Information report for AT5G06960
Gene Details
|
|
Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Functional Keywords
Literature and News
- NPR1 differentially interacts with members of the TGA/OBF family of transcription factors that bind an element of the PR-1 gene required for induction by salicylic acid. DOI: 10.1094/MPMI.2000.13.2.191 ; PMID: 10659709
- Interactions between distinct types of DNA binding proteins enhance binding to ocs element promoter sequences. DOI: 10.1105/tpc.7.12.2241 ; PMID: 8718629
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- bZIP transcription factors in Arabidopsis. DOI: 10.1016/s1360-1385(01)02223-3 ; PMID: 11906833
- Over-expression of TGA5, which encodes a bZIP transcription factor that interacts with NIM1/NPR1, confers SAR-independent resistance in Arabidopsis thaliana to Peronospora parasitica. DOI: 10.1046/j.1365-313x.2001.01411.x ; PMID: 12383081
- Knockout analysis of Arabidopsis transcription factors TGA2, TGA5, and TGA6 reveals their redundant and essential roles in systemic acquired resistance. DOI: 10.1105/tpc.014894 ; PMID: 14576289
- Salicylic acid-inducible Arabidopsis CK2-like activity phosphorylates TGA2. DOI: 10.1007/s11103-005-0409-1 ; PMID: 15821979
- Negative regulation of defense responses in Arabidopsis by two NPR1 paralogs. DOI: 10.1111/j.1365-313X.2006.02903.x ; PMID: 17076807
- SA-inducible Arabidopsis glutaredoxin interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription. DOI: 10.1111/j.1365-313X.2007.03039.x ; PMID: 17397508
- General detoxification and stress responses are mediated by oxidized lipids through TGA transcription factors in Arabidopsis. DOI: 10.1105/tpc.107.054809 ; PMID: 18334669
- Global analysis of Arabidopsis gene expression uncovers a complex array of changes impacting pathogen response and cell cycle during geminivirus infection. DOI: 10.1104/pp.108.121038 ; PMID: 18650403
- The Arabidopsis GRAS protein SCL14 interacts with class II TGA transcription factors and is essential for the activation of stress-inducible promoters. DOI: 10.1105/tpc.108.058974 ; PMID: 18984675
- Arabidopsis thaliana class-II TGA transcription factors are essential activators of jasmonic acid/ethylene-induced defense responses. DOI: 10.1111/j.1365-313X.2009.04044.x ; PMID: 19832945
- The transcriptome of cis-jasmone-induced resistance in Arabidopsis thaliana and its role in indirect defence. DOI: 10.1007/s00425-010-1244-4 ; PMID: 20711606
- Repression of the Arabidopsis thaliana jasmonic acid/ethylene-induced defense pathway by TGA-interacting glutaredoxins depends on their C-terminal ALWL motif. DOI: 10.1093/mp/ssr113 ; PMID: 22207719
- Systematic identification of functional plant modules through the integration of complementary data sources. DOI: 10.1104/pp.112.196725 ; PMID: 22589469
- TGA transcription factors and jasmonate-independent COI1 signalling regulate specific plant responses to reactive oxylipins. DOI: 10.1093/jxb/ers389 ; PMID: 23349138
- Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. DOI: 10.1186/1471-2229-13-229 ; PMID: 24377444
- Promoter-based integration in plant defense regulation. DOI: 10.1104/pp.114.248716 ; PMID: 25352272
- An Arabidopsis gene regulatory network for secondary cell wall synthesis. DOI: 10.1038/nature14099 ; PMID: 25533953
- Ectopically expressed glutaredoxin ROXY19 negatively regulates the detoxification pathway in Arabidopsis thaliana. DOI: 10.1186/s12870-016-0886-1 ; PMID: 27624344
- TGA Transcription Factors Activate the Salicylic Acid-Suppressible Branch of the Ethylene-Induced Defense Program by Regulating ORA59 Expression. DOI: 10.1104/pp.114.243360 ; PMID: 24989234
- Establishment of Expression in the SHORTROOT-SCARECROW Transcriptional Cascade through Opposing Activities of Both Activators and Repressors. DOI: 10.1016/j.devcel.2016.09.031 ; PMID: 27923776
- Arabidopsis WRKY50 and TGA Transcription Factors Synergistically Activate Expression of PR1. DOI: 10.3389/fpls.2018.00930 ; PMID: 30057584
- NPR1 Promotes Its Own and Target Gene Expression in Plant Defense by Recruiting CDK8. DOI: 10.1104/pp.19.00124 ; PMID: 31110139
- Transcriptional regulation of nitrogen-associated metabolism and growth. DOI: 10.1038/s41586-018-0656-3 ; PMID: 30356219
- A PXY-Mediated Transcriptional Network Integrates Signaling Mechanisms to Control Vascular Development in Arabidopsis. DOI: 10.1105/tpc.19.00562 ; PMID: 31806676
- A dual role for glutathione transferase U7 in plant growth and protection from methyl viologen-induced oxidative stress. DOI: 10.1093/plphys/kiab444 ; PMID: 34599589
- A Ralstonia solanacearum effector targets TGA transcription factors to subvert salicylic acid signaling. DOI: 10.1093/plcell/koac015 ; PMID: 35043960
- Enolase2 regulates seed fatty acid accumulation via mediating carbon partitioning in Arabidopsis thaliana. DOI: 10.1111/ppl.13797 ; PMID: 36251672
- N-hydroxypipecolic acid induces systemic acquired resistance and transcriptional reprogramming via TGA transcription factors. DOI: 10.1111/pce.14572 ; PMID: 36790086
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- bZIP transcription factors in Arabidopsis. DOI: 10.1016/s1360-1385(01)02223-3 ; PMID: 11906833
- Negative regulation of defense responses in Arabidopsis by two NPR1 paralogs. DOI: 10.1111/j.1365-313X.2006.02903.x ; PMID: 17076807
Gene Resources
- UniProt: A0A178UIF0
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UIF0
- EnsemblPlants: AT5G06960.1, AT5G06960.2
- Gramene: AT5G06960.1, AT5G06960.2
- KEGG: ath:AT5G06960
- ExpressionAtlas: AT5G06960
- InterPro: IPR004827, IPR025422, IPR046347
- PANTHER: PTHR45693, PTHR45693:SF39
- SUPFAM: SSF57959
- PROSITE: PS00036, PS50217, PS51806
- Gene3D: 1.20.5.170
- OrthoDB: A0A178UIF0
- SWISS-MODEL: A0A178UIF0
Sequences
cDNA Sequence
- >AT5G06960.1
CTTTTTAACCCTCAGCATCTAGAGGTCCACCATCACTTGAGTTTCGTCTTCCATTCCTGTTTTTTTTCAGAGACCGGCAAAATAAAAAAAAAGAAGATCGTACAACTAAAAATACCTCAAAGAAGGAAGATACAAAAGTAGTAACCTTTGTTGGTGATTGATACTATATCTGTTGTGGGTTTTAGACAAAGACCACGTCTTTGCAGTTGTAGATTGGAATTTTCCGGATCTTTCTCTAAATCGCTTTTTCTCCGAGCAACTTTTGTTTGGGGTTAAGCTCAAAGAATCCGTTCTTTTCAGTCTTTACTCCATCTAGGGTACCACGATTGGATCGGTTTTTATCTGATGATTTAGTAACAGAGATTTTGAAGAAAAAGAAAAATGGGAGATACTAGTCCAAGAACATCAGTCTCAACAGATGGAGACACTGATCATAATAACCTAATGTTCGATGAAGGGCATTTGGGTATCGGTGCTTCTGATTCTAGTGACCGTTCAAAGAGTAAAATGGATCAAAAGACGCTTCGTAGGCTCGCTCAAAACCGTGAGGCTGCAAGGAAAAGCAGATTGAGGAAGAAAGCATATGTTCAGCAGCTAGAGAACAGTCGATTGAAGCTAACACAACTTGAGCAGGAGCTACAAAGAGCACGGCAACAGGGTGTCTTTATCTCAAGCTCTGGAGACCAAGCCCATTCTACCGCTGGAGATGGGGCAATGGCATTTGATGTAGAATACAGACGATGGCAGGAAGATAAAAACAGACAGATGAAGGAGCTGAGTTCTGCTATAGATTCTCACGCGACTGATTCTGAGCTTCGGATAATTGTAGATGGAGTAATAGCTCACTATGAGGAGCTTTACAGGATAAAAGGCAACGCAGCTAAGAGTGATGTCTTCCATTTATTATCAGGGATGTGGAAAACCCCAGCTGAGAGATGTTTCTTGTGGCTCGGCGGTTTCCGTTCATCAGAACTTCTCAAGCTTATAGCGAGTCAGTTGGAGCCCTTGACAGAACAACAATCGCTAGACATAAATAACTTGCAACAGTCTTCTCAGCAAGCAGAAGATGCTTTGTCTCAAGGGATGGACAACTTACAGCAATCACTCGCTGATACTTTATCGAGTGGGACTCTCGGTTCAAGTTCATCAGGGAATGTAGCTAGCTACATGGGTCAGATGGCCATGGCGATGGGGAAGTTAGGTACCCTTGAAGGATTTATCCGCCAGGCTGATAACTTAAGGCTACAAACATATCAACAGATGGTGAGACTATTAACAACCCGACAATCGGCTCGTGCTCTCCTTGCAGTACACAATTATACATTGCGGTTACGTGCTCTTAGCTCTCTATGGCTTGCCAGACCAAGAGAGTGAACCATGACTCTATTATACTTCAACGAAGGTCCAGAAAATTTGAGATTCTTAGCATAAGATTTGACGACTTTAGACACGTAGCTCGTATACAAGATTATGATTATACTGTTTTGTGTTGTAATGTTTGTGTGTAATGAATGTATCTTGAAATCATAAAAGTCCCGTAACATTTGAAAAGCATTAGGATACTAAAGAGAAGCAGTGACTTTGGTTTTGTACAATATCATTACAAATTATAAACACAGTCATTCAGTTTCTAAGCGAATGTAAATGAGACATAACAAAGAAACAATAGTGGATGAGTTGAAAGGAGTTGTCG - >AT5G06960.3
CTTTTTAACCCTCAGCATCTAGAGGTCCACCATCACTTGAGTTTCGTCTTCCATTCCTGTTTTTTTTCAGAGACCGGCAAAATAAAAAAAAAGAAGATCGTACAACTAAAAATACCTCAAAGAAGGAAGATACAAAAGTAGTAACCTTTGTTGGTGATTGATACTATATCTGTTGTGGGTTTTAGACAAAGACCACGTCTTTGCAGTTGTAGATTGGAATTTTCCGGATCTTTCTCTAAATCGCTTTTTCTCCGAGCAACTTTTGTTTGGGGTTAAGCTCAAAGAATCCGTTCTTTTCAGTCTTTACTCCATCTAGGGTACCACGATTGGATCGGTTTTTATCTGATGATTTAGTAACAGAGATTTTGAAGAAAAAGAAAAATGGGAGATACTAGTCCAAGAACATCAGTCTCAACAGATGGAGACACTGATCATAATAACCTAATGTTCGATGAAGGGCATTTGGGTATCGGTGCTTCTGATTCTAGTGACCGTTCAAAGAGTAAAATGGATCAAAAGACGCTTCGTAGGCTCGCTCAAAACCGTGAGGCTGCAAGGAAAAGCAGATTGAGGAAGAAAGCATATGTTCAGCAGCTAGAGAACAGTCGATTGAAGCTAACACAACTTGAGCAGGAGCTACAAAGAGCACGGCAACAGGGTGTCTTTATCTCAAGCTCTGGAGACCAAGCCCATTCTACCGCTGGAGATGGGGCAATGGCATTTGATGTAGAATACAGACGATGGCAGGAAGATAAAAACAGACAGATGAAGGAGCTGAGTTCTGCTATAGATTCTCACGCGACTGATTCTGAGCTTCGGATAATTGTAGATGGAGTAATAGCTCACTATGAGGAGCTTTACAGGATAAAAGGCAACGCAGCTAAGAGTGATGTCTTCCATTTATTATCAGGGATGTGGAAAACCCCAGCTGAGAGATGTTTCTTGTGGCTCGGCGGTTTCCGTTCATCAGAACTTCTCAAGCTTATAGCGAGTCAGTTGGAGCCCTTGACAGAACAACAATCGCTAGACATAAATAACTTGCAACAGTCTTCTCAGCAAGCAGAAGATGCTTTGTCTCAAGGGATGGACAACTTACAGCAATCACTCGCTGATACTTTATCGAGTGGGACTCTCGGTTCAAGTTCATCAGGGAATGTAGCTAGCTACATGGGTCAGATGGCCATGGCGATGGGGAAGTTAGGTACCCTTGAAGGATTTATCCGCCAGGCTGATAACTTAAGGCTACAAACATATCAACAGATGGTGAGACTATTAACAACCCGACAATCGGCTCGTGCTCTCCTTGCAGTACACAATTATACATTGCGGTTACGTGCTCTTAGCTCTCTATGGCTTGCCAGACCAAGAGAGTGAACCATGACTCTATTATACTTCAACGAAGGTCCAGAAAATTTGAGATTCTTAGCATAAGATTTGACGACTTTAGACACGTAGCTCGTATACAAGATTATGATTATACTGTTTTGTGTTGTAATGTTTGTGTGTAATGAATGTATCTTGAAATCATAAAAGTCCCGTAACATTTGAAAAGCATTAGGATACTAAAGAGAAGCAGTGACTTTGGTTTTGTACAATATCATTACAAATTATAAACACAGTCATTCAGTTTCTAAGCGAATGTAAATGAGACATAACAAAGAAACAATAGTGGATGAGTTGAAAGGAGTTGTCG - >AT5G06960.2
CTTTTTAACCCTCAGCATCTAGAGGTCCACCATCACTTGAGTTTCGTCTTCCATTCCTGTTTTTTTTCAGAGACCGGCAAAATAAAAAAAAAGAAGATCGTACAACTAAAAATACCTCAAAGAAGGAAGATACAAAAGTAGTAACCTTTGTTGGTGATTGATACTATATCTGTTGTGGGTTTTAGACAAAGACCACGTCTTTGCAGTTGTAGATTGGAATTTTCCGGATCTTTCTCTAAATCGCTTTTTCTCCGAGCAACTTTTGTTTGGGGTTAAGCTCAAAGAATCCGTTCTTTTCAGTCTTTACTCCATCTAGGGTACCACGATTGGATCGGTTTTTATCTGATGATTTAGTAACAGAGATTTTGAAGAAAAAGAAAAATGGGAGATACTAGTCCAAGAACATCAGTCTCAACAGATGGAGACACTGATCATAATAACCTAATGTTCGATGAAGGGCATTTGGGTATCGGTGCTTCTGATTCTAGTGACCGTTCAAAGAGTAAAATGGATCAAAAGACGCTTCGTAGGCTCGCTCAAAACCGTGAGGCTGCAAGGAAAAGCAGATTGAGGAAGAAAGCATATGTTCAGCAGCTAGAGAACAGTCGATTGAAGCTAACACAACTTGAGCAGGAGCTACAAAGAGCACGGCAACAGGGTGTCTTTATCTCAAGCTCTGGAGACCAAGCCCATTCTACCGCTGGAGATGGGGCAATGGCATTTGATGTAGAATACAGACGATGGCAGGAAGATAAAAACAGACAGATGAAGGAGCTGAGTTCTGCTATAGATTCTCACGCGACTGATTCTGAGCTTCGGATAATTGTAGATGGAGTAATAGCTCACTATGAGGAGCTTTACAGGATAAAAGGCAACGCAGCTAAGAGTGATGTCTTCCATTTATTATCAGGGATGTGGAAAACCCCAGCTGAGAGATGTTTCTTGTGGCTCGGCGGTTTCCGTTCATCAGAACTTCTCAAGCTTATAGCGAGTCAGTTGGAGCCCTTGACAGAACAACAATCGCTAGACATAAATAACTTGCAACAGTCTTCTCAGCAAGCAGAAGATGCTTTGTCTCAAGGGATGGACAACTTACAGCAATCACTCGCTGATACTTTATCGAGTGGGACTCTCGGTTCAAGTTCATCAGGGAATGTAGCTAGCTACATGGGTCAGATGGCCATGGCGATGGGGAAGTTAGGTACCCTTGAAGGATTTATCCGCCAGGCTGATAACTTAAGGCTACAAACATATCAACAGATGGTGAGACTATTAACAACCCGACAATCGGCTCGTGCTCTCCTTGCAGTACACAATTATACATTGCGGTTACGTGCTCTTAGCTCTCTATGGCTTGCCAGACCAAGAGAGTGAACCATGACTCTATTATACTTCAACGAAGGTCCAGAAAATTTGAGATTCTTAGCATAAGATTTGACGACTTTAGACACGTAGCTCGTATACAAGATTATGATTATACTGTTTTGTGTTGTAATGTTTGTGTGTAATGAATGTATCTTGAAATCATAAAAGTCCCGTAACATTTGAAAAGCATTAGGATACTAAAGAGAAGCAGTGACTTTGGTTTTGTACAATATCATTACAAATTATAAACACAGTCATTCAGTTTCTAAGCGAATGTAAATGAGACATAACAAAGAAACAATAGTGGATGAGTTGAAAGGAGTTGTCG
CDS Sequence
Protein Sequence