Information report for AT5G06850
Gene Details
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Functional Descriptions
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
- PO:0000071 — companion cell — célula acompañiante (Spanish, exact), minor vein companion cell (exact), 伴細胞 (Japanese, exact)
- PO:0005417 — phloem — floema (Spanish, exact), portion of phloem tissue (exact), 師部、師管 (Japanese, exact)
Functional Keywords
- root , companion cell , phloem
Literature and News
- Use of the transposable element Ac/Ds in conjunction with Spm/dSpm for gene tagging allows extensive genome coverage with a limited number of starter lines: functional analysis of a four-element system in Arabidopsis thaliana. DOI: 10.1007/s00438-006-0158-0 ; PMID: 17004082
- Comparison between a coffee single copy chromosomal region and Arabidopsis duplicated counterparts evidenced high level synteny between the coffee genome and the ancestral Arabidopsis genome. DOI: 10.1007/s11103-007-9191-6 ; PMID: 17551672
- Functional compensation of primary and secondary metabolites by duplicate genes in Arabidopsis thaliana. DOI: 10.1093/molbev/msq204 ; PMID: 20736450
- FTIP1 is an essential regulator required for florigen transport. DOI: 10.1371/journal.pbio.1001313 ; PMID: 22529749
- FE, a phloem-specific Myb-related protein, promotes flowering through transcriptional activation of FLOWERING LOCUS T and FLOWERING LOCUS T INTERACTING PROTEIN 1. DOI: 10.1111/tpj.12951 ; PMID: 26239308
- Characterization of Multiple C2 Domain and Transmembrane Region Proteins in Arabidopsis. DOI: 10.1104/pp.17.01144 ; PMID: 29259105
- Re-Evaluation of Florigen Transport Kinetics with Separation of Functions by Mutations That Uncouple Flowering Initiation and Long-Distance Transport. DOI: 10.1093/pcp/pcy063 ; PMID: 29562349
Gene Resources
- UniProt: A0A178UK77
- EMBL: CACRSJ010000110, CACSHJ010000096, LR881470
- AlphaFoldDB: A0A178UK77
- EnsemblPlants: AT5G06850.1
- Gramene: AT5G06850.1
- KEGG: ath:AT5G06850
- Orthologous matrix: KTTNPMW
- ExpressionAtlas: AT5G06850
- InterPro: IPR000008, IPR013583, IPR035892
- PANTHER: PTHR31425, PTHR31425:SF37
- SUPFAM: SSF49562
- PROSITE: PS50004
- Gene3D: 2.60.40.150
- OrthoDB: A0A178UK77
- SWISS-MODEL: A0A178UK77
- Conserved Domain Database: cd04019, cd08378, cd08379
Sequences
cDNA Sequence
- >AT5G06850.1
ACTGCTGAAAAATTTCTTAATGTACCTAAAAGTCTTAAGACAAACGAAGAATCTGCTTTCCTATTTAATAAAACGAAGATAACAAAAAAAAAGAATCAGCTTCCCTCTTAAAGAAGGAGAAAAACAGAGAGAATAAGAAGTAATTTTTTAGGGTTCTTCCTTTTTCATTTTGATTCTTCTTTTTCTTTGAGATAGAATTGTTTCTCTTTCGTTCTCTCTCTGTGTATCAAACAAAAATTTGATTATGGAATAACTCTTAACTTCTTGGTTTCTTAAATTCTTCTTTCTTTCTTTTTTTCATTTCTATGGTACAGCAGCAAACAGAGAATTTTATGGCAGCTTCTTCAACATCTTTCTCAAGATAATTCAAGACATTCTGTGTTTTCCTGCAAACACTTGAATGAGTTCATGGAACAGAACCAAGAGACAAAGCTTATATTTGCGTCGACCACTTAGTATATATTGTTTAAATCAGGAACAGAATTGAAACGTTTTGAAAGAAACAGGAGAATCTTTTGGTTCAAGTAATCTAAAACCATGGCAGCCAAAGATGGAGCTAAGAGCCAAGAAGACTATAAGCTTAAAGACATGAAACCAGAGCTTGGAGAGAGATGGCCACATGGAGGACAGCGTGGAGGAACCGGATGGATTGGCAGTGAACGAGCTGCAAGCACATATGACCTTGTTGAGCAAATGTTTTATCTCTATGTTCGGGTCGTCAAAGCCAAGGATCTTCCTCCAAACCCTGTCACCAGCAACTGTGATCCTTATGTGGAAGTGAAAATAGGAAACTACAAAGGAAAGACTAAACACTTCGAGAAAAGAACCAACCCGGAGTGGAATCAAGTTTTCGCATTTTCAAAAGACAAGGTCCAATCCTCTACTGTTGAAGTCTTTGTGCGCGATAAGGAGATGGTTACAAGAGATGAATACATCGGGAAGGTTGTGTTTGATATGCGTGAGGTTCCTACAAGAGTTCCTCCTGATAGTCCACTTGCACCTCAGTGGTACAGATTAGAAGATCGGCGAGGTGAGAGTAAGAAAAGAGGAGAGGTTATGGTAGCGGTTTGGCTTGGGACGCAAGCCGATGAAGCATTTCCTGATGCTTGGCATTCGGATGCTTCCTCTGTTCAAGGAGAAGGTGTCCAAAGCGTGAGGTCTAAAGTCTATGTATCTCCCAAATTGTGGTATCTGCGGGTTAATGTCATCGAGGCGCAAGATGTTGAGCCTAGTGACAGGAGCCAACCACCTCAAGCTTTCGTTAAAGTACAAGTTGGGAATCAGATTCTGAAAACAAAGTTATGTCCTAACAAGACGACGAATCCGATGTGGAACGAAGATCTTGTTTTTGTAGCTGCAGAGCCATTTGAAGAACAGTTCTTCTTGACGGTCGAAAACAAGGTGACACCAGCTAAAGATGAAGTCATGGGGAGGCTGATCTCACCTTTGAGCGTATTTGAGAAAAGGTTAGATCACAGAGCTGTTCATTCCAAATGGTACAACCTCGAAAAGTTTGGGTTTGGGGCTCTGGAAGGAGACAAGAGACACGAGCTCAAGTTCTCCAGCCGAATCCACCTACGAGTTTGCCTTGAAGGAGGTTACCATGTAATGGACGAGTCAACTCTGTACATCAGTGACGTGAAACCTACGGCAAGGCAACTATGGAAGTCTCCTATTGGCATCCTTGAAGTAGGAATCTTGAGTGCTCAAGGGCTATCGCCTATGAAAACAAAAGACGGTAAAGCGACAACAGATCCGTATTGTGTTGCCAAGTACGGTCAAAAATGGGTGAGAACAAGAACCATCATTGACAGCTCTAGCCCTAAATGGAATGAGCAATACACATGGGAAGTGTATGATCCTTGTACAGTTATCACACTGGGAGTTTTCGATAACTGTCACCTTGGCGGAAGTGAGAAATCGAACAGTGGAGCCAAAGTGGATTCGAGAATCGGGAAGGTAAGGATCCGGTTGTCGACTCTAGAGGCTGATAGAATCTACACTCACTCCTACCCTCTTCTTGTTCTGCAAACAAAAGGGTTAAAGAAAATGGGAGAAGTCCAATTAGCTGTGAGATTCACTTGTCTATCCTTGGCTCACATGATCTATCTTTATGGCCATCCTCTGCTTCCAAAGATGCATTATCTCCATCCATTCACTGTGAACCAATTAGACAGTCTAAGATACCAAGCAATGAGCATTGTCGCAGCACGGTTATCTCGAGCAGAGCCTCCTTTAAGGAAAGAGAACGTAGAGTACATGCTTGATGTTGATTCACACATGTGGAGCATGAGAAGGAGCAAAGCTAACTTCTTCAGGATAGTGTCTGTGTTTGCAGGCTTGATTGCTATGAGTAAATGGCTCGGAGACGTCTGCTACTGGAAGAATCCGTTGACGACGATATTATTCCACGTTCTCTTCTTTATATTGATTTGTTATCCGGAGCTGATACTCCCAACCACATTCCTCTACATGTTCTTGATAGGGCTTTGGAATTTCCGGTTCAGGCCGCGTCATCCTGCTCATATGGACACAAAGGTATCTTGGGCTGAAGCGGCTAGCCCTGATGAGCTAGATGAGGAATTTGATACTTTCCCAACTTCAAAGGGACAAGATGTTGTGAAGATGAGGTATGATAGGTTAAGAAGCGTTGCGGGTCGGATCCAGATGGTTGTTGGAGACATTGCAACGCAAGGAGAGAGGTTTCAGGCTTTGTTGAGTTGGAGAGATCCGCGTGCGACTTGCTTGTTTGTGATTTTTTGTCTTGTTGCTGCGATGATTTTGTACGTGACGCCTTTCAAGATCATAGCTCTTGCGGGTGGGATGTTCTGGATGAGGCATCCTAAGTTCAGAAGCAAGATGCCTTCTGCTCCAAGTAACTTCTTCAGGAAATTACCTTCAAAAGCAGATTGTATGCTTTGAATTGTAAAACTTCTTTGTGGCTTTTAGGTCTTCTCTGCTCGTAACTTGTGTTTCTTGTGTTCGTGTGTTTATCTGCTCTGTTTTATTATTTTGTTCTGTTTGCTTCTATTCTTATCATGTACTGTGTTGTTGGGTTTACTCTAAAACCCAAAAGTAGTGGGCTTTAGTTATAATGTTTTGTTTGTACGTTTTTTCCTTCTCTTAAAAAGAAATAAAATTCAATAGAAAACTTTAGGGCCCAAAAATTTACGGCCCA
CDS Sequence
Protein Sequence