Gene Details:
- Gene ID: AT5G06770
- Gene Symbol: AtC3H52, AtKH23, KHZ2
- Gene Name:
- Description: KH domain-containing protein / zinc finger (CCCH type) family protein;(source:Araport11)
- TAIR Accession:
- Genome: Araport11_genome_release
- Species: Arabidopsis thaliana
Transcripts:
Plant Ontology Annotations:
- PO:0009005 — root — raíz (Spanish, exact), radices (exact, plural), radix (exact), 根 (Japanese, exact), aerial root (narrow), climbing root (narrow)
Function-related keywords:
Literature:
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
- Genome analysis: RNA recognition motif (RRM) and K homology (KH) domain RNA-binding proteins from the flowering plant Arabidopsis thaliana. DOI: 10.1093/nar/30.3.623 ; PMID: 11809873
- Regulation of flowering time in Arabidopsis by K homology domain proteins. DOI: 10.1073/pnas.0404552101 ; PMID: 15310842
- Genome-wide analysis of CCCH zinc finger family in Arabidopsis and rice. DOI: 10.1186/1471-2164-9-44 ; PMID: 18221561
- KHZ1 and KHZ2, novel members of the autonomous pathway, repress the splicing efficiency of FLC pre-mRNA in Arabidopsis. DOI: 10.1093/jxb/erz499 ; PMID: 31701139
- Genome-Wide Characterization and Expression Analysis of KH Family Genes Response to ABA and SA in Arabidopsis thaliana. DOI: 10.3390/ijms23010511 ; PMID: 35008936
- Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. DOI: 10.1126/science.290.5499.2105 ; PMID: 11118137
Sequences:
cDNA Sequence
- >AT5G06770.4
TTCCACGAATTAATTTATATTATTAACAAATTAAGCAAACCTCTATCCCCCATTTATATTGTTGAGCTGTGTGTGTGGAGATGATGATGATGATGATAAACCCAATAGAATTTTAAAAGGATAAGAATCGCAAAGCTCATATCACAAAACTTTGAGATCTCATTTCATCTTTCTTCGATTCTACCTACTCCGATTCAATCGATCTTATCGAGACATGGATGCTCGTAAGAGAGGACGCCCTGAAGCTGCTGCCTCTCACAACTCCAATGGCGGATTCAAGAGGTCTAAGCAAGAGATGGAATCAATTTCAACTGGTTTAGGAAGCAAATCCAAGCCATGCACTAAATTTTTCAGGTTATAAATCTATTTTTTTTCCTGATTGGATCATGAAATTAAGAAGTAATACTGTATAAAGTGTGCTAATGAAGTGGATAGTTGTTATACAGGTACGTAGCACTGTTCATCCTTAAACGAGTTAAAAAGTCAATGTAACAAACTGTGATTCCTCCTAAGAATGGATGATAAGCTTATATGGAGTATAATTTTGGAACTGAACTCTACTGGTGAATCTAATATACAAAATCAACCAAAACTTGTTTTTGTGGCTGTCGTTGTAAACAATTTGTTTATTCTTCTTCTGTTTGATGGTAAGGAAACTGTAATTTTGCATATGCAGCATAAAACCATTGTTCTCAAGTAAGGTTCTTCTTGCATTATCTTTGAACTATCCATGAGTCTTTCGGCTCCTGTGCAACGTGTTGTTCATCGGTGATGCATAATGACTACAATCTGTTTTATTACTTTATAAATTTCTTTCATTATCTTTGTACTAAAACGCTATAGCTTTTTCGAGAAGGTAGCAATAGTGCAACAGCTTGGAGATGTGTCGTTTTGTTCTTTCTCGAATGAATTTGCTGATGCATTATGGTTTGTACTGCAGCACTTCTGGATGTCCATTTGGTGACAATTGCCACTTCTTGCACTATGTGCCCGGTGGGTACAATGCTGCAGCGCAGATGACAAATCTCCGACCACCGGTTTCTCAAGTTTCCAGAAATATGCAAGGATCTGGTGGTCCCGGCGGCAGATTCTCAGGGAGAGGAGATCCAGGATCAGGCCCTGTTTCAATCTTTGGTGCTTCTACTTCCAAGATCAGTGTAGATGCTTCTTTAGCCGGTGCCATCATTGGAAAAGGTGGAATCCATTCCAAACAGATATGCCGTGAAACAGGAGCAAAATTATCGATTAAAGATCATGAAAGAGACCCAAACTTGAAGATTATCGAGCTGGAAGGAACATTTGAACAGATCAATGTAGCGAGTGGGATGGTGAGAGAGCTTATAGGGAGGCTTGGATCAGTGAAGAAACCTCAAGGGATTGGTGGTCCTGAAGGGAAACCACATCCTGGGAGCAACTACAAAACCAAGATCTGTGATAGGTACTCTAAAGGGAACTGTACATATGGAGATAGATGCCATTTTGCTCATGGTGAATCTGAGCTGCGCAGGTCAGGAATCGCTTAGTTATGTCTTTAGACTCTTGAGAACAGATTATGCATTGTTAGCTCCATTATCATTGTGACTTTTTGCTCTCTCTTTTTGTTTTATCAATTTGTTTTATGCGACTCGCTTTGAAAACTTTAGCCCATTCTGTATTGAGCTCTGAAGATTCGACGAGTTCTGTAAGTTACCGATCACAGTTAAAAGACTTTGATATGTTAAAACCCTTATATTACAGCTACATACTATTTTTGTCTT - >AT5G06770.2
TTCCACGAATTAATTTATATTATTAACAAATTAAGCAAACCTCTATCCCCCATTTATATTGTTGAGCTGTGTGTGTGGAGATGATGATGATGATGATAAACCCAATAGAATTTTAAAAGGATAAGAATCGCAAAGCTCATATCACAAAACTTTGAGATCTCATTTCATCTTTCTTCGATTCTACCTACTCCGATTCAATCGATCTTATCGAGACATGGATGCTCGTAAGAGAGGACGCCCTGAAGCTGCTGCCTCTCACAACTCCAATGGCGGATTCAAGAGGTCTAAGCAAGAGATGGAATCAATTTCAACTGGTTTAGGAAGCAAATCCAAGCCATGCACTAAATTTTTCAGGTTATAAATCTATTTTTTTTCCTGATTGGATCATGAAATTAAGAAGTAATACTGTATAAAGTGTGCTAATGAAGTGGATAGTTGTTATACAGGTACGTAGCACTGTTCATCCTTAAACGAGTTAAAAAGTCAATGTAACAAACTGTGATTCCTCCTAAGAATGGATGATAAGCTTATATGGAGTATAATTTTGGAACTGAACTCTACTGGTGAATCTAATATACAAAATCAACCAAAACTTGTTTTTGTGGCTGTCGTTGTAAACAATTTGTTTATTCTTCTTCTGTTTGATGGTAAGGAAACTGTAATTTTGCATATGCAGCATAAAACCATTGTTCTCAAGTAAGGTTCTTCTTGCATTATCTTTGAACTATCCATGAGTCTTTCGGCTCCTGTGCAACGTGTTGTTCATCGGTGATGCATAATGACTACAATCTGTTTTATTACTTTATAAATTTCTTTCATTATCTTTGTACTAAAACGCTATAGCTTTTTCGAGAAGGTAGCAATAGTGCAACAGCTTGGAGATGTGTCGTTTTGTTCTTTCTCGAATGAATTTGCTGATGCATTATGGTTTGTACTGCAGCACTTCTGGATGTCCATTTGGTGACAATTGCCACTTCTTGCACTATGTGCCCGGTGGGTACAATGCTGCAGCGCAGATGACAAATCTCCGACCACCGGTTTCTCAAGTTTCCAGAAATATGCAAGGATCTGGTGGTCCCGGCGGCAGATTCTCAGGGAGAGGAGATCCAGGATCAGGCCCTGTTTCAATCTTTGGTGCTTCTACTTCCAAGATCAGTGTAGATGCTTCTTTAGCCGGTGCCATCATTGGAAAAGGTGGAATCCATTCCAAACAGATATGCCGTGAAACAGGAGCAAAATTATCGATTAAAGATCATGAAAGAGACCCAAACTTGAAGATTATCGAGCTGGAAGGAACATTTGAACAGATCAATGTAGCGAGTGGGATGGTGAGAGAGCTTATAGGGAGGCTTGGATCAGTGAAGAAACCTCAAGGGATTGGTGGTCCTGAAGGGAAACCACATCCTGGGAGCAACTACAAAACCAAGATCTGTGATAGGTACTCTAAAGGGAACTGTACATATGGAGATAGATGCCATTTTGCTCATGGTGAATCTGAGCTGCGCAGGTCAGGAATCGCTTAGTTATGTCTTTAGACTCTTGAGAACAGATTATGCATTGTTAGCTCCATTATCATTGTGACTTTTTGCTCTCTCTTTTTGTTTTATCAATTTGTTTTATGCGACTCGCTTTGAAAACTTTAGCCCATTCTGTATTGAGCTCTGAAGATTCGACGAGTTCTGTAAGTTACCGATCACAGTTAAAAGACTTTGATATGTTAAAACCCTTATATTACAGCTACATACTATTTTTGTCTT - >AT5G06770.5
TTCCACGAATTAATTTATATTATTAACAAATTAAGCAAACCTCTATCCCCCATTTATATTGTTGAGCTGTGTGTGTGGAGATGATGATGATGATGATAAACCCAATAGAATTTTAAAAGGATAAGAATCGCAAAGCTCATATCACAAAACTTTGAGATCTCATTTCATCTTTCTTCGATTCTACCTACTCCGATTCAATCGATCTTATCGAGACATGGATGCTCGTAAGAGAGGACGCCCTGAAGCTGCTGCCTCTCACAACTCCAATGGCGGATTCAAGAGGTCTAAGCAAGAGATGGAATCAATTTCAACTGGTTTAGGAAGCAAATCCAAGCCATGCACTAAATTTTTCAGGTTATAAATCTATTTTTTTTCCTGATTGGATCATGAAATTAAGAAGTAATACTGTATAAAGTGTGCTAATGAAGTGGATAGTTGTTATACAGGTACGTAGCACTGTTCATCCTTAAACGAGTTAAAAAGTCAATGTAACAAACTGTGATTCCTCCTAAGAATGGATGATAAGCTTATATGGAGTATAATTTTGGAACTGAACTCTACTGGTGAATCTAATATACAAAATCAACCAAAACTTGTTTTTGTGGCTGTCGTTGTAAACAATTTGTTTATTCTTCTTCTGTTTGATGGTAAGGAAACTGTAATTTTGCATATGCAGCATAAAACCATTGTTCTCAAGTAAGGTTCTTCTTGCATTATCTTTGAACTATCCATGAGTCTTTCGGCTCCTGTGCAACGTGTTGTTCATCGGTGATGCATAATGACTACAATCTGTTTTATTACTTTATAAATTTCTTTCATTATCTTTGTACTAAAACGCTATAGCTTTTTCGAGAAGGTAGCAATAGTGCAACAGCTTGGAGATGTGTCGTTTTGTTCTTTCTCGAATGAATTTGCTGATGCATTATGGTTTGTACTGCAGCACTTCTGGATGTCCATTTGGTGACAATTGCCACTTCTTGCACTATGTGCCCGGTGGGTACAATGCTGCAGCGCAGATGACAAATCTCCGACCACCGGTTTCTCAAGTTTCCAGAAATATGCAAGGATCTGGTGGTCCCGGCGGCAGATTCTCAGGGAGAGGAGATCCAGGATCAGGCCCTGTTTCAATCTTTGGTGCTTCTACTTCCAAGATCAGTGTAGATGCTTCTTTAGCCGGTGCCATCATTGGAAAAGGTGGAATCCATTCCAAACAGATATGCCGTGAAACAGGAGCAAAATTATCGATTAAAGATCATGAAAGAGACCCAAACTTGAAGATTATCGAGCTGGAAGGAACATTTGAACAGATCAATGTAGCGAGTGGGATGGTGAGAGAGCTTATAGGGAGGCTTGGATCAGTGAAGAAACCTCAAGGGATTGGTGGTCCTGAAGGGAAACCACATCCTGGGAGCAACTACAAAACCAAGATCTGTGATAGGTACTCTAAAGGGAACTGTACATATGGAGATAGATGCCATTTTGCTCATGGTGAATCTGAGCTGCGCAGGTCAGGAATCGCTTAGTTATGTCTTTAGACTCTTGAGAACAGATTATGCATTGTTAGCTCCATTATCATTGTGACTTTTTGCTCTCTCTTTTTGTTTTATCAATTTGTTTTATGCGACTCGCTTTGAAAACTTTAGCCCATTCTGTATTGAGCTCTGAAGATTCGACGAGTTCTGTAAGTTACCGATCACAGTTAAAAGACTTTGATATGTTAAAACCCTTATATTACAGCTACATACTATTTTTGTCTT - >AT5G06770.1
TTCCACGAATTAATTTATATTATTAACAAATTAAGCAAACCTCTATCCCCCATTTATATTGTTGAGCTGTGTGTGTGGAGATGATGATGATGATGATAAACCCAATAGAATTTTAAAAGGATAAGAATCGCAAAGCTCATATCACAAAACTTTGAGATCTCATTTCATCTTTCTTCGATTCTACCTACTCCGATTCAATCGATCTTATCGAGACATGGATGCTCGTAAGAGAGGACGCCCTGAAGCTGCTGCCTCTCACAACTCCAATGGCGGATTCAAGAGGTCTAAGCAAGAGATGGAATCAATTTCAACTGGTTTAGGAAGCAAATCCAAGCCATGCACTAAATTTTTCAGGTTATAAATCTATTTTTTTTCCTGATTGGATCATGAAATTAAGAAGTAATACTGTATAAAGTGTGCTAATGAAGTGGATAGTTGTTATACAGGTACGTAGCACTGTTCATCCTTAAACGAGTTAAAAAGTCAATGTAACAAACTGTGATTCCTCCTAAGAATGGATGATAAGCTTATATGGAGTATAATTTTGGAACTGAACTCTACTGGTGAATCTAATATACAAAATCAACCAAAACTTGTTTTTGTGGCTGTCGTTGTAAACAATTTGTTTATTCTTCTTCTGTTTGATGGTAAGGAAACTGTAATTTTGCATATGCAGCATAAAACCATTGTTCTCAAGTAAGGTTCTTCTTGCATTATCTTTGAACTATCCATGAGTCTTTCGGCTCCTGTGCAACGTGTTGTTCATCGGTGATGCATAATGACTACAATCTGTTTTATTACTTTATAAATTTCTTTCATTATCTTTGTACTAAAACGCTATAGCTTTTTCGAGAAGGTAGCAATAGTGCAACAGCTTGGAGATGTGTCGTTTTGTTCTTTCTCGAATGAATTTGCTGATGCATTATGGTTTGTACTGCAGCACTTCTGGATGTCCATTTGGTGACAATTGCCACTTCTTGCACTATGTGCCCGGTGGGTACAATGCTGCAGCGCAGATGACAAATCTCCGACCACCGGTTTCTCAAGTTTCCAGAAATATGCAAGGATCTGGTGGTCCCGGCGGCAGATTCTCAGGGAGAGGAGATCCAGGATCAGGCCCTGTTTCAATCTTTGGTGCTTCTACTTCCAAGATCAGTGTAGATGCTTCTTTAGCCGGTGCCATCATTGGAAAAGGTGGAATCCATTCCAAACAGATATGCCGTGAAACAGGAGCAAAATTATCGATTAAAGATCATGAAAGAGACCCAAACTTGAAGATTATCGAGCTGGAAGGAACATTTGAACAGATCAATGTAGCGAGTGGGATGGTGAGAGAGCTTATAGGGAGGCTTGGATCAGTGAAGAAACCTCAAGGGATTGGTGGTCCTGAAGGGAAACCACATCCTGGGAGCAACTACAAAACCAAGATCTGTGATAGGTACTCTAAAGGGAACTGTACATATGGAGATAGATGCCATTTTGCTCATGGTGAATCTGAGCTGCGCAGGTCAGGAATCGCTTAGTTATGTCTTTAGACTCTTGAGAACAGATTATGCATTGTTAGCTCCATTATCATTGTGACTTTTTGCTCTCTCTTTTTGTTTTATCAATTTGTTTTATGCGACTCGCTTTGAAAACTTTAGCCCATTCTGTATTGAGCTCTGAAGATTCGACGAGTTCTGTAAGTTACCGATCACAGTTAAAAGACTTTGATATGTTAAAACCCTTATATTACAGCTACATACTATTTTTGTCTT - >AT5G06770.3
TTCCACGAATTAATTTATATTATTAACAAATTAAGCAAACCTCTATCCCCCATTTATATTGTTGAGCTGTGTGTGTGGAGATGATGATGATGATGATAAACCCAATAGAATTTTAAAAGGATAAGAATCGCAAAGCTCATATCACAAAACTTTGAGATCTCATTTCATCTTTCTTCGATTCTACCTACTCCGATTCAATCGATCTTATCGAGACATGGATGCTCGTAAGAGAGGACGCCCTGAAGCTGCTGCCTCTCACAACTCCAATGGCGGATTCAAGAGGTCTAAGCAAGAGATGGAATCAATTTCAACTGGTTTAGGAAGCAAATCCAAGCCATGCACTAAATTTTTCAGGTTATAAATCTATTTTTTTTCCTGATTGGATCATGAAATTAAGAAGTAATACTGTATAAAGTGTGCTAATGAAGTGGATAGTTGTTATACAGGTACGTAGCACTGTTCATCCTTAAACGAGTTAAAAAGTCAATGTAACAAACTGTGATTCCTCCTAAGAATGGATGATAAGCTTATATGGAGTATAATTTTGGAACTGAACTCTACTGGTGAATCTAATATACAAAATCAACCAAAACTTGTTTTTGTGGCTGTCGTTGTAAACAATTTGTTTATTCTTCTTCTGTTTGATGGTAAGGAAACTGTAATTTTGCATATGCAGCATAAAACCATTGTTCTCAAGTAAGGTTCTTCTTGCATTATCTTTGAACTATCCATGAGTCTTTCGGCTCCTGTGCAACGTGTTGTTCATCGGTGATGCATAATGACTACAATCTGTTTTATTACTTTATAAATTTCTTTCATTATCTTTGTACTAAAACGCTATAGCTTTTTCGAGAAGGTAGCAATAGTGCAACAGCTTGGAGATGTGTCGTTTTGTTCTTTCTCGAATGAATTTGCTGATGCATTATGGTTTGTACTGCAGCACTTCTGGATGTCCATTTGGTGACAATTGCCACTTCTTGCACTATGTGCCCGGTGGGTACAATGCTGCAGCGCAGATGACAAATCTCCGACCACCGGTTTCTCAAGTTTCCAGAAATATGCAAGGATCTGGTGGTCCCGGCGGCAGATTCTCAGGGAGAGGAGATCCAGGATCAGGCCCTGTTTCAATCTTTGGTGCTTCTACTTCCAAGATCAGTGTAGATGCTTCTTTAGCCGGTGCCATCATTGGAAAAGGTGGAATCCATTCCAAACAGATATGCCGTGAAACAGGAGCAAAATTATCGATTAAAGATCATGAAAGAGACCCAAACTTGAAGATTATCGAGCTGGAAGGAACATTTGAACAGATCAATGTAGCGAGTGGGATGGTGAGAGAGCTTATAGGGAGGCTTGGATCAGTGAAGAAACCTCAAGGGATTGGTGGTCCTGAAGGGAAACCACATCCTGGGAGCAACTACAAAACCAAGATCTGTGATAGGTACTCTAAAGGGAACTGTACATATGGAGATAGATGCCATTTTGCTCATGGTGAATCTGAGCTGCGCAGGTCAGGAATCGCTTAGTTATGTCTTTAGACTCTTGAGAACAGATTATGCATTGTTAGCTCCATTATCATTGTGACTTTTTGCTCTCTCTTTTTGTTTTATCAATTTGTTTTATGCGACTCGCTTTGAAAACTTTAGCCCATTCTGTATTGAGCTCTGAAGATTCGACGAGTTCTGTAAGTTACCGATCACAGTTAAAAGACTTTGATATGTTAAAACCCTTATATTACAGCTACATACTATTTTTGTCTT - >AT5G06770.6
TTCCACGAATTAATTTATATTATTAACAAATTAAGCAAACCTCTATCCCCCATTTATATTGTTGAGCTGTGTGTGTGGAGATGATGATGATGATGATAAACCCAATAGAATTTTAAAAGGATAAGAATCGCAAAGCTCATATCACAAAACTTTGAGATCTCATTTCATCTTTCTTCGATTCTACCTACTCCGATTCAATCGATCTTATCGAGACATGGATGCTCGTAAGAGAGGACGCCCTGAAGCTGCTGCCTCTCACAACTCCAATGGCGGATTCAAGAGGTCTAAGCAAGAGATGGAATCAATTTCAACTGGTTTAGGAAGCAAATCCAAGCCATGCACTAAATTTTTCAGGTTATAAATCTATTTTTTTTCCTGATTGGATCATGAAATTAAGAAGTAATACTGTATAAAGTGTGCTAATGAAGTGGATAGTTGTTATACAGGTACGTAGCACTGTTCATCCTTAAACGAGTTAAAAAGTCAATGTAACAAACTGTGATTCCTCCTAAGAATGGATGATAAGCTTATATGGAGTATAATTTTGGAACTGAACTCTACTGGTGAATCTAATATACAAAATCAACCAAAACTTGTTTTTGTGGCTGTCGTTGTAAACAATTTGTTTATTCTTCTTCTGTTTGATGGTAAGGAAACTGTAATTTTGCATATGCAGCATAAAACCATTGTTCTCAAGTAAGGTTCTTCTTGCATTATCTTTGAACTATCCATGAGTCTTTCGGCTCCTGTGCAACGTGTTGTTCATCGGTGATGCATAATGACTACAATCTGTTTTATTACTTTATAAATTTCTTTCATTATCTTTGTACTAAAACGCTATAGCTTTTTCGAGAAGGTAGCAATAGTGCAACAGCTTGGAGATGTGTCGTTTTGTTCTTTCTCGAATGAATTTGCTGATGCATTATGGTTTGTACTGCAGCACTTCTGGATGTCCATTTGGTGACAATTGCCACTTCTTGCACTATGTGCCCGGTGGGTACAATGCTGCAGCGCAGATGACAAATCTCCGACCACCGGTTTCTCAAGTTTCCAGAAATATGCAAGGATCTGGTGGTCCCGGCGGCAGATTCTCAGGGAGAGGAGATCCAGGATCAGGCCCTGTTTCAATCTTTGGTGCTTCTACTTCCAAGATCAGTGTAGATGCTTCTTTAGCCGGTGCCATCATTGGAAAAGGTGGAATCCATTCCAAACAGATATGCCGTGAAACAGGAGCAAAATTATCGATTAAAGATCATGAAAGAGACCCAAACTTGAAGATTATCGAGCTGGAAGGAACATTTGAACAGATCAATGTAGCGAGTGGGATGGTGAGAGAGCTTATAGGGAGGCTTGGATCAGTGAAGAAACCTCAAGGGATTGGTGGTCCTGAAGGGAAACCACATCCTGGGAGCAACTACAAAACCAAGATCTGTGATAGGTACTCTAAAGGGAACTGTACATATGGAGATAGATGCCATTTTGCTCATGGTGAATCTGAGCTGCGCAGGTCAGGAATCGCTTAGTTATGTCTTTAGACTCTTGAGAACAGATTATGCATTGTTAGCTCCATTATCATTGTGACTTTTTGCTCTCTCTTTTTGTTTTATCAATTTGTTTTATGCGACTCGCTTTGAAAACTTTAGCCCATTCTGTATTGAGCTCTGAAGATTCGACGAGTTCTGTAAGTTACCGATCACAGTTAAAAGACTTTGATATGTTAAAACCCTTATATTACAGCTACATACTATTTTTGTCTT
CDS Sequence
Protein Sequence