Information report for AT5G07830
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0009025 — vascular leaf — foliage leaf (exact), hoja vascular (Spanish, exact), leaf, vascular (exact), vascular leaves (exact, plural), 維管束のある葉, または維管束植物の葉 (Japanese, exact), crozier (related), macrophyll (related), megaphyll (related), ascidia (narrow), ascidium (narrow), fiddlehead (narrow), frond (narrow), needle-like leaf (narrow), pitcher (narrow), pitcher blade (narrow), pitcher-blade (narrow), scale-like leaf (narrow), sterile frond (narrow), trophophyll (narrow)
- PO:0009047 — stem — caña (Spanish, exact), culm (exact), eje primario (Spanish, exact), primary axis (exact), primary stem (exact), tallo (Spanish, exact), tronco (Spanish, exact), 茎 (Japanese, exact), bole (narrow), cane (narrow), caudex (narrow), caudices (narrow), core (narrow), primocane (narrow), scape (narrow), stalk (narrow), trunk (narrow)
Functional Keywords
- root , root , vascular leaf , stem
Literature and News
- Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. DOI: 10.1002/pmic.200400882 ; PMID: 15593128
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- Characterization of Arabidopsis AtUGT85A and AtGUS gene families and their expression in rapidly dividing tissues. DOI: 10.1016/j.ygeno.2007.03.014 ; PMID: 17498920
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Cell wall proteins in apoplastic fluids of Arabidopsis thaliana rosettes: identification by mass spectrometry and bioinformatics. DOI: 10.1002/pmic.200400882 ; PMID: 15593128
- Arabidopsis cell wall proteome defined using multidimensional protein identification technology. DOI: 10.1002/pmic.200500046 ; PMID: 16287169
- A sub-proteome of Arabidopsis thaliana mature stems trapped on Concanavalin A is enriched in cell wall glycoside hydrolases. DOI: 10.1093/jxb/erm082 ; PMID: 17526915
Gene Resources
- UniProt: A0A654FZP1
- EMBL: CACRSJ010000110, CACSHJ010000096
- AlphaFoldDB: A0A654FZP1
- EnsemblPlants: AT5G07830.1
- Gramene: AT5G07830.1
- KEGG: ath:AT5G07830
- Orthologous matrix: YMRGSIT
- ExpressionAtlas: AT5G07830
- InterPro: IPR005199, IPR017853
- PANTHER: PTHR14363, PTHR14363:SF21
- SUPFAM: SSF51445
- Gene3D: 3.20.20.80
- OrthoDB: A0A654FZP1
- SWISS-MODEL: A0A654FZP1
Sequences
cDNA Sequence
- >AT5G07830.1
CCAAAATCAATTAACGAGAATAAAAAGGAATTAACGAATAAAAAGTGGTAGAAAGCTCATGTTTCAAGAGAAGGTTTTGATTCATCAACCAAGTTGCACCAACTCCATATATATTACCAAAACCAAAATAAATTTACATATTTGGAAAGAACATAAATTGGACAGAACATATCAAGCATGTAATATACAGAAGCCGACAAATTGCAAAATTTACCTAAACCCCATCTTACACCACCGTCAGATTCTGATGTAAGTATTATCAAAGCTCAAGAACAATCACATCATCAGAATCTAACTTATATATCAAAGGTCCAGAATTTTCTCCATTGAAGCTGGATTCTAAGGAAAGTTATCAAAAGTTTTGAGAGCTTTGGATAGTGAAGCTCAAAGAACTAAACAATGGGCTTCAGAGTTTGTGTTATTGTCGTCTTCTTGGGTTGTCTTCTTCTAGTCCCTGAGAAAACAATGGCTCAAGAAATGAAACGTGCATCGATCGTTATCCAAGGAGCTCGACGAGTTTGTGAGACCGATGAGAACTTTGTCTGTGCGACATTGGACTGGTGGCCTCATGACAAGTGCAACTATGACCAATGTCCTTGGGGTTACTCTTCAGTTATCAATATGGATTTAACGCGTCCCCTTCTTACTAAAGCTATTAAAGCTTTCAAGCCGTTGAGGATAAGAATTGGTGGTTCGCTGCAAGATCAAGTTATTTACGACGTAGGAAATCTCAAAACTCCTTGCCGTCCATTCCAAAAAATGAACAGCGGTTTGTTTGGATTCTCTAAAGGATGCTTGCACATGAAACGATGGGACGAGCTCAACAGTTTCCTAACCGCAACCGGAGCGGTAGTGACATTCGGTTTAAACGCTTTGCGTGGGAGACACAAACTCCGCGGAAAGGCGTGGGGTGGTGCATGGGATCACATAAACACTCAAGATTTCTTAAACTACACAGTCTCGAAGGGTTACGTTATTGATTCTTGGGAATTCGGAAACGAGCTGAGTGGAAGCGGAGTTGGTGCGAGCGTGAGCGCAGAGCTTTACGGGAAAGACTTGATTGTACTTAAAGATGTAATCAACAAAGTTTATAAAAATTCTTGGTTACACAAGCCTATACTTGTCGCTCCTGGAGGGTTCTATGAACAACAATGGTACACCAAACTTCTTGAAATTTCCGGTCCTAGTGTTGTCGACGTTGTGACTCATCATATATACAATCTTGGTTCAGGAAATGATCCCGCGCTGGTGAAGAAGATAATGGATCCGAGTTATTTAAGCCAGGTATCAAAAACATTCAAGGACGTGAACCAGACGATTCAAGAACATGGACCGTGGGCTTCTCCTTGGGTTGGAGAATCTGGTGGAGCTTACAATAGTGGTGGCCGTCATGTTTCTGACACATTCATAGATAGCTTCTGGTATCTAGATCAGCTTGGAATGTCAGCGAGACACAACACTAAAGTTTACTGCAGACAGACTTTGGTTGGAGGGTTTTACGGCTTGCTCGAAAAGGGAACGTTTGTTCCAAATCCTGATTACTATAGCGCGCTGCTTTGGCATCGTTTAATGGGAAAAGGGGTTCTTGCGGTGCAGACAGATGGACCGCCACAGCTACGGGTTTACGCACATTGTTCAAAAGGAAGAGCCGGTGTGACATTGCTACTGATAAATCTAAGCAATCAATCGGATTTTACGGTTAGTGTCAGCAATGGCATAAACGTGGTTTTGAATGCGGAATCAAGGAAGAAGAAGTCATTGTTGGATACTTTAAAAAGACCATTTTCTTGGATTGGAAGCAAAGCTTCTGATGGATATTTGAATAGAGAAGAGTATCATCTGACACCAGAAAACGGTGTGTTGCGCAGCAAAACAATGGTCTTGAATGGTAAATCGTTAAAACCGACGGCAACAGGAGATATCCCGAGCCTTGAACCGGTCCTCCGTAGTGTGAACTCTCCGCTTAATGTCTTGCCATTGTCGATGTCGTTCATTGTGTTACCTAATTTTGATGCTTCTGCTTGTTCATGATGTTAATGGGGTCTCTCTTTGCTTATTGGGAAAAAATAAATAAAAATAAAGAATAGTTGTAATTTTTTTGGTAATTGTATCTAATGCTGGTGATAAATGTATCATTTCATATTTCAATACA
CDS Sequence
Protein Sequence