Information report for AT5G07090
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000293 — guard cell — célula guardiana (Spanish, exact), occlusive cell (exact), 孔辺細胞 (Japanese, exact)
Functional Keywords
Literature and News
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence. DOI: 10.1093/pcp/pcj043 ; PMID: 16621846
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- Quantitative proteomics of a chloroplast SRP54 sorting mutant and its genetic interactions with CLPC1 in Arabidopsis. DOI: 10.1104/pp.108.124545 ; PMID: 18633119
- Differential phosphorylation of ribosomal proteins in Arabidopsis thaliana plants during day and night. DOI: 10.1371/journal.pone.0029307 ; PMID: 22195043
- Endogenous Arabidopsis messenger RNAs transported to distant tissues. DOI: 10.1038/nplants.2015.25 ; PMID: 27247031
- Discovering the RNA-Binding Proteome of Plant Leaves with an Improved RNA Interactome Capture Method. DOI: 10.3390/biom10040661 ; PMID: 32344669
- Plant cytoplasmic ribosomal proteins: an update on classification, nomenclature, evolution and resources. DOI: 10.1111/tpj.15667 ; PMID: 35000252
- An updated nomenclature for plant ribosomal protein genes. DOI: 10.1093/plcell/koac333 ; PMID: 36423343
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence. DOI: 10.1093/pcp/pcj043 ; PMID: 16621846
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
- The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. DOI: 6834 ; PMID: 11598216
- High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. DOI: 10.1007/s11103-005-0699-3 ; PMID: 15821981
- Expression profiling of auxin-treated Arabidopsis roots: toward a molecular analysis of lateral root emergence. DOI: 10.1093/pcp/pcj043 ; PMID: 16621846
- The Arabidopsis thaliana transcriptome in response to Agrobacterium tumefaciens. DOI: 10.1094/MPMI-19-0665 ; PMID: 16776300
- A proteomics dissection of Arabidopsis thaliana vacuoles isolated from cell culture. DOI: 10.1074/mcp.M600250-MCP200 ; PMID: 17151019
- Analysis of the Arabidopsis cytosolic ribosome proteome provides detailed insights into its components and their post-translational modification. DOI: 10.1074/mcp.M700052-MCP200 ; PMID: 17934214
- Analysis of the Arabidopsis cytosolic proteome highlights subcellular partitioning of central plant metabolism. DOI: 10.1021/pr1009433 ; PMID: 21166475
Gene Resources
- UniProt: A0A178UFG0
- EMBL: LUHQ01000005
- AlphaFoldDB: A0A178UFG0
- EnsemblPlants: AT5G07090.1
- Gramene: AT5G07090.1
- KEGG: ath:AT5G07090
- Orthologous matrix: DIVHMKD
- ExpressionAtlas: AT5G07090
- InterPro: IPR000876, IPR005824, IPR013843
- PANTHER: PTHR11581, PTHR11581:SF0
- PROSITE: PS00528, PS50889
- Gene3D: 2.30.30.30, 2.40.50.740, 3.10.290.10
- SWISS-MODEL: A0A178UFG0
- Conserved Domain Database: cd00165, cd06087
Sequences
cDNA Sequence
- >AT5G07090.1
GGGCGCCGTTAATCGCAGCCTCAGTGGAAACAGAGCAGCTGCAAACATGGCAAGAGGATTGAAGAAGCATCTAAAGAGGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTTGGTGGTGCCTTCGCTCCCAAACCATCTTCTGGACCTCACAAGTCGAGGGAGTGTCTTCCTCTTGTCCTGATCATCAGGAACAGGTTGAAGTATGCTTTGACTTACCGTGAAGTTATCTCTATCTTGATGCAAAGGCATATCCAAGTTGATGGCAAAGTCAGGACTGACAAGACTTACCCTGCTGGTTTCATGGATGTTGTATCCATCCCCAAGACCAATGAGAACTTCCGTCTTCTCTACGACACCAAGGGACGTTTCCGTCTCCACTCCATCAAGGATGAGGAAGCAAAGTTCAAGCTTTGCAAGGTTAGATCTATCCAGTTTGGTCAGAAGGGAATTCCATACCTGAACACTTATGATGGTCGCACCATCCGTTACCCTGACCCGCTCATCAAGCCAAATGACACCATCAAGCTGGACCTTGAGGAGAACAAGATTGTTGAGTTCATCAAGTTTGACGTGGGTAACGTTGTGATGGTGACTGGAGGCAGAAACAGAGGGCGTGTGGGTGTGATTAAGAACCGTGAAAAGCATAAGGGAAGCTTTGAGACAATCCACATTCAAGACTCAACAGGGCATGAGTTTGCCACAAGGTTGGGGAATGTGTACACAATCGGCAAAGGAACAAAGCCATGGGTGTCTCTTCCAAAGGGCAAAGGTATTAAGCTGACCATCATTGAGGAAGCCAGGAAGAGACTTGCTTCCCAGCAAGCTGCTTGAAAGTCCAACTGCTTTGAATCATCAAGACCCGTTTCTTTTACAGACTCGCTGCTTGTCTCAGTTTGTGAGTCTATTTCTTTTCTTATGTTGTTGGATTTCAAAACCCATCAAAAAATAGCTGAGTAGTGCTTTTTGTAATGTTTGTATGGTGGATTTTTTGGTGATTTACCGTTTAAATCAGATGACAGTTGGTCCACTCCTTTGCTTAGTCTTCTCCTTTGCTTTGCGCTATTAGTTGTTGAGAGATGAGTAATAGATATTATTTTCTTGGCATTAAGTAATCTAGAAGAAGACCTCAAGGACTCCTGAAAGTGATGTGAATTCAGCCGCCTTACACAAAAAAGT - >AT5G07090.2
GGGCGCCGTTAATCGCAGCCTCAGTGGAAACAGAGCAGCTGCAAACATGGCAAGAGGATTGAAGAAGCATCTAAAGAGGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTTGGTGGTGCCTTCGCTCCCAAACCATCTTCTGGACCTCACAAGTCGAGGGAGTGTCTTCCTCTTGTCCTGATCATCAGGAACAGGTTGAAGTATGCTTTGACTTACCGTGAAGTTATCTCTATCTTGATGCAAAGGCATATCCAAGTTGATGGCAAAGTCAGGACTGACAAGACTTACCCTGCTGGTTTCATGGATGTTGTATCCATCCCCAAGACCAATGAGAACTTCCGTCTTCTCTACGACACCAAGGGACGTTTCCGTCTCCACTCCATCAAGGATGAGGAAGCAAAGTTCAAGCTTTGCAAGGTTAGATCTATCCAGTTTGGTCAGAAGGGAATTCCATACCTGAACACTTATGATGGTCGCACCATCCGTTACCCTGACCCGCTCATCAAGCCAAATGACACCATCAAGCTGGACCTTGAGGAGAACAAGATTGTTGAGTTCATCAAGTTTGACGTGGGTAACGTTGTGATGGTGACTGGAGGCAGAAACAGAGGGCGTGTGGGTGTGATTAAGAACCGTGAAAAGCATAAGGGAAGCTTTGAGACAATCCACATTCAAGACTCAACAGGGCATGAGTTTGCCACAAGGTTGGGGAATGTGTACACAATCGGCAAAGGAACAAAGCCATGGGTGTCTCTTCCAAAGGGCAAAGGTATTAAGCTGACCATCATTGAGGAAGCCAGGAAGAGACTTGCTTCCCAGCAAGCTGCTTGAAAGTCCAACTGCTTTGAATCATCAAGACCCGTTTCTTTTACAGACTCGCTGCTTGTCTCAGTTTGTGAGTCTATTTCTTTTCTTATGTTGTTGGATTTCAAAACCCATCAAAAAATAGCTGAGTAGTGCTTTTTGTAATGTTTGTATGGTGGATTTTTTGGTGATTTACCGTTTAAATCAGATGACAGTTGGTCCACTCCTTTGCTTAGTCTTCTCCTTTGCTTTGCGCTATTAGTTGTTGAGAGATGAGTAATAGATATTATTTTCTTGGCATTAAGTAATCTAGAAGAAGACCTCAAGGACTCCTGAAAGTGATGTGAATTCAGCCGCCTTACACAAAAAAGT - >AT5G07090.3
GGGCGCCGTTAATCGCAGCCTCAGTGGAAACAGAGCAGCTGCAAACATGGCAAGAGGATTGAAGAAGCATCTAAAGAGGCTCAATGCTCCTAAGCATTGGATGCTTGACAAACTTGGTGGTGCCTTCGCTCCCAAACCATCTTCTGGACCTCACAAGTCGAGGGAGTGTCTTCCTCTTGTCCTGATCATCAGGAACAGGTTGAAGTATGCTTTGACTTACCGTGAAGTTATCTCTATCTTGATGCAAAGGCATATCCAAGTTGATGGCAAAGTCAGGACTGACAAGACTTACCCTGCTGGTTTCATGGATGTTGTATCCATCCCCAAGACCAATGAGAACTTCCGTCTTCTCTACGACACCAAGGGACGTTTCCGTCTCCACTCCATCAAGGATGAGGAAGCAAAGTTCAAGCTTTGCAAGGTTAGATCTATCCAGTTTGGTCAGAAGGGAATTCCATACCTGAACACTTATGATGGTCGCACCATCCGTTACCCTGACCCGCTCATCAAGCCAAATGACACCATCAAGCTGGACCTTGAGGAGAACAAGATTGTTGAGTTCATCAAGTTTGACGTGGGTAACGTTGTGATGGTGACTGGAGGCAGAAACAGAGGGCGTGTGGGTGTGATTAAGAACCGTGAAAAGCATAAGGGAAGCTTTGAGACAATCCACATTCAAGACTCAACAGGGCATGAGTTTGCCACAAGGTTGGGGAATGTGTACACAATCGGCAAAGGAACAAAGCCATGGGTGTCTCTTCCAAAGGGCAAAGGTATTAAGCTGACCATCATTGAGGAAGCCAGGAAGAGACTTGCTTCCCAGCAAGCTGCTTGAAAGTCCAACTGCTTTGAATCATCAAGACCCGTTTCTTTTACAGACTCGCTGCTTGTCTCAGTTTGTGAGTCTATTTCTTTTCTTATGTTGTTGGATTTCAAAACCCATCAAAAAATAGCTGAGTAGTGCTTTTTGTAATGTTTGTATGGTGGATTTTTTGGTGATTTACCGTTTAAATCAGATGACAGTTGGTCCACTCCTTTGCTTAGTCTTCTCCTTTGCTTTGCGCTATTAGTTGTTGAGAGATGAGTAATAGATATTATTTTCTTGGCATTAAGTAATCTAGAAGAAGACCTCAAGGACTCCTGAAAGTGATGTGAATTCAGCCGCCTTACACAAAAAAGT
CDS Sequence
Protein Sequence