Information report for AT5G06980
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- Karrikins enhance light responses during germination and seedling development in Arabidopsis thaliana. DOI: 10.1073/pnas.0911635107 ; PMID: 20351290
- LNK genes integrate light and clock signaling networks at the core of the Arabidopsis oscillator. DOI: 10.1073/pnas.1302170110 ; PMID: 23818596
- LNK1 and LNK2 are transcriptional coactivators in the Arabidopsis circadian oscillator. DOI: 10.1105/tpc.114.126573 ; PMID: 25012192
Gene Resources
- UniProt: A0A178UDB0
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UDB0
- ExpressionAtlas: AT5G06980
- InterPro: IPR039928
- PANTHER: PTHR33334, PTHR33334:SF10
- OrthoDB: A0A178UDB0
Sequences
cDNA Sequence
- >AT5G06980.1
AAGAGAGTGAGAGCCTGAGAGGAACATTATCCACTGCATCCCCATGAGACCATGGGTCCCACTCCACCGCAAAACAGTCTGTCACGTGTCATCACCTCCCTATACCTACAGGACACGTGTCTACACCAAATCGAGTGAACATGTGACGTGTCGTCACCAAACCTGAGCCGCTAACCACTGCCTGATCTGGAGGGTATATCCGTAACTTAAAATCCTTTTGTCGTCTACCCGTAAACAGACAACTTTTAAGAACTACAAAAACGTACAAGTTGGCCAGTTGTGTCTTGCAAGATTTAATTAATTTTAATTCAAGTGCCGACCTCACACAGAAAAAGATATGTTTAACACGTGGACCAATGAAAGAGTTGCTTTAGATGGAGGAGTAATCTAAGCCACAAATCTCGTTTGTGAATTCTAAGCCACTAACTAAAGTTCAAACTCACGCGCTCTCCACTTCCTCTCTTCAACTTGCTTCTTTGTCTTCTCTCTCTTTCCTCCTTCGCACTCACAAATCTACAGAAGATAGAAGAAGATAGACTCATAATCTTTTGGATTTGGATTTAGATCTGATCATAAAGGTTAAAGTATCATTCATGGATCGTTATTCGAGGAGGAATTTAGAGGATCTTGTTGTGCCTAACTATCAAGAGACATCAGATTCGTACCCTTCTCCTGATATGTGGGGTACTGGATGGAGCATGAACTCTTCAGAAGCTGCTGAGAAATGTTTTGATTATGATGTGATTCACAATGGTTTCAGTGGAGGATTATACAGTCAGATGGAGATGGATATGGGAACTAGTGAACAAGTAGAAGAAGAAACTAAGAAGTTAAAGGCTAGTGGTTGTTTTGACCGTTCGCTTCATGATTTTGATGAAATCCAACACATGGATGACATGTTCTTAAGTTCCATTTTGGAGGATGTTCCAGGGAATGAGAATTTTCTTTCTTTCAAGGAGTCGGATAATAACAACAGCTCCAGTTCCTCCTATCTCGACACAACTGATGGCAGGGAAGTCCCTTTGTTCCATTACAACTGGGAAACTTGTCAAGATATGCCACTTATGGAGGAGGATGCACCTATGAATCTGTGTGAGGAGAACAAGGAGGAGGCATCTGCTGAAGAAGTTGTGTTGCAGGATCTACAAAGGGCTACAGAAATGTTGACTGATGATACCCGCAAGTGCTTCCGCGATACCTTTTACCGGCTTGCAAAGAACTCACAACAGAAGTCAGACTCCAACTCGGATGAGTTCCTTGAGGATAGAACCAGTAGGGAAACTGAATTTGAAACCAAACTCAATCGACAGAGCCGTGGCCAATCTCACATTCAACAAGATGGAATCCAACATGAGAAATATGCCTCCACCGAAGAGACTTTCTTCTGTTCAAGGATAAGAGAGTTTCATCATATTTGGTAATACCATATGTGTATATAATATATATGTGTGTGTGTATGTGTGCTTGGCTTGACTTTTTCCAAGCTTCAGTTTTGATCTGTTTCATTAGACTCTGACTCTGCTTCTGGATTTCCAATTTCTTATGCTATATGTTATTTACCGAGTGAACCTGTGAATGTACATTACCCCATGTAGAATCTGTTGTTTCAATGTATCAAAAAAGATATTCTTCAGACCTTTTGTTAATTTGTTGATAAGAGGAGACACAGAAACATATCTAAGTGGGAAACGACCTTGGGAAACAGCAAAGCAGAGGAATTAGTCT - >AT5G06980.3
AAGAGAGTGAGAGCCTGAGAGGAACATTATCCACTGCATCCCCATGAGACCATGGGTCCCACTCCACCGCAAAACAGTCTGTCACGTGTCATCACCTCCCTATACCTACAGGACACGTGTCTACACCAAATCGAGTGAACATGTGACGTGTCGTCACCAAACCTGAGCCGCTAACCACTGCCTGATCTGGAGGGTATATCCGTAACTTAAAATCCTTTTGTCGTCTACCCGTAAACAGACAACTTTTAAGAACTACAAAAACGTACAAGTTGGCCAGTTGTGTCTTGCAAGATTTAATTAATTTTAATTCAAGTGCCGACCTCACACAGAAAAAGATATGTTTAACACGTGGACCAATGAAAGAGTTGCTTTAGATGGAGGAGTAATCTAAGCCACAAATCTCGTTTGTGAATTCTAAGCCACTAACTAAAGTTCAAACTCACGCGCTCTCCACTTCCTCTCTTCAACTTGCTTCTTTGTCTTCTCTCTCTTTCCTCCTTCGCACTCACAAATCTACAGAAGATAGAAGAAGATAGACTCATAATCTTTTGGATTTGGATTTAGATCTGATCATAAAGGTTAAAGTATCATTCATGGATCGTTATTCGAGGAGGAATTTAGAGGATCTTGTTGTGCCTAACTATCAAGAGACATCAGATTCGTACCCTTCTCCTGATATGTGGGGTACTGGATGGAGCATGAACTCTTCAGAAGCTGCTGAGAAATGTTTTGATTATGATGTGATTCACAATGGTTTCAGTGGAGGATTATACAGTCAGATGGAGATGGATATGGGAACTAGTGAACAAGTAGAAGAAGAAACTAAGAAGTTAAAGGCTAGTGGTTGTTTTGACCGTTCGCTTCATGATTTTGATGAAATCCAACACATGGATGACATGTTCTTAAGTTCCATTTTGGAGGATGTTCCAGGGAATGAGAATTTTCTTTCTTTCAAGGAGTCGGATAATAACAACAGCTCCAGTTCCTCCTATCTCGACACAACTGATGGCAGGGAAGTCCCTTTGTTCCATTACAACTGGGAAACTTGTCAAGATATGCCACTTATGGAGGAGGATGCACCTATGAATCTGTGTGAGGAGAACAAGGAGGAGGCATCTGCTGAAGAAGTTGTGTTGCAGGATCTACAAAGGGCTACAGAAATGTTGACTGATGATACCCGCAAGTGCTTCCGCGATACCTTTTACCGGCTTGCAAAGAACTCACAACAGAAGTCAGACTCCAACTCGGATGAGTTCCTTGAGGATAGAACCAGTAGGGAAACTGAATTTGAAACCAAACTCAATCGACAGAGCCGTGGCCAATCTCACATTCAACAAGATGGAATCCAACATGAGAAATATGCCTCCACCGAAGAGACTTTCTTCTGTTCAAGGATAAGAGAGTTTCATCATATTTGGTAATACCATATGTGTATATAATATATATGTGTGTGTGTATGTGTGCTTGGCTTGACTTTTTCCAAGCTTCAGTTTTGATCTGTTTCATTAGACTCTGACTCTGCTTCTGGATTTCCAATTTCTTATGCTATATGTTATTTACCGAGTGAACCTGTGAATGTACATTACCCCATGTAGAATCTGTTGTTTCAATGTATCAAAAAAGATATTCTTCAGACCTTTTGTTAATTTGTTGATAAGAGGAGACACAGAAACATATCTAAGTGGGAAACGACCTTGGGAAACAGCAAAGCAGAGGAATTAGTCT - >AT5G06980.4
AAGAGAGTGAGAGCCTGAGAGGAACATTATCCACTGCATCCCCATGAGACCATGGGTCCCACTCCACCGCAAAACAGTCTGTCACGTGTCATCACCTCCCTATACCTACAGGACACGTGTCTACACCAAATCGAGTGAACATGTGACGTGTCGTCACCAAACCTGAGCCGCTAACCACTGCCTGATCTGGAGGGTATATCCGTAACTTAAAATCCTTTTGTCGTCTACCCGTAAACAGACAACTTTTAAGAACTACAAAAACGTACAAGTTGGCCAGTTGTGTCTTGCAAGATTTAATTAATTTTAATTCAAGTGCCGACCTCACACAGAAAAAGATATGTTTAACACGTGGACCAATGAAAGAGTTGCTTTAGATGGAGGAGTAATCTAAGCCACAAATCTCGTTTGTGAATTCTAAGCCACTAACTAAAGTTCAAACTCACGCGCTCTCCACTTCCTCTCTTCAACTTGCTTCTTTGTCTTCTCTCTCTTTCCTCCTTCGCACTCACAAATCTACAGAAGATAGAAGAAGATAGACTCATAATCTTTTGGATTTGGATTTAGATCTGATCATAAAGGTTAAAGTATCATTCATGGATCGTTATTCGAGGAGGAATTTAGAGGATCTTGTTGTGCCTAACTATCAAGAGACATCAGATTCGTACCCTTCTCCTGATATGTGGGGTACTGGATGGAGCATGAACTCTTCAGAAGCTGCTGAGAAATGTTTTGATTATGATGTGATTCACAATGGTTTCAGTGGAGGATTATACAGTCAGATGGAGATGGATATGGGAACTAGTGAACAAGTAGAAGAAGAAACTAAGAAGTTAAAGGCTAGTGGTTGTTTTGACCGTTCGCTTCATGATTTTGATGAAATCCAACACATGGATGACATGTTCTTAAGTTCCATTTTGGAGGATGTTCCAGGGAATGAGAATTTTCTTTCTTTCAAGGAGTCGGATAATAACAACAGCTCCAGTTCCTCCTATCTCGACACAACTGATGGCAGGGAAGTCCCTTTGTTCCATTACAACTGGGAAACTTGTCAAGATATGCCACTTATGGAGGAGGATGCACCTATGAATCTGTGTGAGGAGAACAAGGAGGAGGCATCTGCTGAAGAAGTTGTGTTGCAGGATCTACAAAGGGCTACAGAAATGTTGACTGATGATACCCGCAAGTGCTTCCGCGATACCTTTTACCGGCTTGCAAAGAACTCACAACAGAAGTCAGACTCCAACTCGGATGAGTTCCTTGAGGATAGAACCAGTAGGGAAACTGAATTTGAAACCAAACTCAATCGACAGAGCCGTGGCCAATCTCACATTCAACAAGATGGAATCCAACATGAGAAATATGCCTCCACCGAAGAGACTTTCTTCTGTTCAAGGATAAGAGAGTTTCATCATATTTGGTAATACCATATGTGTATATAATATATATGTGTGTGTGTATGTGTGCTTGGCTTGACTTTTTCCAAGCTTCAGTTTTGATCTGTTTCATTAGACTCTGACTCTGCTTCTGGATTTCCAATTTCTTATGCTATATGTTATTTACCGAGTGAACCTGTGAATGTACATTACCCCATGTAGAATCTGTTGTTTCAATGTATCAAAAAAGATATTCTTCAGACCTTTTGTTAATTTGTTGATAAGAGGAGACACAGAAACATATCTAAGTGGGAAACGACCTTGGGAAACAGCAAAGCAGAGGAATTAGTCT - >AT5G06980.5
AAGAGAGTGAGAGCCTGAGAGGAACATTATCCACTGCATCCCCATGAGACCATGGGTCCCACTCCACCGCAAAACAGTCTGTCACGTGTCATCACCTCCCTATACCTACAGGACACGTGTCTACACCAAATCGAGTGAACATGTGACGTGTCGTCACCAAACCTGAGCCGCTAACCACTGCCTGATCTGGAGGGTATATCCGTAACTTAAAATCCTTTTGTCGTCTACCCGTAAACAGACAACTTTTAAGAACTACAAAAACGTACAAGTTGGCCAGTTGTGTCTTGCAAGATTTAATTAATTTTAATTCAAGTGCCGACCTCACACAGAAAAAGATATGTTTAACACGTGGACCAATGAAAGAGTTGCTTTAGATGGAGGAGTAATCTAAGCCACAAATCTCGTTTGTGAATTCTAAGCCACTAACTAAAGTTCAAACTCACGCGCTCTCCACTTCCTCTCTTCAACTTGCTTCTTTGTCTTCTCTCTCTTTCCTCCTTCGCACTCACAAATCTACAGAAGATAGAAGAAGATAGACTCATAATCTTTTGGATTTGGATTTAGATCTGATCATAAAGGTTAAAGTATCATTCATGGATCGTTATTCGAGGAGGAATTTAGAGGATCTTGTTGTGCCTAACTATCAAGAGACATCAGATTCGTACCCTTCTCCTGATATGTGGGGTACTGGATGGAGCATGAACTCTTCAGAAGCTGCTGAGAAATGTTTTGATTATGATGTGATTCACAATGGTTTCAGTGGAGGATTATACAGTCAGATGGAGATGGATATGGGAACTAGTGAACAAGTAGAAGAAGAAACTAAGAAGTTAAAGGCTAGTGGTTGTTTTGACCGTTCGCTTCATGATTTTGATGAAATCCAACACATGGATGACATGTTCTTAAGTTCCATTTTGGAGGATGTTCCAGGGAATGAGAATTTTCTTTCTTTCAAGGAGTCGGATAATAACAACAGCTCCAGTTCCTCCTATCTCGACACAACTGATGGCAGGGAAGTCCCTTTGTTCCATTACAACTGGGAAACTTGTCAAGATATGCCACTTATGGAGGAGGATGCACCTATGAATCTGTGTGAGGAGAACAAGGAGGAGGCATCTGCTGAAGAAGTTGTGTTGCAGGATCTACAAAGGGCTACAGAAATGTTGACTGATGATACCCGCAAGTGCTTCCGCGATACCTTTTACCGGCTTGCAAAGAACTCACAACAGAAGTCAGACTCCAACTCGGATGAGTTCCTTGAGGATAGAACCAGTAGGGAAACTGAATTTGAAACCAAACTCAATCGACAGAGCCGTGGCCAATCTCACATTCAACAAGATGGAATCCAACATGAGAAATATGCCTCCACCGAAGAGACTTTCTTCTGTTCAAGGATAAGAGAGTTTCATCATATTTGGTAATACCATATGTGTATATAATATATATGTGTGTGTGTATGTGTGCTTGGCTTGACTTTTTCCAAGCTTCAGTTTTGATCTGTTTCATTAGACTCTGACTCTGCTTCTGGATTTCCAATTTCTTATGCTATATGTTATTTACCGAGTGAACCTGTGAATGTACATTACCCCATGTAGAATCTGTTGTTTCAATGTATCAAAAAAGATATTCTTCAGACCTTTTGTTAATTTGTTGATAAGAGGAGACACAGAAACATATCTAAGTGGGAAACGACCTTGGGAAACAGCAAAGCAGAGGAATTAGTCT - >AT5G06980.2
AAGAGAGTGAGAGCCTGAGAGGAACATTATCCACTGCATCCCCATGAGACCATGGGTCCCACTCCACCGCAAAACAGTCTGTCACGTGTCATCACCTCCCTATACCTACAGGACACGTGTCTACACCAAATCGAGTGAACATGTGACGTGTCGTCACCAAACCTGAGCCGCTAACCACTGCCTGATCTGGAGGGTATATCCGTAACTTAAAATCCTTTTGTCGTCTACCCGTAAACAGACAACTTTTAAGAACTACAAAAACGTACAAGTTGGCCAGTTGTGTCTTGCAAGATTTAATTAATTTTAATTCAAGTGCCGACCTCACACAGAAAAAGATATGTTTAACACGTGGACCAATGAAAGAGTTGCTTTAGATGGAGGAGTAATCTAAGCCACAAATCTCGTTTGTGAATTCTAAGCCACTAACTAAAGTTCAAACTCACGCGCTCTCCACTTCCTCTCTTCAACTTGCTTCTTTGTCTTCTCTCTCTTTCCTCCTTCGCACTCACAAATCTACAGAAGATAGAAGAAGATAGACTCATAATCTTTTGGATTTGGATTTAGATCTGATCATAAAGGTTAAAGTATCATTCATGGATCGTTATTCGAGGAGGAATTTAGAGGATCTTGTTGTGCCTAACTATCAAGAGACATCAGATTCGTACCCTTCTCCTGATATGTGGGGTACTGGATGGAGCATGAACTCTTCAGAAGCTGCTGAGAAATGTTTTGATTATGATGTGATTCACAATGGTTTCAGTGGAGGATTATACAGTCAGATGGAGATGGATATGGGAACTAGTGAACAAGTAGAAGAAGAAACTAAGAAGTTAAAGGCTAGTGGTTGTTTTGACCGTTCGCTTCATGATTTTGATGAAATCCAACACATGGATGACATGTTCTTAAGTTCCATTTTGGAGGATGTTCCAGGGAATGAGAATTTTCTTTCTTTCAAGGAGTCGGATAATAACAACAGCTCCAGTTCCTCCTATCTCGACACAACTGATGGCAGGGAAGTCCCTTTGTTCCATTACAACTGGGAAACTTGTCAAGATATGCCACTTATGGAGGAGGATGCACCTATGAATCTGTGTGAGGAGAACAAGGAGGAGGCATCTGCTGAAGAAGTTGTGTTGCAGGATCTACAAAGGGCTACAGAAATGTTGACTGATGATACCCGCAAGTGCTTCCGCGATACCTTTTACCGGCTTGCAAAGAACTCACAACAGAAGTCAGACTCCAACTCGGATGAGTTCCTTGAGGATAGAACCAGTAGGGAAACTGAATTTGAAACCAAACTCAATCGACAGAGCCGTGGCCAATCTCACATTCAACAAGATGGAATCCAACATGAGAAATATGCCTCCACCGAAGAGACTTTCTTCTGTTCAAGGATAAGAGAGTTTCATCATATTTGGTAATACCATATGTGTATATAATATATATGTGTGTGTGTATGTGTGCTTGGCTTGACTTTTTCCAAGCTTCAGTTTTGATCTGTTTCATTAGACTCTGACTCTGCTTCTGGATTTCCAATTTCTTATGCTATATGTTATTTACCGAGTGAACCTGTGAATGTACATTACCCCATGTAGAATCTGTTGTTTCAATGTATCAAAAAAGATATTCTTCAGACCTTTTGTTAATTTGTTGATAAGAGGAGACACAGAAACATATCTAAGTGGGAAACGACCTTGGGAAACAGCAAAGCAGAGGAATTAGTCT
CDS Sequence
Protein Sequence