Gene Details:
- Gene ID: AT5G08565
- Gene Symbol: SPT4-1
- Gene Name:
- Description: Transcription initiation Spt4-like protein;(source:Araport11)
- TAIR Accession: locus:505006588
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000084 — plant sperm cell — célula espermática o esperma (Spanish, exact), male gamete (exact), microgamete (exact), 植物精子細胞 (Japanese, exact), sperm nucleus (related), sperm cell (broad)
Gene Ontology:
- GO:0032786 — involved in — positive regulation of DNA-templated transcription, elongation
- GO:0034243 — involved in — regulation of transcription elongation by RNA polymerase II
- GO:0005634 — located in — nucleus
- GO:0000993 — enables — RNA polymerase II complex binding
- GO:0008270 — enables — zinc ion binding
- GO:0032044 — part of — DSIF complex
- GO:0006325 — involved in — chromatin organization
Function-related keywords:
Literature:
- Transcriptome analyses show changes in gene expression to accompany pollen germination and tube growth in Arabidopsis. DOI: 10.1104/pp.108.126375 ; PMID: 18775970
- The transcript elongation factor SPT4/SPT5 is involved in auxin-related gene expression in Arabidopsis. DOI: 10.1093/nar/gku096 ; PMID: 24497194
- Elongator Is Required for Root Stem Cell Maintenance by Regulating SHORTROOT Transcription. DOI: 10.1104/pp.18.00534 ; PMID: 30401723
Sequences:
cDNA Sequence
- >AT5G08565.2
TAGACATTAGACACGGAGACATTGTTGTCGTTCTTCGCAGACATTTCGATTTTGAAGACAAATCACAATGGGAGAAGCGCCTGCCCAGATTCCGACGAGTTTCGGCCACGAGCTTAGGGCTTGTCTTCGATGCCGCCTCGTCAAGACCTACGATCAGTTTAGGGATTCTGGATGCGAGAACTGTCCTTTCTTCAAAATAGAAGACGATCATGAACGCATCGTCGATGTTACAACTCCCAACTTCAATGGCTTTGTTTCAGACAGAAGAGAAATAAATCTAACACATTGCAATATCTTGTTTCCAGGGAAGTTTGCTCCTGGTTGCTACACTCTTGCTGTCTCAGAGGCACTCCCAGAGGAAATGCAGTTCATATGCCAACAAGCACGGGTGCAGTACGTTCCACCCAAACGTATTTGAAACCTTTTGCAGGTTGCAGCAAGTGTCTCCATATTAGCATCTCTGCAAGTCGTCAGTTTCAAGACAACTTAGTCCGATGGAGGTTATGAATGGAAGTAGTTAAGTTTTATGTACTTTGTTTCTGATTTCAACTAATATAGAGAGATTTGATCCTCTTATTGTTATCAAAAACTCTTATTTGATCCGGAAGATAGAGATAGATTACATTTTTTTTTTCAAGTATGGAATGGATTTCTTTTCCTGTGATATTCAGTACATTATTTGAATTACAAAATGAAGAAACTTTAAATTG - >AT5G08565.1
TAGACATTAGACACGGAGACATTGTTGTCGTTCTTCGCAGACATTTCGATTTTGAAGACAAATCACAATGGGAGAAGCGCCTGCCCAGATTCCGACGAGTTTCGGCCACGAGCTTAGGGCTTGTCTTCGATGCCGCCTCGTCAAGACCTACGATCAGTTTAGGGATTCTGGATGCGAGAACTGTCCTTTCTTCAAAATAGAAGACGATCATGAACGCATCGTCGATGTTACAACTCCCAACTTCAATGGCTTTGTTTCAGACAGAAGAGAAATAAATCTAACACATTGCAATATCTTGTTTCCAGGGAAGTTTGCTCCTGGTTGCTACACTCTTGCTGTCTCAGAGGCACTCCCAGAGGAAATGCAGTTCATATGCCAACAAGCACGGGTGCAGTACGTTCCACCCAAACGTATTTGAAACCTTTTGCAGGTTGCAGCAAGTGTCTCCATATTAGCATCTCTGCAAGTCGTCAGTTTCAAGACAACTTAGTCCGATGGAGGTTATGAATGGAAGTAGTTAAGTTTTATGTACTTTGTTTCTGATTTCAACTAATATAGAGAGATTTGATCCTCTTATTGTTATCAAAAACTCTTATTTGATCCGGAAGATAGAGATAGATTACATTTTTTTTTTCAAGTATGGAATGGATTTCTTTTCCTGTGATATTCAGTACATTATTTGAATTACAAAATGAAGAAACTTTAAATTG
CDS Sequence
Protein Sequence