTTGCTAGTATAACAGTTAAAGCTCCTGTTTGTGAAGTTTGGAAAGTTCTAACGTCTTATGAGAGTCTTCCAGAGATAGTTCCAAATTTGGCAATCAGCAAGATTTTGTCACGCGATAACAATAAAGTCCGAATACTTCAGGAAGGATGCAAAGGCCTGCTTTACATGGTGCTTCATGCAAGAGCTGTTCTCGATTTGCATGAGATTCGTGAGCAGGAAATCAGATTTGAACAGGTTGAAGGAGACTTTGACTCGCTAGAGGGGAAATGGATTTTTGAACAACTAGGAAGTCACCACACACTTCTCAAGTATACCGTGGAGTCCAAAATGAGAAAAGATTCATTTCTTTCTGAAGCAATCATGGAAGAGGTTATATATGAAGATCTTCCGTCAAATTTATGCGCTATCCGGGATTACATTGAGAAAAGAGGAGAGAAATCTTCAGAGTCATGTAAACTGGAGACATGTCAAGTTTCAGAGGAAACATGTTCTTCATCTCGTGCCAAATCAGTTGAGACAGTTTACAATAATGATGATGGTTCAGACCAAACTAAGCAGAGACGGAGGATTCCTGGTCTACAAAGAGACATTGAAGTCTTGAAATCAGAAATTCTCAAGTTCATATCAGAACATGGACAAGAAGGATTCATGCCCATGAGGAAGCAGCTTCGGTTACATGGAAGAGTTGACATTGAAAAAGCCATTACAAGAATGGGTGGATTTAGGAGAATAGCTTTGATGATGAATCTTTCACTTGCTTATAAACACCGAAAACCGAAAGGATATTGGGACAATCTCGAAAACTTGCAAGAGGAGATAGGAAGATTTCAACAGAGTTGGGGAATGGATCCATCATTTATGCCGAGCAGAAAATCTTTCGAACGAGCAGGTCGTTATGACATTGCTCGGGCGCTCGAGAAATGGGGAGGATTACACGAAGTATCTCGTCTTTTAGCATTGAACGTGAGACATCCAAACAGGCAGCTAAATTCTCGTAAAGACAACGGTAACACGATACTGAGAACTGAATCTACTGAGGCCGATTTAAATTCAACGGTTAATAAGAATAATAAACCTTACGTCTCTCAAGATACCGAGAAATGGTTGTACAATCTTAAAGATCTTGATATCAATTGGGTTCAATATTGAAGCATTAATTATGTACATTTCACTATTTGTGTAGTCTTGTAACTCGCAAAGATAAACATGTATTTATGTAAATTGTAACATTGGATTGAAATTATCTGATCTCTTTTTAATGTTTCATCTGTTTTTAG
CDS Sequence
Protein Sequence