Information report for AT5G08610
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
- GO:0003729 — enables — mRNA binding
- GO:0009507 — located in — chloroplast
- GO:0003724 — enables — RNA helicase activity
- GO:0005739 — located in — mitochondrion
- GO:0008150 — involved in — biological_process
Functional Keywords
Literature and News
- Transcriptome changes for Arabidopsis in response to salt, osmotic, and cold stress. DOI: 10.1104/pp.008532 ; PMID: 12481097
- Phosphoproteomics reveals extensive in vivo phosphorylation of Arabidopsis proteins involved in RNA metabolism. DOI: 10.1093/nar/gkl429 ; PMID: 16807317
- Simultaneous interaction of Arabidopsis thaliana with Bradyrhizobium Sp. strain ORS278 and Pseudomonas syringae pv. tomato DC3000 leads to complex transcriptome changes. DOI: 10.1094/MPMI-21-2-0244 ; PMID: 18184068
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- Identification of nuclear genes encoding chloroplast-localized proteins required for embryo development in Arabidopsis. DOI: 10.1104/pp.110.168120 ; PMID: 21139083
- Recruitment of Arabidopsis RNA Helicase AtRH9 to the Viral Replication Complex by Viral Replicase to Promote Turnip Mosaic Virus Replication. DOI: 10.1038/srep30297 ; PMID: 27456972
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Phosphoproteomics reveals extensive in vivo phosphorylation of Arabidopsis proteins involved in RNA metabolism. DOI: 10.1093/nar/gkl429 ; PMID: 16807317
- Sorting signals, N-terminal modifications and abundance of the chloroplast proteome. DOI: 10.1371/journal.pone.0001994 ; PMID: 18431481
Gene Resources
- UniProt: A0A178UFQ6
- EMBL: CACSHJ010000096, LUHQ01000005
- AlphaFoldDB: A0A178UFQ6
- EnsemblPlants: AT5G08610.1
- Gramene: AT5G08610.1
- KEGG: ath:AT5G08610
- Orthologous matrix: LAPWEEK
- ExpressionAtlas: AT5G08610
- InterPro: IPR001650, IPR011545, IPR014001
- PANTHER: PTHR24031
- SUPFAM: SSF52540
- PROSITE: PS51192, PS51194, PS51195
- Gene3D: 3.40.50.300
- OrthoDB: A0A178UFQ6
- SWISS-MODEL: A0A178UFQ6
- Conserved Domain Database: cd17964, cd18787
Sequences
cDNA Sequence
- >AT5G08610.1
AAAACCCCTCTCGACATTTTGCGACTCTTCTTCTCCTTATCCTCTAAATCTCTCACCGGTCACCGACGACGGGAACTTGGTAGTTACAGGAACAAGAAATGTCCTCGAAGTTCCCTCTCGGTGTACGCTTCATCACTCATTCTCTTCCTTGTACTCGTCTCGCTTCCATGAATTCTGGCGCCCTTATCTATTCATTTCGTTCCGTTCCTGTTCTATCCAAAGCCTTTCCTTTTAGGTTAAAGTACATTGGATTAGGTTCCCGGGTCAACTTTTCAACCCGACCAGAGAGATCTCAACCCGAATTCGCGCGGCGAAGTGGAGCTGGAGGAGAGATTCGCGCGTCCAAGAGCTTGATTGAGGATGAGGCAGAGCTTAGTGATTGGGTGAGCGATTTGAGGACTAGTTCGTTGCGCGGGAAGTTCACGAGCGACGAAGATAACGCGGATCCAGAGGTGGTTCGTAGAAACGTAGACAGGGACACCAGTAGGGGTCCAAGGAGAGGAAGGGAAGGCCAATCTGATAGGTTCGGTGGTGCGAAAAGGGGAAAGGAAGGTGAAATGGATAGGTTTGGGAGTCCGAACAGGAGGAGAACCAGCGGCGAGCCTGCTGATTCGTTCGGGAACAAGCGGTTAGGTGATCGAGAAGGTTCAAGGAACGGTCGTGTTCAAGGAAAGAGTAGTGAGTCGTCTTTTCGTGGAAGGAGTGATAGAAATGTAGATTCAGGGTCGTCTTTTCGTGGAAGGAGTGACAAAAATGTTGACTCAGGGTCGTCTTTTCGTGGTAGGAATGATAGAAATGTAGATTCAGGGTCGTCTTTTCGTGGAAGGAGTGATAGAAATGTAGACTCAGGGTCGTCTTTTCGTGGAAGGAGTGATAGAAATGTAGACTCAGGGTCGTCTTTTCGTGGTAGGAATGATAGAAATGTAGACTCAGGGTCGTCTTTTCGTGGTAGGAATGATAGAAATGTAGAATCAGGGTTTAGGAGAGAGCCAGGTTCCGAAAACAACAGGGGCTTGGGGAAACAGACAAGAGGCTTAAGCCTGGAAGAGGAAGATAGTAGTGACGATGACGAGAACAGGGTTGGATTGGGAAACATCGATGATTTGCCTAGTGAAGATAGTAGTGATGAGGATGATGAAAATGATGAGCCTCTTATTAAGAAAGCGGCTTCTGCTAAGGCTGTTCAGACTGATAAGCCAACTGGTGAACATGTCAAAACTTCAGATTCTTACTTGTCTAAGACAAGATTTGATCAATTCCCACTCTCTCCCTTATCGCTAAAAGCCATCAAGGATGCGGGATTTGAGACAATGACTGTTGTGCAGGAGGCTACTCTTCCTATCATTCTCCAAGGTAAAGATGTCCTAGCCAAGGCCAAAACAGGCACTGGTAAAACCGTTGCATTTTTGCTTCCAGCAATTGAAGCTGTTATCAAATCTCCTCCTGCAAGCCGGGATAGTAGGCAACCCCCAATTATTGTGCTTGTGGTATGTCCTACTCGGGAACTTGCCAGTCAAGCTGCGGCAGAGGCAAATACCTTACTGAAGTATCACCCCTCTATTGGTGTTCAAGTTGTGATTGGAGGCACAAAGCTTCCTACAGAGCAAAGGCGTATGCAAACGAATCCTTGCCAGATCCTTGTGGCTACACCTGGAAGGCTCAAAGACCATATTGAAAACACTTCTGGATTCGCAACAAGATTGATGGGTGTGAAAGTCCTTGTGCTTGACGAAGCTGATCATCTCTTGGACATGGGTTTCCGAAGGGACATTGAGAGGATAATTGCCGCTGTTCCTAAGCAGAGACAAACATTTTTATTTTCTGCCACCGTACCTGAAGAGGTCCGCCAAATATGCCATGTTGCTCTGAAACGGGATCATGAGTTCATCAATTGTGTCCAAGAGGGCTCTGGGGAGACACATCAAAAGGTCACACAAATGTACATGATTGCATCACTGGATAGACATTTTTCGCTTCTACATGTGCTTCTTAAAGAACACATCGCAGATAATGTGGACTATAAGGTTATCATTTTCTGTACAACTGCTATGGTGACAAGATTGGTGGCTGATCTGCTTAGTCAGCTAAGCCTGAACGTCAGAGAGATCCATTCTAGAAAACCGCAGAGTTACAGAACCAGAGTTTCTGATGAGTTCCGCAAGTCCAAGGCTATTATCCTAGTCACATCTGATGTATCTGCTCGTGGTGTGGATTACCCTGATGTGTCATTGGTCGTACAGATGGGATTGCCATCAGACAGGGAGCAGTATATACATAGACTTGGCAGAACCGGGCGGAAAGGGAAGGAAGGGGAAGGAGTCTTATTGTTGGCACCATGGGAAGAGTACTTTATGTCATCTGTTAAAGACTTGCCCATCACCAAGTCTCCACTACCGCCAATAGACCCAGAGGCTGTGAAAAGGGTGCAGAAAGGGCTGAGCCAAGTGGAAATGAAGAACAAGGAGGCGGCGTATCAGGCGTGGTTGGGTTACTACAAATCTCAGAAGATGATTGCAAGAGACACGACCAGACTGGTGGAGCTGGCCAATGAGTTTAGCCGCAGCATGGGACTTGACAGCCCACCAGCTATCCCCAAAAATGTTCTTGGCAAGATGGGTCTCAAAAACGTTCCTGGTCTTAGAACCAAGTAGATTTTCTTTTTTCCTAGTGATCTGCTTTGGTTTTAAAACTTTAATGTTTTGTAAGTGTAGACGTGTAGTCTCTTGTCATTCTTGCTACACTCTTAAGACTTCCTAACTAAAAAATCCTATAAAAGTTGCCTTCTTATAAAGGTCTTTTGTTTGTAATGGC
CDS Sequence
Protein Sequence