Gene Details:
- Gene ID: AT5G08390
- Gene Symbol: KTN80.3
- Gene Name: Katanin p80 subunit 3
- Description: Transducin/WD40 repeat-like superfamily protein;(source:Araport11)
- TAIR Accession: locus:2150788
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Gene Ontology:
- GO:0005515 — enables — protein binding
- GO:0080008 — part of — Cul4-RING E3 ubiquitin ligase complex
- GO:0051013 — acts upstream of or within — microtubule severing
- GO:0008352 — part of — katanin complex
- GO:0051013 — involved in — microtubule severing
- GO:0007019 — involved in — microtubule depolymerization
- GO:0005634 — located in — nucleus
- GO:0051510 — involved in — regulation of unidimensional cell growth
- GO:0043622 — acts upstream of or within — cortical microtubule organization
- GO:0015630 — located in — microtubule cytoskeleton
Function-related keywords:
Literature:
- Synteny conservation between the Prunus genome and both the present and ancestral Arabidopsis genomes. DOI: 10.1186/1471-2164-7-81 ; PMID: 16615871
- Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases. DOI: 10.1105/tpc.107.055418 ; PMID: 18223036
- Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes. DOI: 10.1105/tpc.108.058891 ; PMID: 18552200
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- KTN80 confers precision to microtubule severing by specific targeting of katanin complexes in plant cells. DOI: 10.15252/embj.201796823 ; PMID: 28978669
- Characterization of Arabidopsis and rice DWD proteins and their roles as substrate receptors for CUL4-RING E3 ubiquitin ligases. DOI: 10.1105/tpc.107.055418 ; PMID: 18223036
- Arabidopsis DDB1-CUL4 ASSOCIATED FACTOR1 forms a nuclear E3 ubiquitin ligase with DDB1 and CUL4 that is involved in multiple plant developmental processes. DOI: 10.1105/tpc.108.058891 ; PMID: 18552200
Sequences:
cDNA Sequence
- >AT5G08390.1
AGAAGAGGTAAGTAAAATAATAAAGCAGCTCCCTTTCTCTCTCTGCTTCCTTGTGTGTGTCTGTGTGTCATTCACATCTCCCTCCTCTCTTCTTCACCATTAGAGGAGAGAAAACACACTTTCAAATATATATATAAGTATAACTCATCCAACAACTCCATTTTTATCTTCTTCGTAAAGGAAACAACGACGTTTACTCCAAGATACTGTTCCTCAATCTGCATTCTTTTCCAATCGATCTAAATTTGGTTTCTGTGCTGAGATTGGCTTTCTGGGTGTTGCTGATTGCAAATTGCTGTTGACAAGCTGAGATCTTAAGGTGCTTTTGCAGTAGCTGAGATTTTTCGAGGTTTTTGTCTGTTCGTGAGTAGAAGAATTTGGATGGTCGCCGATGTAAGGGTTTCGTTTCCGCTATGAACACCAAGCGCGCCTACAAGCTCCAGGAATTTGTGGCACATTCTGCTGCTGTTAATTGTCTTAAGATTGGGAGGAAGTCCTCCAGGGTTCTCGTTACAGGCGGAGAAGATCACAAGGTTAATCTATGGGCTATTGGTAAGCCCAACGCCATCCTGAGCTTGTATGGGCACTCTAGCGGGATTGATTCAGTAACATTTGATGCTTCGGAAGGCTTAGTAGCAGCAGGAGCTGCTAGTGGTACAATTAAACTTTGGGATCTGGAGGAAGCAAAGGTTGTCAGAACTCTCACTGGTCACAGGTCAAACTGCGTATCCGTGAATTTTCACCCTTTTGGTGAGTTTTTTGCTTCTGGTTCTCTAGACACAAATCTCAAGATATGGGATATAAGAAAGAAGGGCTGCATCCATACTTACAAGGGTCACACTAGAGGGGTCAACGTACTCAGATTCACTCCAGATGGTCGTTGGATTGTATCTGGAGGAGAAGATAATGTTGTCAAGGTGTGGGATTTGACTGCTGGAAAACTTTTGCATGAGTTTAAGAGTCATGAAGGGAAAATTCAGAGTCTAGATTTTCATCCCCATGAATTTCTGCTGGCAACAGGTTCAGCTGATAAGACTGTAAAATTCTGGGACCTTGAAACATTCGAGCTTATTGGTTCTGGTGGAACTGAGACTACTGGGGTCCGTTGCCTAACCTTTAATCCAGATGGAAAGAGTGTGCTTTGTGGATTGCAAGAAAGTCTTAAAATTTTCTCATGGGAGCCAATAAGATGTCATGATGGAGTGGATGTTGGATGGTCAAACTTGTCGGATATGAATGTTCACGAGGGAAAGCTTCTCGGTTGCTCATACAATCAAAATTGTGTAGGCGTTTGGGTTGTAGACCTCTCGCGCACTGAGCCTATGAGTGGAGGCGCCACTCAGTCAAATTCTCATCCAGAGAAAACATCAGGCTCAGGCAGAGATCAAGCAGGTCTGAACGATAACAGCTCAAAGGTTATTCTCGGAAAGTTGCCTGGTTCCCAGAAAGTGGATCCTTTATTGAAGGAAACAAAGTCTCTTGGAAAATTATCAGTTTCTCAAAACTCGGATCCGTTGCCAAAAGATACAAAGTCTACTGGAAGGTCATCAGTATCTCAAAGTTCAGATCCTTTGGTAAAGGAACCAAAGCCTCTCGGAAGGTTTTCAGCTACTCACAGCTCAGACACAGTAAAAGAGTCAAGAACCCTGTCATCCACAGGAAGTGTATCAGACTCTCCTCACAGGGTTACTTTGACCAGTGCTCCAAAAAGTGCTTCTGGTATTTCTACAGTTGTCCCTAATGCTGCAGCCTCAAAGAGAAATTTTGGAAAAGCTAACCCAAAGGCGAATCCTCCAGTAGTCAATAAAGAGGATTATTTTCCAGTAATCGTCCCCAGAACGGAGCCAATAATTGAGCAGGCATCTGAATCCAGAGCAGAACTTGACATTATCGGAAGAACTATGCCATATTCGCTGCAGTCAAAGGCCGCTGATTCTCGAAGGCTGTCGAGCAGCAGAAATGAGCCAGATCTACCAACCAGTTCGCTTCTTGAAAGGTCTCAGTCTCAACCTATAGAACCAATCACTTTACAAGATGGGAATACATATCCTAGTGACGAAGGTGGCTCCTGGGATACAGCTGAGAGAACAAATAAAGAGAGCAAATGCAGGGTATTTGGAAGGTTTAATTCAAGATCACTGGTGAGATCACCTCCGAGAAATCACGACGAAAACTCTGACTTGATTAGCTATAATGCAAATAGAGATTCAAGTCCTACTGAAAGCCGAAAAGGAGGAAGACTGCATTCCCTCGTTCTAAATAGGGAAAGAAGAGGAAGATTTTCTAACTTTGAGGGTCCTGTTTCGAGTTCTTCTGGTGGAAATATGACTGCACCAAACAGTCGCCCTTCCAATATGCTCAAGCAGAGAGGAAATCATGTGCCAGTTGATCAAGGAATCACTTCAGCTAGCGAAGAAGATATAGTTGCAGACATAATGGGGCAACACGATCAATTTGTCAGCTCTATGCACTCTCGTTTGGCTAAGTTACAGGTCGTCCGTAGATATTGGGAAAGAAATGATATTAAAAACTCGATAAGTTCAATAGAGAAGATGGCTGATAATGCTGTAATTGCGGATGTACTACTTATAGTAAACGAGAGACCTGAGATTTTGACACTGGATACCTGTACCTCTCTTCTCCCCCTTTTGACAGCTCTTCTAGGGAGCAACATGGATAGTCATTTGAGTGTCTGCCTTGATTTGCTGCTTAAGCTGGTAAGAATGTATGGGTCACAAATTTACTCGTCGCTTTCCGCTCCCTCATCTGTTGGTGTAGATATTGAGGCTGAGCAAAGGATGGAGCGGTACAGTTGTTGCTTTGTCGAGTTCGAGAAAATCAAGGCTTGCCTTCCCTCTTTAGCAAGAAGAGGAAATTTGGTGGCCAAGACTCTCCATGAACTCAACTTAACATTTCAAGAAGTTTCATCGTGATACTTTTTGGATGTGGATTTGGTTCCAATGTGGAGTTTAACAGTACTAAAGCCTAACTCTACCAAGCTAACCAATAGAGTCTATGGAAGACTAACTAACCCTCGCGTATTGCGTATGGCCACTGCTCGGGTCCGTAACCTTTGCCTTGCGTATGGATACGGTACTGTCTCTCGTTTCAAGCTAACTTGGTGTGTAAAGAGCCATTTCGGTTGTTGTATTGATCTAGGTTATCATTTCTTCCACACTGTTTAGCTATTTGTTCTTAAGAGCACAAAAAAGAAGCCTATATTTAACAAAACTGTTTTGTAGAAGATTCAGATCTTGAAGTACTTATACCCAAAATCAGGATTTGTCATTCCCTCT
CDS Sequence
Protein Sequence