Information report for AT5G08070
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000056 — flower bud — floral bud (exact), yema floral (Spanish, exact), 花芽 (Japanese, exact)
- PO:0009001 — fruit — frucht (exact, German), fruto (exact, Spanish), 果実 (exact, Japanese), coenocarp (narrow), syncarp (narrow), aggregate fruit (broad), compound fruit (broad), dehiscent fruit (broad), diaspore (broad), indehiscent fruit (broad), multiple fruit (broad), propagule (broad)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009046 — flower — flor (Spanish, exact), 花 (Japanese, exact), floret (related), Asteraceae floret (narrow), basal flower (narrow), double flower (narrow), hermaphrodite flower (narrow), monoclinous flower (narrow), perfect flower (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
- PO:0020030 — cotyledon — cotiledón (Spanish, exact), seed leaf (exact), 子葉 (Japanese, exact)
- GO:0005634 — located in — nucleus
- GO:0005515 — enables — protein binding
- GO:0009965 — acts upstream of or within — leaf morphogenesis
- GO:0048366 — acts upstream of or within — leaf development
- GO:0003700 — enables — DNA-binding transcription factor activity
- GO:0045962 — acts upstream of or within — positive regulation of development, heterochronic
- GO:0006355 — acts upstream of or within — regulation of DNA-templated transcription
- GO:0030154 — acts upstream of or within — cell differentiation
- GO:0005634 — is active in — nucleus
- GO:0010150 — acts upstream of or within — leaf senescence
- GO:0043565 — enables — sequence-specific DNA binding
- SALK_147288 — Homozygotes have a WT phenotype
- tcp5 tcp13 tcp17 — Shorter petiole length under 28C.
Functional Keywords
- root , flower bud , fruit , root , vascular leaf , flower , stem , cotyledon
Literature and News
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Inactivation of the chloroplast ATP synthase gamma subunit results in high non-photochemical fluorescence quenching and altered nuclear gene expression in Arabidopsis thaliana. DOI: 10.1074/jbc.M308435200 ; PMID: 14576160
- An indole-3-acetic acid carboxyl methyltransferase regulates Arabidopsis leaf development. DOI: 10.1105/tpc.105.034959 ; PMID: 16169896
- Diversity and evolution of CYCLOIDEA-like TCP genes in relation to flower development in Papaveraceae. DOI: 10.1104/pp.106.090324 ; PMID: 17189327
- TCP transcription factors control the morphology of shoot lateral organs via negative regulation of the expression of boundary-specific genes in Arabidopsis. DOI: 10.1105/tpc.106.044792 ; PMID: 17307931
- A protracted and dynamic maturation schedule underlies Arabidopsis leaf development. DOI: 10.1105/tpc.107.057521 ; PMID: 18805992
- Roles of miR319 and TCP Transcription Factors in Leaf Development. DOI: 10.1104/pp.17.00732 ; PMID: 28842549
- Novel functions of the Arabidopsis transcription factor TCP5 in petal development and ethylene biosynthesis. DOI: 10.1111/tpj.13904 ; PMID: 29570883
- Alterations of plant architecture and phase transition by the phytoplasma virulence factor SAP11. DOI: 10.1093/jxb/ery318 ; PMID: 30165491
- Arabidopsis Transcription Factor TCP5 Controls Plant Thermomorphogenesis by Positively Regulating PIF4 Activity. DOI: 10.1016/j.isci.2019.04.005 ; PMID: 31078552
- TCP Transcription Factors Associate with PHYTOCHROME INTERACTING FACTOR 4 and CRYPTOCHROME 1 to Regulate Thermomorphogenesis in Arabidopsis thaliana. DOI: 10.1016/j.isci.2019.04.002 ; PMID: 31078553
- TCP transcription factors suppress cotyledon trichomes by impeding a cell differentiation-regulating complex. DOI: 10.1093/plphys/kiab053 ; PMID: 33576799
- An Expanding Portfolio. DOI: 10.3389/fpls.2022.825341 ; PMID: 35273626
- Arabidopsis transcription factor TCP4 represses chlorophyll biosynthesis to prevent petal greening. DOI: 10.1016/j.xplc.2022.100309 ; PMID: 35605201
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- TCP transcription factors control the morphology of shoot lateral organs via negative regulation of the expression of boundary-specific genes in Arabidopsis. DOI: 10.1105/tpc.106.044792 ; PMID: 17307931
Gene Resources
Sequences
cDNA Sequence
- >AT5G08070.1
CAACCATATGTTATATTATACACTTTTAGTTTTAGATAACGAGAGAGAATAAATTATAACTGTTCATCATCTCGGTTCTTATCATTTTCCTCAACCTACGTGACAAAGAACTCACTCGATCTGTCTAAACCCAACGACTTCGTCAAGCTTACCAGTTTTTCTGTATCGACAGAGGACATGGGAATAAAAAAAGAAGATCAGAAAAGTTCCTTGTCCTTGTTGACGCAACGATGGAATAATCCGAGGATCGTGCGAGTCTCCCGAGCATTTGGAGGCAAAGATAGACACAGCAAAGTGTGCACAGTTCGTGGTCTCCGAGACAGGAGGATAAGGTTGTCGGTGATGACAGCGATCCAAGTCTACGACCTTCAAGAACGATTAGGGCTGAGTCAGCCTAGCAAAGTCATTGATTGGCTCTTAGAAGTTGCCAAAAACGACGTCGATTTGCTTCCTCCTTTGCAATTCCCACCTGGTTTTCACCAACTTAACCCTAATCTCACCGGCCTTGGAGAATCTTTTCCCGGGGTCTTCGATCTTGGAAGAACACAGAGAGAAGCTTTGGATCTTGAGAAAAGGAAATGGGTTAATCTTGATCATGTGTTTGATCACATCGATCATCACAACCATTTCTCGAATTCAATCCAGAGCAACAAGCTTTATTTCCCTACAATTACTTCGTCTAGCAGCTCTTATCACTACAACCTTGGACATCTCCAACAGTCACTACTAGACCAATCTGGTAACGTCACTGTCGCATTTTCTAATAACTATAATAATAATAATCTCAATCCTCCGGCGGCGGAAACTATGAGTTCTCTATTCCCAACAAGGTACCCTTCGTTTCTCGGTGGTGGTCAACTTCAACTCTTTAGTAGCACAAGCTCACAACCAGACCATATCGAGTAGTTCCAGCTGCAGATTATTTTTAGACGATCTTTAACAAGTTGAAGAATTCAAGTCATGTGACATGTAAGGCATTTACTATATGTACATAGAGAGAGGGAGATTTATATGGTTTAATGGTTATTGTTGGATTGATTAATCGTCACATGCGTGTATTTATAGTAGACAGTCTTATTAAAGATTATATAATAGACGCCAAATCTGATGCGAGCAAAGGTACATATTCATAATTCATGTTGTGATTGAGTTGGTAGAATATCTAATTCATTGTACCGCTACAATCAATATAAATAATATCTCTCATACAAACTTTTCACATTTGTATGTAAAGTTTGTAGTGCCTAAATATGCTATAACACAGGCCTCATTGCACGCCAAACCCTAGCTTGTACTCATATGTCCACAACCACATGCATGTGTAGTAT - >AT5G08070.2
CAACCATATGTTATATTATACACTTTTAGTTTTAGATAACGAGAGAGAATAAATTATAACTGTTCATCATCTCGGTTCTTATCATTTTCCTCAACCTACGTGACAAAGAACTCACTCGATCTGTCTAAACCCAACGACTTCGTCAAGCTTACCAGTTTTTCTGTATCGACAGAGGACATGGGAATAAAAAAAGAAGATCAGAAAAGTTCCTTGTCCTTGTTGACGCAACGATGGAATAATCCGAGGATCGTGCGAGTCTCCCGAGCATTTGGAGGCAAAGATAGACACAGCAAAGTGTGCACAGTTCGTGGTCTCCGAGACAGGAGGATAAGGTTGTCGGTGATGACAGCGATCCAAGTCTACGACCTTCAAGAACGATTAGGGCTGAGTCAGCCTAGCAAAGTCATTGATTGGCTCTTAGAAGTTGCCAAAAACGACGTCGATTTGCTTCCTCCTTTGCAATTCCCACCTGGTTTTCACCAACTTAACCCTAATCTCACCGGCCTTGGAGAATCTTTTCCCGGGGTCTTCGATCTTGGAAGAACACAGAGAGAAGCTTTGGATCTTGAGAAAAGGAAATGGGTTAATCTTGATCATGTGTTTGATCACATCGATCATCACAACCATTTCTCGAATTCAATCCAGAGCAACAAGCTTTATTTCCCTACAATTACTTCGTCTAGCAGCTCTTATCACTACAACCTTGGACATCTCCAACAGTCACTACTAGACCAATCTGGTAACGTCACTGTCGCATTTTCTAATAACTATAATAATAATAATCTCAATCCTCCGGCGGCGGAAACTATGAGTTCTCTATTCCCAACAAGGTACCCTTCGTTTCTCGGTGGTGGTCAACTTCAACTCTTTAGTAGCACAAGCTCACAACCAGACCATATCGAGTAGTTCCAGCTGCAGATTATTTTTAGACGATCTTTAACAAGTTGAAGAATTCAAGTCATGTGACATGTAAGGCATTTACTATATGTACATAGAGAGAGGGAGATTTATATGGTTTAATGGTTATTGTTGGATTGATTAATCGTCACATGCGTGTATTTATAGTAGACAGTCTTATTAAAGATTATATAATAGACGCCAAATCTGATGCGAGCAAAGGTACATATTCATAATTCATGTTGTGATTGAGTTGGTAGAATATCTAATTCATTGTACCGCTACAATCAATATAAATAATATCTCTCATACAAACTTTTCACATTTGTATGTAAAGTTTGTAGTGCCTAAATATGCTATAACACAGGCCTCATTGCACGCCAAACCCTAGCTTGTACTCATATGTCCACAACCACATGCATGTGTAGTAT
CDS Sequence
Protein Sequence